BLASTX nr result

ID: Zingiber24_contig00031350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00031350
         (295 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW79288.1| hypothetical protein ZEAMMB73_186667 [Zea mays]         55   1e-05

>gb|AFW79288.1| hypothetical protein ZEAMMB73_186667 [Zea mays]
          Length = 164

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 41/105 (39%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
 Frame = +2

Query: 8   APGKRAMSTRLGGAGGSGRWITRLRRRIGKTRFRVRIPSPVKIVARIRDAYVEWMLSAAG 187
           A GK+  S +LG  GG      R+RRR+     RV +  P + +AR RDAYV  ML+   
Sbjct: 30  ADGKQPRSRQLGSGGGG----ARVRRRV-----RVLLAGPRRALARARDAYVGGMLALGR 80

Query: 188 KAPA-ALSGS--DAWTKRIPKSG------PAKTSSSAFERRLMFE 295
           +A A AL G+    W KR+P+        PA    + FE+RL+FE
Sbjct: 81  RASALALPGAVEALWAKRVPRHKQQQQQLPAPGKPTEFEQRLIFE 125


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