BLASTX nr result
ID: Zingiber24_contig00031304
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber24_contig00031304 (2205 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004961565.1| PREDICTED: multisubstrate pseudouridine synt... 718 0.0 gb|AFW82437.1| hypothetical protein ZEAMMB73_597944 [Zea mays] 713 0.0 ref|NP_001146470.1| hypothetical protein [Zea mays] gi|219887425... 713 0.0 ref|XP_004961564.1| PREDICTED: multisubstrate pseudouridine synt... 711 0.0 dbj|BAJ90067.1| predicted protein [Hordeum vulgare subsp. vulgare] 708 0.0 gb|EOY11114.1| Pseudouridine synthase family protein isoform 2 [... 707 0.0 ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt... 699 0.0 ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric... 696 0.0 ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Popu... 695 0.0 ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synt... 693 0.0 ref|XP_003568149.1| PREDICTED: pseudouridylate synthase 7 homolo... 692 0.0 gb|EOY11113.1| Pseudouridine synthase family protein, putative i... 691 0.0 emb|CBI34194.3| unnamed protein product [Vitis vinifera] 689 0.0 ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g... 687 0.0 gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus no... 687 0.0 ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synt... 686 0.0 ref|XP_004494684.1| PREDICTED: multisubstrate pseudouridine synt... 684 0.0 ref|XP_006604840.1| PREDICTED: multisubstrate pseudouridine synt... 678 0.0 ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C... 678 0.0 ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synt... 678 0.0 >ref|XP_004961565.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X2 [Setaria italica] Length = 685 Score = 718 bits (1853), Expect = 0.0 Identities = 372/622 (59%), Positives = 453/622 (72%), Gaps = 16/622 (2%) Frame = +2 Query: 5 DKDYTSVIESFRLLCGEADADALKEFIAKVLSL-ERDVPPVMLAPDPDKSHRAEVHNFFK 181 D D++ +ESFR LCG+AD DAL+ + +V + + DV PV+L+PD DK+HR+EVHNFFK Sbjct: 72 DADHSQALESFRALCGDADCDALRGLLERVAAGGDGDVSPVILSPDADKAHRSEVHNFFK 131 Query: 182 KNFKFLVTDTVEESGENSKYIRVRRCSGNGGGPS------KRGMKRXXXXXX------PF 325 KNFKFLVTDTVE S + IRVR SG GGG +G KR PF Sbjct: 132 KNFKFLVTDTVEHSDGIQRCIRVRLGSGAGGGRGCGGGGRGKGRKRKNMGGSDWRDDRPF 191 Query: 326 DSRGSKSWPEHLGKFLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQR 505 DSRGS +W + +GKFLRF+LYKENKDTQEALG+IGKMLG+ RSFGFAGTKDKR+V+ Q+ Sbjct: 192 DSRGSSNWSDSVGKFLRFHLYKENKDTQEALGIIGKMLGLQPRSFGFAGTKDKRAVTLQQ 251 Query: 506 VTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKE 685 VT+FK +A RL+ LN+R+FGIKVG+FCYV EGLVLGQL GN FTITLRG+ A+SED+IK Sbjct: 252 VTVFKVQANRLAALNNRLFGIKVGNFCYVKEGLVLGQLMGNQFTITLRGVIAESEDVIKA 311 Query: 686 ATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAR 865 A D L +NGFINYYGLQRFGSGS+PTHLVGAALL+GEWK A +LILDPREGER + E R Sbjct: 312 AADGLGKNGFINYYGLQRFGSGSIPTHLVGAALLRGEWKAAVNLILDPREGERDDINEVR 371 Query: 866 EYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYL 1045 ++YKEHGD+D L+ PRHLVAER+ILQCLKK PGNYLQALK IPRTLRMMYVHSYQSYL Sbjct: 372 KHYKEHGDIDKALRNFPRHLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYL 431 Query: 1046 WNHAASMRVQKYGISQVVLGDLVLCKEVLPTVCDSSE-HEXXXXXXXXXXXXXXXXXXXX 1222 WNHAASMRV+KYG+SQVV GDLV KE P S + E Sbjct: 432 WNHAASMRVEKYGMSQVVEGDLVYNKESPPEESTSVDIAETDDGHTNSSEIDLCSEAQPE 491 Query: 1223 XXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVH 1402 +Q VK VDS DLLKG YTF+DVVLPLPGS+ +P N++A +YH++AKKDGI+L E+ H Sbjct: 492 ETIQSVKIVDSGDLLKGMYTFDDVVLPLPGSQAMFPGNEVAEIYHEMAKKDGISLMENAH 551 Query: 1403 GAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEVHVD 1582 G KEFSI+SMKG YR+VFQRPIDF WEL+ YT+D+ LAETDL++L + NE+ Sbjct: 552 GVKEFSITSMKGGYRRVFQRPIDFQWELMTYTDDSSSLAETDLDVLSRIKPKEANEL--- 608 Query: 1583 GICSSQIRTSDTENSIGMHLDEDSNENPLSTIET--INSSDILSKKQALKMAFTLPTSCY 1756 + T +++ + D + N ++E S D +K A+K+ FTLP SCY Sbjct: 609 ------VTTDQSQDKLEKDSDTSTPTNGSDSLENKPTGSPDTAPRKMAIKLVFTLPASCY 662 Query: 1757 ATMAIREILKSSTSVSYHKALN 1822 ATMAIRE+LK+STSV+Y K L+ Sbjct: 663 ATMAIRELLKTSTSVAYQKTLS 684 >gb|AFW82437.1| hypothetical protein ZEAMMB73_597944 [Zea mays] Length = 653 Score = 713 bits (1840), Expect = 0.0 Identities = 378/623 (60%), Positives = 449/623 (72%), Gaps = 17/623 (2%) Frame = +2 Query: 5 DKDYTSVIESFRLLCGEADADALKEFIAKVLSLER-DVPPVMLAPDPDKSHRAEVHNFFK 181 + D++ +ESFR LCG+AD +AL+ + KV DV PV+L+PD DK+HR+EVHNFFK Sbjct: 43 EADHSQALESFRSLCGDADCNALRGLLEKVSGEGGGDVSPVILSPDADKAHRSEVHNFFK 102 Query: 182 KNFKFLVTDTVEESGENSKYIRVRRCS----GNGGGPSKRGMKRXXXXXX------PFDS 331 K FKFLVTDTVE S K IRVR S G G G RG KR PFDS Sbjct: 103 KTFKFLVTDTVEHSDGVQKCIRVRFGSEAGVGRGAGGRGRGRKRKNMGSSDWRDGRPFDS 162 Query: 332 RGSKSWPEHLGKFLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVT 511 RGS +WP+++GKFLRF+LYKENKDTQEALG+IGKMLG+ RSFGFAGTKDKR+V+TQ+VT Sbjct: 163 RGSSNWPDNVGKFLRFHLYKENKDTQEALGVIGKMLGLQPRSFGFAGTKDKRAVTTQQVT 222 Query: 512 IFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEAT 691 +FK +A +L LN R+FGIKVG+FCYV EGLVLGQLTGN FTITLRG++A+SED+IK A Sbjct: 223 VFKVQASKLLALNKRLFGIKVGNFCYVKEGLVLGQLTGNRFTITLRGVTAESEDMIKIAV 282 Query: 692 DSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREY 871 D L +NGFINYYGLQRFGSGS+PTHLVGAALL+GEWK A +LILDPREGER + E R+ Sbjct: 283 DGLGKNGFINYYGLQRFGSGSIPTHLVGAALLRGEWKVAVNLILDPREGERDDINEVRKR 342 Query: 872 YKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWN 1051 YKEHGD+D+ L+ PRHLVAER+ILQCLKK PGN+LQALK IPRTLRMMYVHSYQSYLWN Sbjct: 343 YKEHGDIDMALRNFPRHLVAERAILQCLKKCPGNHLQALKGIPRTLRMMYVHSYQSYLWN 402 Query: 1052 HAASMRVQKYGISQVVLGDLVLCKEVLPTVCDSSEH------EXXXXXXXXXXXXXXXXX 1213 HAASMRV+KYGISQVV GDLV KE C S E E Sbjct: 403 HAASMRVEKYGISQVVEGDLVYNKE-----CPSEESTSVDILETDDDHTNSIEIDLCSEA 457 Query: 1214 XXXXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTE 1393 +Q K VDS D KG YTF+DVVLPLPGS+ +P N+IA +YH++A+KDGI+LTE Sbjct: 458 QPEESIQSAKIVDSGDFTKGIYTFDDVVLPLPGSQALFPGNEIAEIYHEMARKDGISLTE 517 Query: 1394 SVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEV 1573 + HG KEFSI+SMKG YR+VFQRPI F WEL+ YT+D LAETDL++L + NE Sbjct: 518 NAHGVKEFSITSMKGGYRRVFQRPIGFEWELITYTDDTSSLAETDLDVLSRTKPKEANE- 576 Query: 1574 HVDGICSSQIRTSDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLPTSC 1753 + S Q E + + + N S + I S DI KK ALK+AFTLPTSC Sbjct: 577 ----LISKQESQDKLEKAPDTSVPTNGNS---SQEKLIGSPDIRPKKLALKLAFTLPTSC 629 Query: 1754 YATMAIREILKSSTSVSYHKALN 1822 YATMAIRE+LK+STSV+Y K L+ Sbjct: 630 YATMAIRELLKTSTSVAYQKTLS 652 >ref|NP_001146470.1| hypothetical protein [Zea mays] gi|219887425|gb|ACL54087.1| unknown [Zea mays] gi|413949796|gb|AFW82445.1| hypothetical protein ZEAMMB73_396305 [Zea mays] Length = 682 Score = 713 bits (1840), Expect = 0.0 Identities = 378/623 (60%), Positives = 449/623 (72%), Gaps = 17/623 (2%) Frame = +2 Query: 5 DKDYTSVIESFRLLCGEADADALKEFIAKVLSLER-DVPPVMLAPDPDKSHRAEVHNFFK 181 + D++ +ESFR LCG+AD +AL+ + KV DV PV+L+PD DK+HR+EVHNFFK Sbjct: 72 EADHSQALESFRSLCGDADCNALRGLLEKVSGEGGGDVSPVILSPDADKAHRSEVHNFFK 131 Query: 182 KNFKFLVTDTVEESGENSKYIRVRRCS----GNGGGPSKRGMKRXXXXXX------PFDS 331 K FKFLVTDTVE S K IRVR S G G G RG KR PFDS Sbjct: 132 KTFKFLVTDTVEHSDGVQKCIRVRFGSEAGVGRGAGGRGRGRKRKNMGSSDWRDGRPFDS 191 Query: 332 RGSKSWPEHLGKFLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVT 511 RGS +WP+++GKFLRF+LYKENKDTQEALG+IGKMLG+ RSFGFAGTKDKR+V+TQ+VT Sbjct: 192 RGSSNWPDNVGKFLRFHLYKENKDTQEALGVIGKMLGLQPRSFGFAGTKDKRAVTTQQVT 251 Query: 512 IFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEAT 691 +FK +A +L LN R+FGIKVG+FCYV EGLVLGQLTGN FTITLRG++A+SED+IK A Sbjct: 252 VFKVQASKLLALNKRLFGIKVGNFCYVKEGLVLGQLTGNRFTITLRGVTAESEDMIKIAV 311 Query: 692 DSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREY 871 D L +NGFINYYGLQRFGSGS+PTHLVGAALL+GEWK A +LILDPREGER + E R+ Sbjct: 312 DGLGKNGFINYYGLQRFGSGSIPTHLVGAALLRGEWKVAVNLILDPREGERDDINEVRKR 371 Query: 872 YKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWN 1051 YKEHGD+D+ L+ PRHLVAER+ILQCLKK PGN+LQALK IPRTLRMMYVHSYQSYLWN Sbjct: 372 YKEHGDIDMALRNFPRHLVAERAILQCLKKCPGNHLQALKGIPRTLRMMYVHSYQSYLWN 431 Query: 1052 HAASMRVQKYGISQVVLGDLVLCKEVLPTVCDSSEH------EXXXXXXXXXXXXXXXXX 1213 HAASMRV+KYGISQVV GDLV KE C S E E Sbjct: 432 HAASMRVEKYGISQVVEGDLVYNKE-----CPSEESTSVDILETDDDHTNSIEIDLCSEA 486 Query: 1214 XXXXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTE 1393 +Q K VDS D KG YTF+DVVLPLPGS+ +P N+IA +YH++A+KDGI+LTE Sbjct: 487 QPEESIQSAKIVDSGDFTKGIYTFDDVVLPLPGSQALFPGNEIAEIYHEMARKDGISLTE 546 Query: 1394 SVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEV 1573 + HG KEFSI+SMKG YR+VFQRPI F WEL+ YT+D LAETDL++L + NE Sbjct: 547 NAHGVKEFSITSMKGGYRRVFQRPIGFEWELITYTDDTSSLAETDLDVLSRTKPKEANE- 605 Query: 1574 HVDGICSSQIRTSDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLPTSC 1753 + S Q E + + + N S + I S DI KK ALK+AFTLPTSC Sbjct: 606 ----LISKQESQDKLEKAPDTSVPTNGNS---SQEKLIGSPDIRPKKLALKLAFTLPTSC 658 Query: 1754 YATMAIREILKSSTSVSYHKALN 1822 YATMAIRE+LK+STSV+Y K L+ Sbjct: 659 YATMAIRELLKTSTSVAYQKTLS 681 >ref|XP_004961564.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1 [Setaria italica] Length = 686 Score = 711 bits (1835), Expect = 0.0 Identities = 369/615 (60%), Positives = 448/615 (72%), Gaps = 16/615 (2%) Frame = +2 Query: 5 DKDYTSVIESFRLLCGEADADALKEFIAKVLSL-ERDVPPVMLAPDPDKSHRAEVHNFFK 181 D D++ +ESFR LCG+AD DAL+ + +V + + DV PV+L+PD DK+HR+EVHNFFK Sbjct: 72 DADHSQALESFRALCGDADCDALRGLLERVAAGGDGDVSPVILSPDADKAHRSEVHNFFK 131 Query: 182 KNFKFLVTDTVEESGENSKYIRVRRCSGNGGGPS------KRGMKRXXXXXX------PF 325 KNFKFLVTDTVE S + IRVR SG GGG +G KR PF Sbjct: 132 KNFKFLVTDTVEHSDGIQRCIRVRLGSGAGGGRGCGGGGRGKGRKRKNMGGSDWRDDRPF 191 Query: 326 DSRGSKSWPEHLGKFLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQR 505 DSRGS +W + +GKFLRF+LYKENKDTQEALG+IGKMLG+ RSFGFAGTKDKR+V+ Q+ Sbjct: 192 DSRGSSNWSDSVGKFLRFHLYKENKDTQEALGIIGKMLGLQPRSFGFAGTKDKRAVTLQQ 251 Query: 506 VTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKE 685 VT+FK +A RL+ LN+R+FGIKVG+FCYV EGLVLGQL GN FTITLRG+ A+SED+IK Sbjct: 252 VTVFKVQANRLAALNNRLFGIKVGNFCYVKEGLVLGQLMGNQFTITLRGVIAESEDVIKA 311 Query: 686 ATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAR 865 A D L +NGFINYYGLQRFGSGS+PTHLVGAALL+GEWK A +LILDPREGER + E R Sbjct: 312 AADGLGKNGFINYYGLQRFGSGSIPTHLVGAALLRGEWKAAVNLILDPREGERDDINEVR 371 Query: 866 EYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYL 1045 ++YKEHGD+D L+ PRHLVAER+ILQCLKK PGNYLQALK IPRTLRMMYVHSYQSYL Sbjct: 372 KHYKEHGDIDKALRNFPRHLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYL 431 Query: 1046 WNHAASMRVQKYGISQVVLGDLVLCKEVLPTVCDSSE-HEXXXXXXXXXXXXXXXXXXXX 1222 WNHAASMRV+KYG+SQVV GDLV KE P S + E Sbjct: 432 WNHAASMRVEKYGMSQVVEGDLVYNKESPPEESTSVDIAETDDGHTNSSEIDLCSEAQPE 491 Query: 1223 XXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVH 1402 +Q VK VDS DLLKG YTF+DVVLPLPGS+ +P N++A +YH++AKKDGI+L E+ H Sbjct: 492 ETIQSVKIVDSGDLLKGMYTFDDVVLPLPGSQAMFPGNEVAEIYHEMAKKDGISLMENAH 551 Query: 1403 GAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEVHVD 1582 G KEFSI+SMKG YR+VFQRPIDF WEL+ YT+D+ LAETDL++L + NE+ Sbjct: 552 GVKEFSITSMKGGYRRVFQRPIDFQWELMTYTDDSSSLAETDLDVLSRIKPKEANEL--- 608 Query: 1583 GICSSQIRTSDTENSIGMHLDEDSNENPLSTIET--INSSDILSKKQALKMAFTLPTSCY 1756 + T +++ + D + N ++E S D +K A+K+ FTLP SCY Sbjct: 609 ------VTTDQSQDKLEKDSDTSTPTNGSDSLENKPTGSPDTAPRKMAIKLVFTLPASCY 662 Query: 1757 ATMAIREILKSSTSV 1801 ATMAIRE+LK+STSV Sbjct: 663 ATMAIRELLKTSTSV 677 >dbj|BAJ90067.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 700 Score = 708 bits (1828), Expect = 0.0 Identities = 370/629 (58%), Positives = 452/629 (71%), Gaps = 23/629 (3%) Frame = +2 Query: 5 DKDYTSVIESFRLLCGEADADALKEFIAKVLSL-ERDVPPVMLAPDPDKSHRAEVHNFFK 181 D D++ +ESF LCGEAD AL+ + KV + E + PVML+PD DK+HR+EVHNFFK Sbjct: 72 DADHSKALESFSGLCGEADCRALRGLLEKVAAGGEGEFSPVMLSPDADKAHRSEVHNFFK 131 Query: 182 KNFKFLVTDTVEESGENSKYIRVRRCSGNGGGPSK--------------RGMKRXXXXXX 319 KNFKFLVTDTVE S KYIRVR S GGG + RG KR Sbjct: 132 KNFKFLVTDTVEHSDGVQKYIRVRVGSEAGGGRGRGGGGRGGGGRGGGGRGRKRKNMNGS 191 Query: 320 ------PFDSRGSKSWPEHLGKFLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKD 481 PFDSRGS SWP H GKFLRF+L KENKDTQ+ALG+IGKMLG+ RSFGF+GTKD Sbjct: 192 DWGDDRPFDSRGSSSWPAHAGKFLRFHLCKENKDTQDALGVIGKMLGLQSRSFGFSGTKD 251 Query: 482 KRSVSTQRVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISA 661 KR+V+TQ+VT+FK A +++ LN R++GIKVG+FCYV EGL LGQL GN FTITLRG+ A Sbjct: 252 KRAVTTQQVTVFKVPANKIAALNKRLYGIKVGNFCYVKEGLGLGQLMGNRFTITLRGVVA 311 Query: 662 DSEDIIKEATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGE 841 +SED+IK A D L +NGFINYYGLQRFGSGSVPTHL+GAALL+GEWK+A L+LDPREGE Sbjct: 312 ESEDMIKAAVDGLGKNGFINYYGLQRFGSGSVPTHLIGAALLRGEWKSAVHLVLDPREGE 371 Query: 842 RPIVREAREYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMY 1021 R ++E RE+YK+HGD+D+ L+ PRHLVAE++ILQCL+K PGNYLQALK IPR LRMMY Sbjct: 372 RDDIKEVREHYKQHGDIDMALRNFPRHLVAEKAILQCLRKCPGNYLQALKGIPRPLRMMY 431 Query: 1022 VHSYQSYLWNHAASMRVQKYGISQVVLGDLVLCKEVLPTVCDSSEHEXXXXXXXXXXXXX 1201 VH+YQSYLWNHAASMRV+KYGISQV+ GDLV KE P S Sbjct: 432 VHAYQSYLWNHAASMRVEKYGISQVIEGDLVYTKESHPGEATSVGTSEVDSLTNASEIDI 491 Query: 1202 XXXXXXXXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGI 1381 +Q VK VDSEDL KG Y+FEDVVLPLPGS+ +P N++A +YH++AKKDGI Sbjct: 492 CLEALPEENIQSVKLVDSEDLTKGIYSFEDVVLPLPGSQALFPGNEVAQIYHEMAKKDGI 551 Query: 1382 TLTESVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMT 1561 +LTE+ HG KEFSI+SMKG YR+VFQ+PIDF WEL+ YT+D+ LAETDL+IL K +T Sbjct: 552 SLTENAHGVKEFSITSMKGGYRRVFQKPIDFEWELMTYTDDSASLAETDLDILSK-GKLT 610 Query: 1562 QNEVHVDGICSSQIRTSDTENSIGMHLDEDSNENPLSTIE--TINSSDILSKKQALKMAF 1735 + +V + S ++ + + L+ + S +E +I SSD L K A+K+AF Sbjct: 611 EAKVANEPAPSGNSASNPPDCKLEEPLETSMPTSETSLVENKSIGSSDTLPSKLAVKLAF 670 Query: 1736 TLPTSCYATMAIREILKSSTSVSYHKALN 1822 TLP S YATMAIRE+LK STSV+Y K L+ Sbjct: 671 TLPASSYATMAIRELLKDSTSVAYQKTLD 699 >gb|EOY11114.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao] Length = 732 Score = 707 bits (1826), Expect = 0.0 Identities = 371/625 (59%), Positives = 450/625 (72%), Gaps = 19/625 (3%) Frame = +2 Query: 5 DKDYTSVIESFRLLCGEADADALKEFIAKVLS-LERDVPPVMLAPDPDKSHRAEVHNFFK 181 +K Y S I FR L G+ DAD L+ FI ++ S E D+ P++L+PD DKSHR +HNFFK Sbjct: 110 NKCYASEIIKFRSLAGDTDADRLEAFINQITSGSEEDICPIVLSPDSDKSHRTAMHNFFK 169 Query: 182 KNFKFLVTDTVEESGENSKYIRVRRCSGNGGGPSKRGMKRXXXXXXPFDSRGSKSWPEHL 361 +N +FLVTDTV+ +SK IRVR SGN + KR P+DSRGS WPEHL Sbjct: 170 ENLRFLVTDTVDGPDSSSKCIRVRLNSGNNN-KGRNSKKRKERGDKPYDSRGSSHWPEHL 228 Query: 362 GKFLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLS 541 GKFLRF+LYKENKDTQEALGLIGKMLG+ RSFGFAGTKDKRSVSTQRVT+FKQ A RL+ Sbjct: 229 GKFLRFHLYKENKDTQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLA 288 Query: 542 ELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFIN 721 LN R+ GIKVGDFCYV + +LGQL GN FTI LRGI ADSE+ IK + +SL R+GFIN Sbjct: 289 ALNERLIGIKVGDFCYVKDDFLLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFIN 348 Query: 722 YYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLT 901 Y+GLQRFGSGS+PTH +GA LL+GEW+ AAS ILDPREGER V +AREYYKE GD++ T Sbjct: 349 YFGLQRFGSGSIPTHRIGATLLRGEWQAAASTILDPREGERDFVSKAREYYKETGDIEGT 408 Query: 902 LKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKY 1081 L++LPRHLVAER++LQCLKK PGNYLQALK IPRTLRMMYVHSYQSYLWNHAASMRV+KY Sbjct: 409 LRQLPRHLVAERAMLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVEKY 468 Query: 1082 GISQVVLGDLVLCK-------EVLPTVCDSSEHEXXXXXXXXXXXXXXXXXXXXXXVQFV 1240 G ++VVLGDLV CK +V+P+ + + E V Sbjct: 469 GSNEVVLGDLVYCKGNDAEKVKVVPSEHEDNNFEDAYDCSQLDEISGTDLPEGKN--NLV 526 Query: 1241 KAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFS 1420 KA+ + D+ G+YT EDVVLP+PGSRI YP NDIANVYHD+AKKDGI+LTESVH KEFS Sbjct: 527 KAITAADISTGNYTIEDVVLPMPGSRIIYPVNDIANVYHDMAKKDGISLTESVHNIKEFS 586 Query: 1421 ISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKA--ANMTQNEVHVDGICS 1594 I+SM G+YR+VFQ+PIDF WEL+ YT+ ++ L+ETDL+ + K N+ + E DG Sbjct: 587 ITSMTGSYRRVFQKPIDFEWELLSYTDGSIALSETDLDKIAKTKPVNLVKEEKPTDGTEG 646 Query: 1595 S---------QIRTSDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLPT 1747 + D + S G E S E I ++ S+ L ++ALK+AFTLP Sbjct: 647 QDSSDHMEHIESFEDDKKFSTGNVEVEGSREAEPPQIHSLPESNSLGTQKALKLAFTLPA 706 Query: 1748 SCYATMAIREILKSSTSVSYHKALN 1822 SCYATMAIRE+LK+STSV++HK LN Sbjct: 707 SCYATMAIRELLKTSTSVAFHKTLN 731 >ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis vinifera] Length = 694 Score = 699 bits (1805), Expect = 0.0 Identities = 371/626 (59%), Positives = 443/626 (70%), Gaps = 20/626 (3%) Frame = +2 Query: 5 DKDYTSVIESFRLLCGEADADALKEFIAKVLS-LERDVPPVMLAPDPDKSHRAEVHNFFK 181 +K Y S IE FR L G++D + LK I +V S +E V P++L+ DKSHR VHNFFK Sbjct: 68 NKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSHRTAVHNFFK 127 Query: 182 KNFKFLVTDTVEESGENSKYIRVRRCSGNGGGPSKRGMKRXXXXXXPFDSRGSKSWPEHL 361 +N KFLVTDT++ +SK IRVR SG + KR PFDSRGS +W EH+ Sbjct: 128 ENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRRDKPFDSRGSDNWSEHV 187 Query: 362 GKFLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLS 541 GKFLRF+LYKENKDTQEA+GLIGKMLG+ RSFGFAGTKDKRSVSTQRVT+FKQ A RL+ Sbjct: 188 GKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHANRLA 247 Query: 542 ELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFIN 721 LN R+ GIKVGDFC+V EGLVLGQL GN FTITLRG+ ADSE+ IK + D+L R GFIN Sbjct: 248 ALNERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEETIKASADALGRLGFIN 307 Query: 722 YYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLT 901 Y+GLQRFGSGSVPTHL+GAALL+GEW+TA SLILDPREGER +R+AREYYKE D++ T Sbjct: 308 YFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGERDAIRKAREYYKESDDIEGT 367 Query: 902 LKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKY 1081 L++ PRHLVAER+ILQCLKK+PGNYLQALK IPRTLRMMYVHSYQSYLWNHAASMRVQ Y Sbjct: 368 LRQFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQNY 427 Query: 1082 GISQVVLGDLVLCK----EVLPTVCDSSEHEXXXXXXXXXXXXXXXXXXXXXXVQF--VK 1243 G QVVLGDLV CK E + V +S + + VK Sbjct: 428 GTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPEERNDPVK 487 Query: 1244 AVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSI 1423 A+D+EDLL G+YT +DVVLPLPGSR YPTNDIA VYHD AKKD I+LTES H KEFSI Sbjct: 488 ALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSI 547 Query: 1424 SSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETD---------LNILEKAANMTQNEVH 1576 ++M G +R+VFQ+PIDF WEL+ YT N+PLAETD NI+ + NE Sbjct: 548 TNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGEDSRNGNEKE 607 Query: 1577 VDGICSSQIRTSDTENSIGMHLDEDS----NENPLSTIETINSSDILSKKQALKMAFTLP 1744 C Q + E+++ + D + E L +E S ++ALK++FTLP Sbjct: 608 NSFQCMKQ--SESFEHNVNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKLSFTLP 665 Query: 1745 TSCYATMAIREILKSSTSVSYHKALN 1822 SCYATMAIRE+LK+STSV++ K LN Sbjct: 666 ASCYATMAIRELLKTSTSVAFQKTLN 691 >ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis] gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase d, putative [Ricinus communis] Length = 753 Score = 696 bits (1797), Expect = 0.0 Identities = 365/633 (57%), Positives = 450/633 (71%), Gaps = 28/633 (4%) Frame = +2 Query: 8 KDYTSVIESFRLLCGEADADALKEFIAKVLSLER--DVPPVMLAPDPDKSHRAEVHNFFK 181 K+Y + IESFR L G+AD L+ FI +V+S + ++ P++L+PD DK+HR HNFFK Sbjct: 120 KNYAAEIESFRELAGDADTQRLEAFINQVISEDNCINISPILLSPDSDKAHRTATHNFFK 179 Query: 182 KNFKFLVTDTVEESGENSKYIRVRRCS-GNGGGPSKRGMKRXXXXXXPFDSRGSKSWPEH 358 + KFLVTDTV+ +SK IRVR S GN ++ KR PFDSRGS WPEH Sbjct: 180 EKLKFLVTDTVDGPDASSKCIRVRLNSRGNINEGNRNSKKRKDRNDKPFDSRGSDHWPEH 239 Query: 359 LGKFLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRL 538 LGKFLRF+LYKENKDTQEA+GLIGKMLG+ RSFGFAGTKDKRSVSTQRVT+FKQ A RL Sbjct: 240 LGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRL 299 Query: 539 SELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFI 718 + LN R+ GIKVGDFCYVNEGL+LGQL GN FT+TLRG+ ADSED IK + DSL R+GFI Sbjct: 300 AALNDRLIGIKVGDFCYVNEGLLLGQLLGNRFTVTLRGVVADSEDTIKGSADSLGRHGFI 359 Query: 719 NYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPI-------VREAREYYK 877 NY+GLQRFGSGSVPTHL+GAALL+GEWK A S+ILDPREG+ + +R AREYYK Sbjct: 360 NYFGLQRFGSGSVPTHLIGAALLRGEWKYAVSMILDPREGDILLLVICFMWMRMAREYYK 419 Query: 878 EHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHA 1057 E D+D TL++LPR+L AER++LQCLKK PGNYLQALK IPRTLRMMYVHSYQSYLWNHA Sbjct: 420 ESDDIDGTLRQLPRYLTAERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHA 479 Query: 1058 ASMRVQKYGISQVVLGDLVLCK------EV--LPTVCDSSE-HEXXXXXXXXXXXXXXXX 1210 ASMRVQKYG QVV+GDLV CK E+ + C+ + + Sbjct: 480 ASMRVQKYGTDQVVVGDLVYCKGDDTEREIGSANSACEDDDCEDMYGCSNLDETSGTDLS 539 Query: 1211 XXXXXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLT 1390 V+ +AV++EDL G+YT DV+LP+PGSR+ YPTNDIA VYHDLA+KD I L Sbjct: 540 ERKDTLVKVEQAVNAEDLSTGNYTINDVILPMPGSRVSYPTNDIAKVYHDLAEKDAINLA 599 Query: 1391 ESVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANM---- 1558 ESVH AKEFSI+SM G+YR+VFQ+P+DF WE++ YT+ PLAETD+ L KA ++ Sbjct: 600 ESVHSAKEFSITSMTGSYRRVFQKPMDFEWEILSYTDGTTPLAETDMEKLAKAKSIELNK 659 Query: 1559 ----TQNEVHVDGICSSQIRTSDTENSIGMHLD-EDSNENPLSTIETINSSDILSKKQAL 1723 +N+ C Q +S + + + E E ++ +E + + + AL Sbjct: 660 EEETKKNDTKSPSDCMRQPMSSGNDLHLSAEYNREGEREVEVAKVEPLYGPNTRGAQTAL 719 Query: 1724 KMAFTLPTSCYATMAIREILKSSTSVSYHKALN 1822 K+ FTLP SCYATMAIRE+LK+STSV++HK LN Sbjct: 720 KLTFTLPASCYATMAIRELLKTSTSVAFHKTLN 752 >ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa] gi|550338143|gb|ERP60572.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa] Length = 752 Score = 695 bits (1794), Expect = 0.0 Identities = 359/628 (57%), Positives = 443/628 (70%), Gaps = 21/628 (3%) Frame = +2 Query: 2 DDKDYTSVIESFRLLCGEADADALKEFIAKVLSL---ERDVPPVMLAPDPDKSHRAEVHN 172 + K Y + IE FR L G++DA+ L+ I++V S E VP ++L+PD DK+HR VHN Sbjct: 124 ESKSYEAEIELFRSLAGDSDAEKLESLISQVDSCTGSEDSVPHIVLSPDSDKTHRTAVHN 183 Query: 173 FFKKNFKFLVTDTVEESGENSKYIRVRRCSGNGGGPSKRGMKRXXXXXXPFDSRGSKSWP 352 FFK+NFKFLVTDT + +SK IRVR SG + KR PFDSRGS +WP Sbjct: 184 FFKQNFKFLVTDTTDGPDASSKCIRVRLDSGGHKNNGRNSKKRKERGEKPFDSRGSSNWP 243 Query: 353 EHLGKFLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAK 532 EHLGKFLRF+LYKENKDTQEALG+IGKMLG+ +SFGFAGTKDKR+VSTQRVT+FKQ+A Sbjct: 244 EHLGKFLRFHLYKENKDTQEALGIIGKMLGIQSKSFGFAGTKDKRAVSTQRVTVFKQQAS 303 Query: 533 RLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNG 712 RL+ LN R+ GIKVGDFC+V EGL+LG+L GN FT+TLRG+ ADSED IK A DSL R+G Sbjct: 304 RLAALNDRLIGIKVGDFCHVKEGLLLGRLLGNRFTVTLRGVIADSEDTIKAAADSLGRHG 363 Query: 713 FINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGE-----RPIVREAREYYK 877 FINY+GLQRFG+GSVPTHL+GAALL+GEWKTA S+ILDPREG+ ++R+AREYYK Sbjct: 364 FINYFGLQRFGTGSVPTHLIGAALLRGEWKTAVSMILDPREGDILLLFPYVIRKAREYYK 423 Query: 878 EHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHA 1057 E D++ TL++LPRHLVAER++LQCLKK PG+YLQA+K IPRTLRMMYVH YQSYLWNHA Sbjct: 424 ESNDIEGTLRQLPRHLVAERAVLQCLKKCPGDYLQAMKAIPRTLRMMYVHGYQSYLWNHA 483 Query: 1058 ASMRVQKYGISQVVLGDLVLCK------EVLPTVCDSSEHEXXXXXXXXXXXXXXXXXXX 1219 AS RVQKYG QV+LGDLV CK E + + ++ Sbjct: 484 ASERVQKYGFDQVLLGDLVYCKGDDSEKETVGVNSECNDDNCDDTYDCSHLDETSGTDLL 543 Query: 1220 XXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESV 1399 VK V ED+ G+YT +DVVLP+PGSR+ +PTN+IA VYHDLAKKD I LTESV Sbjct: 544 ERKNTLVKVVTVEDMSTGNYTVDDVVLPMPGSRVIFPTNEIAKVYHDLAKKDAINLTESV 603 Query: 1400 HGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEVHV 1579 H KEFSI+SM G+YR+VFQ+P+DF WEL+ Y + N PLAETDL+ + K + + Sbjct: 604 HRVKEFSITSMTGSYRRVFQKPLDFEWELLTYNDSNKPLAETDLDKISKTGSTNIIKQEE 663 Query: 1580 DGICSSQIRTSD-------TENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFT 1738 G SD + NSI + D + E ++ S+ + ALK++ T Sbjct: 664 QGKGDEDNDLSDCTKLPVCSRNSIALSSDTNEESEREVESEQVSGSNWQETQMALKLSLT 723 Query: 1739 LPTSCYATMAIREILKSSTSVSYHKALN 1822 LP SCYATMAIRE+LK+STSV+YHK LN Sbjct: 724 LPASCYATMAIRELLKTSTSVAYHKTLN 751 >ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1 [Citrus sinensis] Length = 739 Score = 693 bits (1789), Expect = 0.0 Identities = 367/626 (58%), Positives = 445/626 (71%), Gaps = 20/626 (3%) Frame = +2 Query: 5 DKDYTSVIESFRLLCGEADADALKEFIAKVLS--LERDVPPVMLAPDPDKSHRAEVHNFF 178 ++ Y S IESFR L G++DA L+ I +V S E +PP++L+ + DKSHR +HNFF Sbjct: 114 NRSYASEIESFRSLAGDSDAQCLETLINQVTSGKNEDSIPPIVLSANSDKSHRTAIHNFF 173 Query: 179 KKNFKFLVTDTVEESGENSKYIRVRRCSG-NGGGPSKRGMKRXXXXXXPFDSRGSKSWPE 355 K NFKFLVTDTV+ +SK IRVR SG N + KR PFDSRGS++WPE Sbjct: 174 KDNFKFLVTDTVDGPDASSKCIRVRLNSGGNNNSMGRNSKKRKERGDNPFDSRGSENWPE 233 Query: 356 HLGKFLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKR 535 LGKFLRF+LYKENKDTQEALGLI KMLG+ RSFGFAGTKDKRSVSTQRVT+FKQRA + Sbjct: 234 QLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASK 293 Query: 536 LSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGF 715 L+ LN R+ GI++GDFCYV EGL+LGQL GN FTITLRG+ DSED+IK + +SL RNGF Sbjct: 294 LAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNGF 353 Query: 716 INYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVD 895 INY+GLQRFGSGSVPTHLVGA LL+GEWK+A +ILDPREGER + +AREYYKE D+D Sbjct: 354 INYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGERNEISKAREYYKETDDID 413 Query: 896 LTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQ 1075 TL+KLPRHLVAER+ILQCLKK PGNYLQALK IPRTLRMMYVHSYQS+LWNHAAS RVQ Sbjct: 414 GTLRKLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQ 473 Query: 1076 KYGISQVVLGDLVLCK-----EVLPTVCDSSEHE-XXXXXXXXXXXXXXXXXXXXXXVQF 1237 K+G VV+GDLV CK + L V E+E Sbjct: 474 KHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEVPETDHPDGRHNL 533 Query: 1238 VKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEF 1417 VK V +ED+ G YT +DVVLPLPGSR+ YP ND+A VYH LA+KDGI LTES+H KEF Sbjct: 534 VKTVTAEDINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEF 593 Query: 1418 SISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNIL--EKAANMTQNEVHVDG-- 1585 SI+SM G YR+VFQ+P+DF WEL+ Y + N PLAETDL+ + +K AN+ + E V G Sbjct: 594 SITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAKDKLANIVKEEEAVCGNK 653 Query: 1586 -----ICSSQIRTSDTENSIGMHLDED--SNENPLSTIETINSSDILSKKQALKMAFTLP 1744 C Q + + + +E + E +E++ +D K+ ALK+ TLP Sbjct: 654 KKDPSDCMKQSESLSKDIKLSTENNEAACAKEVKQPHVESVCGADSQGKQMALKLGLTLP 713 Query: 1745 TSCYATMAIREILKSSTSVSYHKALN 1822 +SCYATMAIRE+LK+STSV++HK LN Sbjct: 714 SSCYATMAIRELLKTSTSVAFHKTLN 739 >ref|XP_003568149.1| PREDICTED: pseudouridylate synthase 7 homolog [Brachypodium distachyon] Length = 693 Score = 692 bits (1787), Expect = 0.0 Identities = 368/627 (58%), Positives = 449/627 (71%), Gaps = 21/627 (3%) Frame = +2 Query: 5 DKDYTSVIESFRLLCGEADADALKEFIAKVLSL-ERDVPPVMLAPDPDKSHRAEVHNFFK 181 D D++ +ESF L +AD DALK + +V + + PV+L+PD DK+HR+EVHNFFK Sbjct: 72 DADHSQALESFHALSTDADCDALKGLLERVSAGGDSGFSPVILSPDADKAHRSEVHNFFK 131 Query: 182 KNFKFLVTDTVEESGENSKYIRVRRCSGNGGGPSKRGM-------KRXXXXXX------P 322 KNFKFLVTDTVE S K IRVR S GGG RG KR P Sbjct: 132 KNFKFLVTDTVEHSDGVKKCIRVRVGSEAGGGRGSRGRGGGGRGKKRKNMNGSDWRDDTP 191 Query: 323 FDSRGSKSWPEHLGKFLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQ 502 FD RGS +WP H+GKFLRF+L KENKDTQ+ALG+IGKMLG+ R+FGF+GTKDKR+V+TQ Sbjct: 192 FDRRGSTNWPPHIGKFLRFHLCKENKDTQDALGVIGKMLGLQPRAFGFSGTKDKRAVTTQ 251 Query: 503 RVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 682 +VT+FK A +L+ LN R+FGIKVG+FCYV EGL LGQL GN FTITLRG+ A+SE +IK Sbjct: 252 QVTVFKVPANKLAALNKRLFGIKVGNFCYVKEGLGLGQLMGNRFTITLRGVVAESEGVIK 311 Query: 683 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREA 862 A DSL +NGFINYYGLQRFGS SVPTHLVG+ALL+GEWKTA LILDPREGER +++ Sbjct: 312 AAVDSLGKNGFINYYGLQRFGSSSVPTHLVGSALLRGEWKTAVKLILDPREGERDDIKKV 371 Query: 863 REYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSY 1042 RE+YKEHGD+D+ L+ PRHLVAE++ILQCL+K P NYLQALK IPRTLRMMYVHSYQSY Sbjct: 372 REHYKEHGDIDMALRNFPRHLVAEKAILQCLRKCPENYLQALKGIPRTLRMMYVHSYQSY 431 Query: 1043 LWNHAASMRVQKYGISQVVLGDLVLCKEVLPTVCDS-SEHEXXXXXXXXXXXXXXXXXXX 1219 LWNHAASMRVQKYGISQV+ GDL+ KE P S E Sbjct: 432 LWNHAASMRVQKYGISQVIEGDLIYSKESHPGEATSVGTSETDDDHANSSEIDICSETLP 491 Query: 1220 XXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESV 1399 +Q VK VDSEDLLKG Y+FEDVVLPLPGS+ +P N++A +YH++AKKDGI+LT S Sbjct: 492 EENIQSVKIVDSEDLLKGIYSFEDVVLPLPGSQALFPGNEVAEIYHEMAKKDGISLTGSA 551 Query: 1400 HGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKA--ANMTQNEV 1573 HG KEFSI++MKG+YR+VFQRPIDF WEL+ YT+++ LAETD++IL K NE Sbjct: 552 HGVKEFSITNMKGSYRRVFQRPIDFEWELMKYTDESASLAETDMDILSKVKLTEAKANEP 611 Query: 1574 HVDGICSSQIR----TSDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTL 1741 G+ +S+ S +ENS+ ++E L ++ SSDI K A+K+AFTL Sbjct: 612 GSSGVSNSKPADCKLESPSENSM------PTSETSLGENKSNGSSDISPSKLAVKLAFTL 665 Query: 1742 PTSCYATMAIREILKSSTSVSYHKALN 1822 P S YATMAIRE+LK+ TSV+Y K L+ Sbjct: 666 PASTYATMAIRELLKNPTSVAYQKTLD 692 >gb|EOY11113.1| Pseudouridine synthase family protein, putative isoform 1 [Theobroma cacao] Length = 763 Score = 691 bits (1782), Expect = 0.0 Identities = 369/643 (57%), Positives = 450/643 (69%), Gaps = 37/643 (5%) Frame = +2 Query: 5 DKDYTSVIESFRLLCGEADADALKEFIAKVLS-LERDVPPVMLAPDPDKSHRAEVHNFFK 181 +K Y S I FR L G+ DAD L+ FI ++ S E D+ P++L+PD DKSHR +HNFFK Sbjct: 123 NKCYASEIIKFRSLAGDTDADRLEAFINQITSGSEEDICPIVLSPDSDKSHRTAMHNFFK 182 Query: 182 KNFKFLVTDTVEESGENSKYIRVRRCSGNGGGPSKRGMKRXXXXXXPFDSRGSKSWPEHL 361 +N +FLVTDTV+ +SK IRVR SGN + KR P+DSRGS WPEHL Sbjct: 183 ENLRFLVTDTVDGPDSSSKCIRVRLNSGNNN-KGRNSKKRKERGDKPYDSRGSSHWPEHL 241 Query: 362 GKFLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLS 541 GKFLRF+LYKENKDTQEALGLIGKMLG+ RSFGFAGTKDKRSVSTQRVT+FKQ A RL+ Sbjct: 242 GKFLRFHLYKENKDTQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLA 301 Query: 542 ELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFIN 721 LN R+ GIKVGDFCYV + +LGQL GN FTI LRGI ADSE+ IK + +SL R+GFIN Sbjct: 302 ALNERLIGIKVGDFCYVKDDFLLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFIN 361 Query: 722 YYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGE-------------RPIVR-- 856 Y+GLQRFGSGS+PTH +GA LL+GEW+ AAS ILDPREG+ + + R Sbjct: 362 YFGLQRFGSGSIPTHRIGATLLRGEWQAAASTILDPREGDILSLTFFFPFLLGKALFRCL 421 Query: 857 ---EAREYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVH 1027 AREYYKE GD++ TL++LPRHLVAER++LQCLKK PGNYLQALK IPRTLRMMYVH Sbjct: 422 TTQRAREYYKETGDIEGTLRQLPRHLVAERAMLQCLKKCPGNYLQALKAIPRTLRMMYVH 481 Query: 1028 SYQSYLWNHAASMRVQKYGISQVVLGDLVLCK-------EVLPTVCDSSEHEXXXXXXXX 1186 SYQSYLWNHAASMRV+KYG ++VVLGDLV CK +V+P+ + + E Sbjct: 482 SYQSYLWNHAASMRVEKYGSNEVVLGDLVYCKGNDAEKVKVVPSEHEDNNFEDAYDCSQL 541 Query: 1187 XXXXXXXXXXXXXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLA 1366 VKA+ + D+ G+YT EDVVLP+PGSRI YP NDIANVYHD+A Sbjct: 542 DEISGTDLPEGKN--NLVKAITAADISTGNYTIEDVVLPMPGSRIIYPVNDIANVYHDMA 599 Query: 1367 KKDGITLTESVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEK 1546 KKDGI+LTESVH KEFSI+SM G+YR+VFQ+PIDF WEL+ YT+ ++ L+ETDL+ + K Sbjct: 600 KKDGISLTESVHNIKEFSITSMTGSYRRVFQKPIDFEWELLSYTDGSIALSETDLDKIAK 659 Query: 1547 A--ANMTQNEVHVDGICSS---------QIRTSDTENSIGMHLDEDSNENPLSTIETINS 1693 N+ + E DG + D + S G E S E I ++ Sbjct: 660 TKPVNLVKEEKPTDGTEGQDSSDHMEHIESFEDDKKFSTGNVEVEGSREAEPPQIHSLPE 719 Query: 1694 SDILSKKQALKMAFTLPTSCYATMAIREILKSSTSVSYHKALN 1822 S+ L ++ALK+AFTLP SCYATMAIRE+LK+STSV++HK LN Sbjct: 720 SNSLGTQKALKLAFTLPASCYATMAIRELLKTSTSVAFHKTLN 762 >emb|CBI34194.3| unnamed protein product [Vitis vinifera] Length = 693 Score = 689 bits (1777), Expect = 0.0 Identities = 368/626 (58%), Positives = 442/626 (70%), Gaps = 20/626 (3%) Frame = +2 Query: 5 DKDYTSVIESFRLLCGEADADALKEFIAKVLS-LERDVPPVMLAPDPDKSHRAEVHNFFK 181 +K Y S IE FR L G++D + LK I +V S +E V P++L+ DKSHR VHNFFK Sbjct: 68 NKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSHRTAVHNFFK 127 Query: 182 KNFKFLVTDTVEESGENSKYIRVRRCSGNGGGPSKRGMKRXXXXXXPFDSRGSKSWPEHL 361 +N KFLVTDT++ +SK IRVR SG + KR PFDSRGS +W EH+ Sbjct: 128 ENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRRDKPFDSRGSDNWSEHV 187 Query: 362 GKFLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLS 541 GKFLRF+LYKENKDTQEA+GLIGKMLG+ RSFGFAGTKDKRSVSTQRVT+FKQ A RL+ Sbjct: 188 GKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHANRLA 247 Query: 542 ELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFIN 721 LN R+ GIKVGDFC+V EGLVLGQL GN FTITLRG+ ADSE+ IK + D+L R GFIN Sbjct: 248 ALNERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEETIKASADALGRLGFIN 307 Query: 722 YYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLT 901 Y+GLQRFGSGSVPTHL+GAALL+GEW+TA SLILDPREG+ ++ +AREYYKE D++ T Sbjct: 308 YFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGD-ILLLKAREYYKESDDIEGT 366 Query: 902 LKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKY 1081 L++ PRHLVAER+ILQCLKK+PGNYLQALK IPRTLRMMYVHSYQSYLWNHAASMRVQ Y Sbjct: 367 LRQFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQNY 426 Query: 1082 GISQVVLGDLVLCK----EVLPTVCDSSEHEXXXXXXXXXXXXXXXXXXXXXXVQF--VK 1243 G QVVLGDLV CK E + V +S + + VK Sbjct: 427 GTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPEERNDPVK 486 Query: 1244 AVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSI 1423 A+D+EDLL G+YT +DVVLPLPGSR YPTNDIA VYHD AKKD I+LTES H KEFSI Sbjct: 487 ALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSI 546 Query: 1424 SSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETD---------LNILEKAANMTQNEVH 1576 ++M G +R+VFQ+PIDF WEL+ YT N+PLAETD NI+ + NE Sbjct: 547 TNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGEDSRNGNEKE 606 Query: 1577 VDGICSSQIRTSDTENSIGMHLDEDS----NENPLSTIETINSSDILSKKQALKMAFTLP 1744 C Q + E+++ + D + E L +E S ++ALK++FTLP Sbjct: 607 NSFQCMKQ--SESFEHNVNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKLSFTLP 664 Query: 1745 TSCYATMAIREILKSSTSVSYHKALN 1822 SCYATMAIRE+LK+STSV++ K LN Sbjct: 665 ASCYATMAIRELLKTSTSVAFQKTLN 690 >ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] gi|52354299|gb|AAU44470.1| hypothetical protein AT3G04820 [Arabidopsis thaliana] gi|61742699|gb|AAX55170.1| hypothetical protein At3g04820 [Arabidopsis thaliana] gi|332640619|gb|AEE74140.1| pseudouridine synthase [Arabidopsis thaliana] Length = 715 Score = 687 bits (1773), Expect = 0.0 Identities = 369/615 (60%), Positives = 439/615 (71%), Gaps = 10/615 (1%) Frame = +2 Query: 8 KDYTSVIESFRLLCGEADADALKEFIAKVLS-LERDVPPVMLAPDPDKSHRAEVHNFFKK 184 ++YTS +ESF+ + DA+ L+ I +V S + +V PV+L P DKS R +HNF K+ Sbjct: 107 QNYTSAVESFKSISSVTDAERLEILINQVTSGTDGEVLPVVLDPSSDKSKRTAIHNFVKE 166 Query: 185 NFKFLVTDTVEESGENSKYIRVRRCSGNGGGPSKRGMKRXXXXXXPFDSRGSKSWPEHLG 364 NFKFLVTDTV+ SK IRVR SG R KR PFDSRGS+ WPEH+G Sbjct: 167 NFKFLVTDTVDGPDSTSKCIRVRVNSGANNNRGNRSKKRKERGDKPFDSRGSEHWPEHVG 226 Query: 365 KFLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSE 544 KFLRF+LYKENKDTQEALGLIGKMLGV +SFGF+GTKDKRSVSTQRVT+FKQ+A +L+ Sbjct: 227 KFLRFHLYKENKDTQEALGLIGKMLGVQPKSFGFSGTKDKRSVSTQRVTVFKQQASKLAA 286 Query: 545 LNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINY 724 LN R+FGIKVGDFC V EGL+LGQL GN FTITLRG+ ADSE+ IK++ +SL ++GFINY Sbjct: 287 LNKRLFGIKVGDFCNVKEGLLLGQLMGNRFTITLRGVVADSEETIKQSAESLGKDGFINY 346 Query: 725 YGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTL 904 +GLQRFGSGSVPTH VGAALLKGEWK A +ILDPRE ER +V +AREYYKE GD+D TL Sbjct: 347 FGLQRFGSGSVPTHHVGAALLKGEWKDAVDMILDPRETERHVVNDAREYYKETGDIDGTL 406 Query: 905 KKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYG 1084 ++LPR+LVAER+ILQCLKK PGNYLQALK IPRTLRMMYVHSYQSYLWN+AAS+RV+ YG Sbjct: 407 RQLPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVKNYG 466 Query: 1085 ISQVVLGDLVLCK-EVLPTVCDS--SEHEXXXXXXXXXXXXXXXXXXXXXXVQ--FVKAV 1249 SQVVLGDLV K + + DS SEH + VK V Sbjct: 467 TSQVVLGDLVSTKVDAAKRMVDSLTSEHNESSEEALDCDQVDDTAVVDLPAERSDLVKVV 526 Query: 1250 DSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISS 1429 EDL G Y+ D+VLPLPGSR+ YP+NDIA +YHDLAKKDGI+LTES+HG KEFSI+S Sbjct: 527 SIEDLEAGTYSTSDIVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLTESIHGVKEFSITS 586 Query: 1430 MKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEVHVDGICSSQIRT 1609 M G YR+VFQ+PIDF WEL+ YT+ N PLAETDL+ + N +V + Sbjct: 587 MTGGYRRVFQKPIDFEWELLTYTDSNKPLAETDLDRI--PMNKPVEKVGSTEEIEDESMK 644 Query: 1610 SDT----ENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLPTSCYATMAIRE 1777 SDT + DSNE T + D + ALKMA TLP+SCYATMAIRE Sbjct: 645 SDTNPHDSGETNLKDQTDSNEAEKDT----GNPDSEQTQMALKMALTLPSSCYATMAIRE 700 Query: 1778 ILKSSTSVSYHKALN 1822 +LK+STSV+YHK LN Sbjct: 701 LLKTSTSVAYHKTLN 715 >gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus notabilis] Length = 784 Score = 687 bits (1772), Expect = 0.0 Identities = 360/611 (58%), Positives = 435/611 (71%), Gaps = 13/611 (2%) Frame = +2 Query: 8 KDYTSVIESFRLLCGEADADALKEFIAKVLSLE-RDVPPVMLAPDPDKSHRAEVHNFFKK 184 K YTS IESFR L G++DA++L+ I ++ S +V P++L+P DKSHR E+HNFFKK Sbjct: 128 KSYTSEIESFRCLAGDSDAESLEALINQINSGGGEEVSPIVLSPSSDKSHRTEIHNFFKK 187 Query: 185 NFKFLVTDTVEESGENSKYIRVRRCSGNGGGPSKRGMKRXXXXXXPFDSRGSKSWPEHLG 364 NFKFLVTDTV+ +SK IRVR SG + KR PFD RGS WPEH+G Sbjct: 188 NFKFLVTDTVDGPDASSKCIRVRLNSGRHNNHGRNSKKRKERGDKPFDRRGSDDWPEHVG 247 Query: 365 KFLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSE 544 KFLRF+LYKENKD+QEALGLIGKMLG+ RSFGFAGTKDKRSVSTQRVT+FKQRA RL+ Sbjct: 248 KFLRFHLYKENKDSQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAA 307 Query: 545 LNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINY 724 LN R+ GI+VGDFCYV E LVLGQL+GN FT+TLRG+ ADSE+ IK + +L R GFINY Sbjct: 308 LNDRLIGIQVGDFCYVKEELVLGQLSGNRFTVTLRGVVADSEETIKASASALGRRGFINY 367 Query: 725 YGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGE--RPIVREAREYYKEHGDVDL 898 +GLQRFGSGSVPT+L+GA L +GEWK A +ILDPREG+ ++ +AREYYKE D+D Sbjct: 368 FGLQRFGSGSVPTYLIGAMLFRGEWKDAVHMILDPREGDILLDVITKAREYYKETNDIDG 427 Query: 899 TLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQK 1078 TL++LPRHLVAE +ILQCLKK PGNYLQALK IPRTLRMMYVHSYQSYLWNHAAS RVQK Sbjct: 428 TLRQLPRHLVAENAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASTRVQK 487 Query: 1079 YGISQVVLGDLVLCKE-----VLPTV-CDSSEHEXXXXXXXXXXXXXXXXXXXXXXVQFV 1240 YG QVV+GDLV CKE V T D + + V Sbjct: 488 YGTDQVVVGDLVFCKEHNIEKVKGTASADCKDEDSNAIFGSHDIDEVSGAELPEERNNPV 547 Query: 1241 KAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFS 1420 K V +ED+L G++ +DVVLPLPGSR+ PTNDIA VYHDLAKKD I+LTES H KEFS Sbjct: 548 KVVAAEDILAGNFAIDDVVLPLPGSRVILPTNDIAQVYHDLAKKDAISLTESAHNVKEFS 607 Query: 1421 ISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANM-TQNEVHVDGICSS 1597 I+SM G+YR+VFQ+P+D+ WEL+ YTN +PLAETDL+I+ K+ E V+G S Sbjct: 608 ITSMTGSYRRVFQKPVDYEWELLTYTNGTIPLAETDLDIIAKSKPAHVAEENEVNGNEES 667 Query: 1598 QIRTSDTENSIGMHLDE---DSNENPLSTIETINSSDILSKKQALKMAFTLPTSCYATMA 1768 R+ EN + D+ D E+ ++ + ALK++FTLP SCYATMA Sbjct: 668 TKRSKRVENEAVLQTDDNKVDGEREAELQAESTCGTNSQEPQMALKLSFTLPASCYATMA 727 Query: 1769 IREILKSSTSV 1801 IRE+LK+STSV Sbjct: 728 IRELLKTSTSV 738 >ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine max] Length = 690 Score = 686 bits (1771), Expect = 0.0 Identities = 358/617 (58%), Positives = 443/617 (71%), Gaps = 14/617 (2%) Frame = +2 Query: 14 YTSVIESFRLLCGEADADALKEFIAKVLSLERD-VPPVMLAPDPDKSHRAEVHNFFKKNF 190 Y S IESF+ L G++DA L+EFI K+ + D V P++L+PD DKSHR +HNFFK+NF Sbjct: 75 YASQIESFKSLAGDSDAVLLEEFINKINAGGEDGVSPIVLSPDSDKSHRKAMHNFFKENF 134 Query: 191 KFLVTDTVEESGENSKYIRVRRCSGNGGGPSKRGMKRXXXXXXPFDSRGSKSWPEHLGKF 370 KFLVTD V+ +SK IRVR S K KR PFDSRGS++WP+++GKF Sbjct: 135 KFLVTDVVDGPDASSKCIRVRLNSAEPNNKGKNSKKRKERGDKPFDSRGSENWPKNVGKF 194 Query: 371 LRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSELN 550 LRF+LYKENKDT EALG+IG ML V +SFGFAGTKDKR+V+TQRVT++KQRA RL+ LN Sbjct: 195 LRFHLYKENKDTHEALGVIGNMLSVQPKSFGFAGTKDKRAVTTQRVTVYKQRASRLASLN 254 Query: 551 SRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYYG 730 R+FGIK+GDFCYV EGL LGQL GN FTITLRGI ADSEDIIK + D+L R+GFINY+G Sbjct: 255 KRLFGIKLGDFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIKASADALGRHGFINYFG 314 Query: 731 LQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLKK 910 LQRFGSGS+PTHL+GAALL+GEWK A +ILDPR+GE+ + +AR+YYKE DV TLK+ Sbjct: 315 LQRFGSGSLPTHLIGAALLQGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLKQ 374 Query: 911 LPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGIS 1090 LPR+LVAER++LQ LK PGNYLQALK+IPRTLRM+YVHSYQSYLWNHAAS RVQKYG Sbjct: 375 LPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHAASKRVQKYGTE 434 Query: 1091 QVVLGDLVLCKEVLP---TVCDSSEHEXXXXXXXXXXXXXXXXXXXXXXVQFVKAVDSED 1261 VVLGDLV CKE T SE+ + VK VD ED Sbjct: 435 NVVLGDLVYCKENSTGKVTESVGSEYAEDCSGRYDSNNEDEISGEIHEEIDSVKVVDVED 494 Query: 1262 LLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISSMKGA 1441 L G+YT +DV+LP+PGSRI+YPTN IANVY DLAKKDGI+LTESVH ++FSI+S+ G Sbjct: 495 LNSGYYTIDDVILPMPGSRIKYPTNHIANVYEDLAKKDGISLTESVHNVEDFSITSITGC 554 Query: 1442 YRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANM----------TQNEVHVDGIC 1591 YR+VFQ+PI+F WEL+ Y++ N L ETDL+ + K+ M +NE D C Sbjct: 555 YRRVFQKPINFEWELLTYSDSNKQLVETDLDKVNKSKPMGTVKQMGAANGKNEEAFD--C 612 Query: 1592 SSQIRTSDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLPTSCYATMAI 1771 ++ +S+ + + + E L E+++ S + ALK++FTLP SCYATMAI Sbjct: 613 IRELESSNDVVKVENYSEIAGEEIKLPHDESLSGSSSQDSQIALKLSFTLPASCYATMAI 672 Query: 1772 REILKSSTSVSYHKALN 1822 RE+LK+STSV+YHK LN Sbjct: 673 RELLKTSTSVAYHKTLN 689 >ref|XP_004494684.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1 [Cicer arietinum] Length = 698 Score = 684 bits (1765), Expect = 0.0 Identities = 359/620 (57%), Positives = 440/620 (70%), Gaps = 17/620 (2%) Frame = +2 Query: 14 YTSVIESFRLLCGEADADALKEFIAKVLSLERDVP-PVMLAPDPDKSHRAEVHNFFKKNF 190 Y S IESF+ L GE+DA +L+EFI ++ D P P++L+PD DKSHR VH FF++NF Sbjct: 81 YASQIESFKSLAGESDASSLEEFINQINVGGEDSPSPIILSPDSDKSHRTAVHVFFRENF 140 Query: 191 KFLVTDTVEESGENSKYIRVRRCSGNGGGPSKRGMKRXXXXXXPFDSRGSKSWPEHLGKF 370 KFLVTDTV+ +SK IRVR SG K KR PFDSRGS++WPE+ GKF Sbjct: 141 KFLVTDTVDGPDASSKCIRVRLNSGGPNNKGKNSRKRKDRDNKPFDSRGSENWPENAGKF 200 Query: 371 LRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSELN 550 LRF+L+KENKDTQEALG++G MLG+ RSFGFAGTKDKR+V+TQRVT++KQ+A++L+ LN Sbjct: 201 LRFHLFKENKDTQEALGVLGNMLGIKSRSFGFAGTKDKRAVTTQRVTVYKQQARKLASLN 260 Query: 551 SRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYYG 730 ++FGIKVGDFCYVNEGL LGQL GN FTITLRGI ADS D IK A DSL R+GFINY+G Sbjct: 261 EKLFGIKVGDFCYVNEGLCLGQLLGNRFTITLRGIVADSVDTIKAAADSLGRHGFINYFG 320 Query: 731 LQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLKK 910 LQRFGSGSVPTH +GAAL +GEWK A LILDPR+GER ++ +AR+YYK+ DV TLK+ Sbjct: 321 LQRFGSGSVPTHRIGAALFRGEWKLAVDLILDPRDGERYVIAKARKYYKDTNDVAGTLKQ 380 Query: 911 LPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGIS 1090 LP+ LVAER++L+ LK+FPGNYLQALK+IPRTLRMMYVHSYQSYLWNHAAS RVQKYG Sbjct: 381 LPQFLVAERAVLKSLKQFPGNYLQALKSIPRTLRMMYVHSYQSYLWNHAASTRVQKYGTE 440 Query: 1091 QVVLGDLVLCKEVLPT----VCDSSEHEXXXXXXXXXXXXXXXXXXXXXXVQFVKAVDSE 1258 QVVLGDLV CKE P+ + S + VKAV++E Sbjct: 441 QVVLGDLVYCKENPPSKATEIVGSECDDDCGDIYDSNIEDEIPEDIHDKSNSSVKAVNAE 500 Query: 1259 DLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISSMKG 1438 DL YT +DV+LP+PGSR YP NDI VY+DL KDGI+LTE+VH AKEFS++S+ G Sbjct: 501 DLNSKSYTIDDVILPMPGSRSIYPANDIVKVYNDLTNKDGISLTENVHNAKEFSMTSVTG 560 Query: 1439 AYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEVHVDGI---------- 1588 +YR+VFQ+PI+F WEL+ YT+ N PL ETD L+K + VH G Sbjct: 561 SYRRVFQKPINFEWELLTYTDSNKPLVETD---LDKIGKSKRTNVHAVGASNGQKETTAF 617 Query: 1589 -CSSQIRTSDTENSIGMHLDED-SNENPLSTIETINSSDILSKKQALKMAFTLPTSCYAT 1762 C Q+ +SD + DE+ S E L E++ S ALK+ FTLP+SCYAT Sbjct: 618 DCIRQVESSDDGVKVETDYDENASKEVILPHDESVPDSSSKDSHTALKLTFTLPSSCYAT 677 Query: 1763 MAIREILKSSTSVSYHKALN 1822 MAIRE+LK+STSV+Y K LN Sbjct: 678 MAIRELLKTSTSVAYQKTLN 697 >ref|XP_006604840.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X2 [Glycine max] Length = 676 Score = 678 bits (1750), Expect = 0.0 Identities = 354/617 (57%), Positives = 439/617 (71%), Gaps = 14/617 (2%) Frame = +2 Query: 14 YTSVIESFRLLCGEADADALKEFIAKVLSLERD-VPPVMLAPDPDKSHRAEVHNFFKKNF 190 Y S IESF+ L E DA L+EFI K+ + D V P++L+PD DKSHR +HNFFK+NF Sbjct: 61 YASQIESFKSLAEEYDAILLEEFINKINAGGEDSVSPIVLSPDSDKSHRKAMHNFFKENF 120 Query: 191 KFLVTDTVEESGENSKYIRVRRCSGNGGGPSKRGMKRXXXXXXPFDSRGSKSWPEHLGKF 370 KFLVTD V +SK IRVR S K KR PFDSRGS++WPE++GKF Sbjct: 121 KFLVTDVVNGPDASSKCIRVRLNSAEPNNKGKNSKKRKERDDKPFDSRGSENWPENVGKF 180 Query: 371 LRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSELN 550 LRF+LYKENKDT EALG+IG ML + +SFGFAGTKDKR+V+TQRVT++KQ+A RL+ LN Sbjct: 181 LRFHLYKENKDTHEALGVIGNMLSIQPKSFGFAGTKDKRAVTTQRVTVYKQQASRLASLN 240 Query: 551 SRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYYG 730 R+FGIK+GDFCYV EGL LGQL GN FTITLRGI ADSEDIIK + D+L R+GFINY+G Sbjct: 241 KRLFGIKLGDFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIKASADALGRHGFINYFG 300 Query: 731 LQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLKK 910 LQRFGSGS+PTHL+GAALL+GEWK A +ILDPR+GE+ + +AR+YYKE DV TLK+ Sbjct: 301 LQRFGSGSLPTHLIGAALLRGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLKQ 360 Query: 911 LPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGIS 1090 LPR+LVAER++LQ LK PGNYLQALK+IPRTLRM+YVHSYQSYLWNHAAS RVQKYG Sbjct: 361 LPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHAASKRVQKYGTE 420 Query: 1091 QVVLGDLVLCKEVLP---TVCDSSEHEXXXXXXXXXXXXXXXXXXXXXXVQFVKAVDSED 1261 VVLGDLV CKE T SE+ + VK +D+ED Sbjct: 421 NVVLGDLVYCKENSTGKVTEFVGSEYAEDCRGRYDSNNEDEVSGEIHEEINSVKVIDAED 480 Query: 1262 LLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISSMKGA 1441 L G YT +DV+LP+PGSR++YPTN IANVY DLAKKDGI+LTESVH ++FSI+S+ G Sbjct: 481 LNSGCYTIDDVILPMPGSRVKYPTNHIANVYEDLAKKDGISLTESVHNVEDFSITSITGC 540 Query: 1442 YRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMT----------QNEVHVDGIC 1591 YR+VFQ+PI+F WEL+ Y++ + L +TDL+ + K+ M +NE D C Sbjct: 541 YRRVFQKPINFEWELLSYSDSSEQLVDTDLDKINKSKPMNTVKQMGAANGKNEEAFD--C 598 Query: 1592 SSQIRTSDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLPTSCYATMAI 1771 ++ +SD + + + E L E++ S + ALK++FTLP SCYATMAI Sbjct: 599 IRELESSDDIAKVENYSEILGEEVKLPHDESLIGSSSQDSQIALKLSFTLPASCYATMAI 658 Query: 1772 REILKSSTSVSYHKALN 1822 RE+LK+STSV+YHK LN Sbjct: 659 RELLKTSTSVAYHKTLN 675 >ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Cucumis sativus] Length = 719 Score = 678 bits (1750), Expect = 0.0 Identities = 354/619 (57%), Positives = 445/619 (71%), Gaps = 14/619 (2%) Frame = +2 Query: 8 KDYTSVIESFRLLCGEADADALKEFIAKVLS-LERDVPPVMLAPDPDKSHRAEVHNFFKK 184 + Y S IE FR L G++DA+ L+ F+ ++ S + D+ P++ +PD DK+HR VHNFFKK Sbjct: 109 QSYASEIELFRSLAGDSDAEILEIFLKQINSGVNDDILPIVFSPDTDKTHRTAVHNFFKK 168 Query: 185 NFKFLVTDTVEESGENSKYIRVRRCSGNGGGPSKRGMKRXXXXXXPFDSRGSKSWPEHLG 364 FKFLVTDT++ +SK +RVR SG + KR PFDSRGS +WPEH+G Sbjct: 169 -FKFLVTDTIDGPDSSSKCVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVG 227 Query: 365 KFLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSE 544 KFLRF+LYKENKDTQEALGLIGKMLG+ RSFGFAGTKDKRS+STQRVT+FKQ A R++ Sbjct: 228 KFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRIAA 287 Query: 545 LNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINY 724 LN R+ GIK+G+F Y+ EGL+LGQL GN FTITLRG+ A+SED+IK + ++L R+GFINY Sbjct: 288 LNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVANSEDVIKASAEALGRHGFINY 347 Query: 725 YGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTL 904 +GLQRFGSGSVPTHLVGA+LL+GEWK A ++ILDPREG+ ++ AR+YYKE D+D TL Sbjct: 348 FGLQRFGSGSVPTHLVGASLLRGEWKGAVNMILDPREGDILLLMRARDYYKESDDIDGTL 407 Query: 905 KKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYG 1084 K+LPR+LVAER+ILQCLKK PGNYLQALK IPRTLRMMYVHSYQSYLWNHAASMRVQKYG Sbjct: 408 KQLPRYLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYG 467 Query: 1085 ISQVVLGDLVLCKE---VLPTVCDSSEHEXXXXXXXXXXXXXXXXXXXXXXV-----QFV 1240 I +VV+GDLV CKE V +S E+E + + V Sbjct: 468 IDKVVVGDLVYCKENHTETAAVQNSEEYEDEDCGDANSYDSCHLEEVCKLGLPTERHKLV 527 Query: 1241 KAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFS 1420 KAV + D+L G++T +DVVLPLPGSR+ YPTNDIA VY+DLA KD I+LT SVH KEFS Sbjct: 528 KAVTAGDVLSGNFTIDDVVLPLPGSRVLYPTNDIAEVYNDLATKDSISLTNSVHNVKEFS 587 Query: 1421 ISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDL-NILEKAANMTQNEVHVDGICSS 1597 I+SM G+YR+VFQRP D+ WEL+ Y + NLPLA++DL N+L+ + E + + Sbjct: 588 ITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHNLLKSQSVEISKEEKIADKSKN 647 Query: 1598 QIRTSDTENSI----GMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLPTSCYATM 1765 + T+ S+ + L+ EN N + ALK++FTLP S YATM Sbjct: 648 EDSLDSTDQSVCCKKNIQLEAGGKENE-------NGQGTQDPQMALKLSFTLPASSYATM 700 Query: 1766 AIREILKSSTSVSYHKALN 1822 AIRE+LK+STSV++HK LN Sbjct: 701 AIRELLKTSTSVAFHKTLN 719 >ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1 [Glycine max] Length = 687 Score = 678 bits (1750), Expect = 0.0 Identities = 354/617 (57%), Positives = 439/617 (71%), Gaps = 14/617 (2%) Frame = +2 Query: 14 YTSVIESFRLLCGEADADALKEFIAKVLSLERD-VPPVMLAPDPDKSHRAEVHNFFKKNF 190 Y S IESF+ L E DA L+EFI K+ + D V P++L+PD DKSHR +HNFFK+NF Sbjct: 72 YASQIESFKSLAEEYDAILLEEFINKINAGGEDSVSPIVLSPDSDKSHRKAMHNFFKENF 131 Query: 191 KFLVTDTVEESGENSKYIRVRRCSGNGGGPSKRGMKRXXXXXXPFDSRGSKSWPEHLGKF 370 KFLVTD V +SK IRVR S K KR PFDSRGS++WPE++GKF Sbjct: 132 KFLVTDVVNGPDASSKCIRVRLNSAEPNNKGKNSKKRKERDDKPFDSRGSENWPENVGKF 191 Query: 371 LRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSELN 550 LRF+LYKENKDT EALG+IG ML + +SFGFAGTKDKR+V+TQRVT++KQ+A RL+ LN Sbjct: 192 LRFHLYKENKDTHEALGVIGNMLSIQPKSFGFAGTKDKRAVTTQRVTVYKQQASRLASLN 251 Query: 551 SRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYYG 730 R+FGIK+GDFCYV EGL LGQL GN FTITLRGI ADSEDIIK + D+L R+GFINY+G Sbjct: 252 KRLFGIKLGDFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIKASADALGRHGFINYFG 311 Query: 731 LQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLKK 910 LQRFGSGS+PTHL+GAALL+GEWK A +ILDPR+GE+ + +AR+YYKE DV TLK+ Sbjct: 312 LQRFGSGSLPTHLIGAALLRGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLKQ 371 Query: 911 LPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGIS 1090 LPR+LVAER++LQ LK PGNYLQALK+IPRTLRM+YVHSYQSYLWNHAAS RVQKYG Sbjct: 372 LPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHAASKRVQKYGTE 431 Query: 1091 QVVLGDLVLCKEVLP---TVCDSSEHEXXXXXXXXXXXXXXXXXXXXXXVQFVKAVDSED 1261 VVLGDLV CKE T SE+ + VK +D+ED Sbjct: 432 NVVLGDLVYCKENSTGKVTEFVGSEYAEDCRGRYDSNNEDEVSGEIHEEINSVKVIDAED 491 Query: 1262 LLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISSMKGA 1441 L G YT +DV+LP+PGSR++YPTN IANVY DLAKKDGI+LTESVH ++FSI+S+ G Sbjct: 492 LNSGCYTIDDVILPMPGSRVKYPTNHIANVYEDLAKKDGISLTESVHNVEDFSITSITGC 551 Query: 1442 YRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMT----------QNEVHVDGIC 1591 YR+VFQ+PI+F WEL+ Y++ + L +TDL+ + K+ M +NE D C Sbjct: 552 YRRVFQKPINFEWELLSYSDSSEQLVDTDLDKINKSKPMNTVKQMGAANGKNEEAFD--C 609 Query: 1592 SSQIRTSDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLPTSCYATMAI 1771 ++ +SD + + + E L E++ S + ALK++FTLP SCYATMAI Sbjct: 610 IRELESSDDIAKVENYSEILGEEVKLPHDESLIGSSSQDSQIALKLSFTLPASCYATMAI 669 Query: 1772 REILKSSTSVSYHKALN 1822 RE+LK+STSV+YHK LN Sbjct: 670 RELLKTSTSVAYHKTLN 686