BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00031248
         (293 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   140   2e-31
emb|CBI37346.3| unnamed protein product [Vitis vinifera]              140   2e-31
emb|CBI29513.3| unnamed protein product [Vitis vinifera]              139   4e-31
ref|XP_006413297.1| hypothetical protein EUTSA_v10024274mg [Eutr...   139   5e-31
ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-...   139   5e-31
gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus pe...   137   2e-30
ref|XP_006283020.1| hypothetical protein CARUB_v10004012mg [Caps...   137   2e-30
ref|XP_006606108.1| PREDICTED: DNA mismatch repair protein MSH3-...   136   3e-30
ref|XP_006606107.1| PREDICTED: DNA mismatch repair protein MSH3-...   136   3e-30
ref|XP_006606106.1| PREDICTED: DNA mismatch repair protein MSH3-...   136   3e-30
ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3-...   136   3e-30
ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3-...   136   3e-30
ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis t...   135   4e-30
ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arab...   134   2e-29
ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-...   132   5e-29
gb|ESW15390.1| hypothetical protein PHAVU_007G069100g [Phaseolus...   132   5e-29
gb|ESW15389.1| hypothetical protein PHAVU_007G069100g [Phaseolus...   132   5e-29
ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-...   132   5e-29
gb|AAF63754.1|AF242852_1 DNA mismatch repair protein [Brassica n...   132   5e-29
gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis]     130   1e-28

>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  140 bits (353), Expect = 2e-31
 Identities = 68/96 (70%), Positives = 79/96 (82%)
 Frame = -3

Query: 288 PDLHRRFLSKLLAPASSPPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYRFFG 109
           P LH++F+ KLL P+SS P K       YTPLE QVVDL+ K+PDV+LM EVGYRYRFFG
Sbjct: 85  PSLHQKFVQKLLEPSSSTPTKLPLPTTKYTPLEQQVVDLKQKYPDVLLMVEVGYRYRFFG 144

Query: 108 QDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           +DAEIAARVLGI+AHVDHNF TASIP+FRL+ HVRR
Sbjct: 145 EDAEIAARVLGIYAHVDHNFLTASIPTFRLNVHVRR 180


>emb|CBI37346.3| unnamed protein product [Vitis vinifera]
          Length = 490

 Score =  140 bits (353), Expect = 2e-31
 Identities = 68/96 (70%), Positives = 79/96 (82%)
 Frame = -3

Query: 288 PDLHRRFLSKLLAPASSPPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYRFFG 109
           P LH++F+ KLL P+SS P K       YTPLE QVVDL+ K+PDV+LM EVGYRYRFFG
Sbjct: 85  PSLHQKFVQKLLQPSSSTPTKLPLPTTKYTPLEQQVVDLKQKYPDVLLMVEVGYRYRFFG 144

Query: 108 QDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           +DAEIAARVLGI+AHVDHNF TASIP+FRL+ HVRR
Sbjct: 145 EDAEIAARVLGIYAHVDHNFLTASIPTFRLNVHVRR 180


>emb|CBI29513.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score =  139 bits (350), Expect = 4e-31
 Identities = 68/96 (70%), Positives = 78/96 (81%)
 Frame = -3

Query: 288 PDLHRRFLSKLLAPASSPPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYRFFG 109
           P LH++FL KLL P+SS P K       YTPLE QVVDL+ K+PDV+LM EVGYRYRFFG
Sbjct: 87  PSLHQKFLQKLLEPSSSTPTKLPLPTTKYTPLEQQVVDLKQKYPDVLLMVEVGYRYRFFG 146

Query: 108 QDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           +DAEIAARVL I+AHVDHNF TASIP+FRL+ HVRR
Sbjct: 147 EDAEIAARVLAIYAHVDHNFLTASIPTFRLNVHVRR 182


>ref|XP_006413297.1| hypothetical protein EUTSA_v10024274mg [Eutrema salsugineum]
           gi|557114467|gb|ESQ54750.1| hypothetical protein
           EUTSA_v10024274mg [Eutrema salsugineum]
          Length = 1088

 Score =  139 bits (349), Expect = 5e-31
 Identities = 68/98 (69%), Positives = 82/98 (83%), Gaps = 2/98 (2%)
 Frame = -3

Query: 288 PDLHRRFLSKLLAPASSPPRKSLPQNPT--YTPLELQVVDLRSKHPDVVLMFEVGYRYRF 115
           P LHRRFL + L P+   P +S P++ +  YTPLE QVV+L+SK+PDV+LM EVGYRYRF
Sbjct: 76  PSLHRRFLQRFLEPS---PEESAPESSSRKYTPLEQQVVELKSKYPDVILMVEVGYRYRF 132

Query: 114 FGQDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           FG+DAEIAARVLGI+AH+DHNF TASIP+FRL FHVRR
Sbjct: 133 FGEDAEIAARVLGIYAHMDHNFMTASIPTFRLQFHVRR 170


>ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-like [Fragaria vesca
           subsp. vesca]
          Length = 1106

 Score =  139 bits (349), Expect = 5e-31
 Identities = 64/96 (66%), Positives = 81/96 (84%)
 Frame = -3

Query: 288 PDLHRRFLSKLLAPASSPPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYRFFG 109
           P LH++FL KLL P++S P+   P NP  TPLELQVVDL+ ++PDV+LM EVGY+YRFFG
Sbjct: 85  PSLHQKFLQKLLEPSTSIPQPPPPSNPKLTPLELQVVDLKKRYPDVLLMVEVGYKYRFFG 144

Query: 108 QDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           +DAEIAAR LGI+AH+DH+F TAS+P+FRL+ HVRR
Sbjct: 145 EDAEIAARNLGIYAHMDHSFLTASVPTFRLNVHVRR 180


>gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus persica]
          Length = 1096

 Score =  137 bits (345), Expect = 2e-30
 Identities = 66/98 (67%), Positives = 80/98 (81%), Gaps = 2/98 (2%)
 Frame = -3

Query: 288 PDLHRRFLSKLLAPASSPPRKSLPQNPT--YTPLELQVVDLRSKHPDVVLMFEVGYRYRF 115
           P LH++FL KLL P+S  P  S   NP   +TPLE QVVDL+ ++PDV+LM EVGY+YRF
Sbjct: 95  PSLHQKFLQKLLEPSSDVPEPSPSSNPPAKFTPLEQQVVDLKKRYPDVLLMVEVGYKYRF 154

Query: 114 FGQDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           FGQDAEIAARVLGI+AH+DHNF TAS+P+FRL+ HVRR
Sbjct: 155 FGQDAEIAARVLGIYAHMDHNFLTASVPTFRLNVHVRR 192


>ref|XP_006283020.1| hypothetical protein CARUB_v10004012mg [Capsella rubella]
           gi|482551725|gb|EOA15918.1| hypothetical protein
           CARUB_v10004012mg [Capsella rubella]
          Length = 1182

 Score =  137 bits (344), Expect = 2e-30
 Identities = 68/99 (68%), Positives = 83/99 (83%), Gaps = 3/99 (3%)
 Frame = -3

Query: 288 PDLHRRFLSKLLAPASSPPRKSLPQNPT---YTPLELQVVDLRSKHPDVVLMFEVGYRYR 118
           P+LHRRFL + L P+   P +S+P   +   YTPLE QVV+L+SK+PDVVLM EVGYRYR
Sbjct: 165 PNLHRRFLQRFLEPS---PEESVPATSSARKYTPLEQQVVELKSKYPDVVLMVEVGYRYR 221

Query: 117 FFGQDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           FFG+DAEIAARVLGI+AH+DH+F TASIP+FRL+FHVRR
Sbjct: 222 FFGEDAEIAARVLGIYAHMDHSFMTASIPTFRLNFHVRR 260


>ref|XP_006606108.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X5
           [Glycine max]
          Length = 835

 Score =  136 bits (342), Expect = 3e-30
 Identities = 68/99 (68%), Positives = 81/99 (81%), Gaps = 3/99 (3%)
 Frame = -3

Query: 288 PDLHRRFLSKLLAPASS---PPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYR 118
           P LH+RFL KLL P++    P   S P  PTYTPLE QV+DL++KHPDV+LM EVGY+YR
Sbjct: 66  PSLHQRFLQKLLEPSTPQQHPASSSKP--PTYTPLEQQVLDLKAKHPDVLLMVEVGYKYR 123

Query: 117 FFGQDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           FFGQDAE A+RVLGI+AH+DHNF TASIP+FRL+ HVRR
Sbjct: 124 FFGQDAEHASRVLGIYAHMDHNFLTASIPTFRLNVHVRR 162


>ref|XP_006606107.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X4
           [Glycine max]
          Length = 967

 Score =  136 bits (342), Expect = 3e-30
 Identities = 68/99 (68%), Positives = 81/99 (81%), Gaps = 3/99 (3%)
 Frame = -3

Query: 288 PDLHRRFLSKLLAPASS---PPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYR 118
           P LH+RFL KLL P++    P   S P  PTYTPLE QV+DL++KHPDV+LM EVGY+YR
Sbjct: 66  PSLHQRFLQKLLEPSTPQQHPASSSKP--PTYTPLEQQVLDLKAKHPDVLLMVEVGYKYR 123

Query: 117 FFGQDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           FFGQDAE A+RVLGI+AH+DHNF TASIP+FRL+ HVRR
Sbjct: 124 FFGQDAEHASRVLGIYAHMDHNFLTASIPTFRLNVHVRR 162


>ref|XP_006606106.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X3
           [Glycine max]
          Length = 968

 Score =  136 bits (342), Expect = 3e-30
 Identities = 68/99 (68%), Positives = 81/99 (81%), Gaps = 3/99 (3%)
 Frame = -3

Query: 288 PDLHRRFLSKLLAPASS---PPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYR 118
           P LH+RFL KLL P++    P   S P  PTYTPLE QV+DL++KHPDV+LM EVGY+YR
Sbjct: 66  PSLHQRFLQKLLEPSTPQQHPASSSKP--PTYTPLEQQVLDLKAKHPDVLLMVEVGYKYR 123

Query: 117 FFGQDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           FFGQDAE A+RVLGI+AH+DHNF TASIP+FRL+ HVRR
Sbjct: 124 FFGQDAEHASRVLGIYAHMDHNFLTASIPTFRLNVHVRR 162


>ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X2
           [Glycine max]
          Length = 991

 Score =  136 bits (342), Expect = 3e-30
 Identities = 68/99 (68%), Positives = 81/99 (81%), Gaps = 3/99 (3%)
 Frame = -3

Query: 288 PDLHRRFLSKLLAPASS---PPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYR 118
           P LH+RFL KLL P++    P   S P  PTYTPLE QV+DL++KHPDV+LM EVGY+YR
Sbjct: 66  PSLHQRFLQKLLEPSTPQQHPASSSKP--PTYTPLEQQVLDLKAKHPDVLLMVEVGYKYR 123

Query: 117 FFGQDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           FFGQDAE A+RVLGI+AH+DHNF TASIP+FRL+ HVRR
Sbjct: 124 FFGQDAEHASRVLGIYAHMDHNFLTASIPTFRLNVHVRR 162


>ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1
           [Glycine max]
          Length = 1070

 Score =  136 bits (342), Expect = 3e-30
 Identities = 68/99 (68%), Positives = 81/99 (81%), Gaps = 3/99 (3%)
 Frame = -3

Query: 288 PDLHRRFLSKLLAPASS---PPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYR 118
           P LH+RFL KLL P++    P   S P  PTYTPLE QV+DL++KHPDV+LM EVGY+YR
Sbjct: 66  PSLHQRFLQKLLEPSTPQQHPASSSKP--PTYTPLEQQVLDLKAKHPDVLLMVEVGYKYR 123

Query: 117 FFGQDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           FFGQDAE A+RVLGI+AH+DHNF TASIP+FRL+ HVRR
Sbjct: 124 FFGQDAEHASRVLGIYAHMDHNFLTASIPTFRLNVHVRR 162


>ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis thaliana]
           gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA
           mismatch repair protein MSH3; Short=AtMSH3; AltName:
           Full=MutS protein homolog 3 gi|3319876|emb|CAA07684.1|
           Msh3 protein [Arabidopsis thaliana]
           gi|332659675|gb|AEE85075.1| DNA mismatch repair protein
           MSH3 [Arabidopsis thaliana]
          Length = 1081

 Score =  135 bits (341), Expect = 4e-30
 Identities = 66/99 (66%), Positives = 83/99 (83%), Gaps = 3/99 (3%)
 Frame = -3

Query: 288 PDLHRRFLSKLLAPASSPPRKSLPQNPT---YTPLELQVVDLRSKHPDVVLMFEVGYRYR 118
           P+LH+RFL + L P+   P + +P+  +   YTPLE QVV+L+SK+PDVVLM EVGYRYR
Sbjct: 76  PNLHQRFLQRFLEPS---PEEYVPETSSSRKYTPLEQQVVELKSKYPDVVLMVEVGYRYR 132

Query: 117 FFGQDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           FFG+DAEIAARVLGI+AH+DHNF TAS+P+FRL+FHVRR
Sbjct: 133 FFGEDAEIAARVLGIYAHMDHNFMTASVPTFRLNFHVRR 171


>ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
           lyrata] gi|297313441|gb|EFH43864.1| hypothetical protein
           ARALYDRAFT_492273 [Arabidopsis lyrata subsp. lyrata]
          Length = 1078

 Score =  134 bits (336), Expect = 2e-29
 Identities = 65/100 (65%), Positives = 83/100 (83%), Gaps = 4/100 (4%)
 Frame = -3

Query: 288 PDLHRRFLSKLLAPASSPPRKSLPQNPT----YTPLELQVVDLRSKHPDVVLMFEVGYRY 121
           P+LH+RFL + L P+   P +S+P+  +    YTPLE QVV+L+ K+PDVVLM EVGYRY
Sbjct: 76  PNLHQRFLQRFLEPS---PEESVPETSSSSRKYTPLEQQVVELKRKYPDVVLMVEVGYRY 132

Query: 120 RFFGQDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           RFFG+DAEIAARVLGI+AH+DH+F TAS+P+FRL+FHVRR
Sbjct: 133 RFFGEDAEIAARVLGIYAHMDHSFMTASVPTFRLNFHVRR 172


>ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum
           tuberosum]
          Length = 1117

 Score =  132 bits (332), Expect = 5e-29
 Identities = 65/99 (65%), Positives = 79/99 (79%), Gaps = 3/99 (3%)
 Frame = -3

Query: 288 PDLHRRFLSKLLAPAS---SPPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYR 118
           P LH++FL KLL P+     P +     NP YTPLE QVV+L++K+PDV+LM EVGYRYR
Sbjct: 91  PTLHQKFLDKLLEPSYHLLEPSKCHEIANPKYTPLEQQVVELKTKYPDVLLMIEVGYRYR 150

Query: 117 FFGQDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           FFGQDAE AARVLGI+AH+DHNF TAS+P+FRL+ HVRR
Sbjct: 151 FFGQDAENAARVLGIYAHMDHNFLTASVPTFRLNIHVRR 189


>gb|ESW15390.1| hypothetical protein PHAVU_007G069100g [Phaseolus vulgaris]
          Length = 1075

 Score =  132 bits (332), Expect = 5e-29
 Identities = 67/96 (69%), Positives = 77/96 (80%), Gaps = 2/96 (2%)
 Frame = -3

Query: 282 LHRRFLSKLLAPASS--PPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYRFFG 109
           LH+RFL K L P+S   PP  S  +  TYTPLE QV+ LR+KHPDV+LM EVGYRYRFF 
Sbjct: 72  LHQRFLHKFLEPSSPQHPPLPSSSKRLTYTPLEQQVLHLRAKHPDVLLMVEVGYRYRFFA 131

Query: 108 QDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           QDAE AARVLGI+AH+DHNF TASIP+FRL+ HVRR
Sbjct: 132 QDAEHAARVLGIYAHMDHNFLTASIPTFRLNVHVRR 167


>gb|ESW15389.1| hypothetical protein PHAVU_007G069100g [Phaseolus vulgaris]
          Length = 851

 Score =  132 bits (332), Expect = 5e-29
 Identities = 67/96 (69%), Positives = 77/96 (80%), Gaps = 2/96 (2%)
 Frame = -3

Query: 282 LHRRFLSKLLAPASS--PPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYRFFG 109
           LH+RFL K L P+S   PP  S  +  TYTPLE QV+ LR+KHPDV+LM EVGYRYRFF 
Sbjct: 72  LHQRFLHKFLEPSSPQHPPLPSSSKRLTYTPLEQQVLHLRAKHPDVLLMVEVGYRYRFFA 131

Query: 108 QDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           QDAE AARVLGI+AH+DHNF TASIP+FRL+ HVRR
Sbjct: 132 QDAEHAARVLGIYAHMDHNFLTASIPTFRLNVHVRR 167


>ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum
           lycopersicum]
          Length = 1117

 Score =  132 bits (332), Expect = 5e-29
 Identities = 65/99 (65%), Positives = 79/99 (79%), Gaps = 3/99 (3%)
 Frame = -3

Query: 288 PDLHRRFLSKLLAPAS---SPPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYR 118
           P LH++FL KLL P+     P +     NP YTPLE QVV+L++K+PDV+LM EVGYRYR
Sbjct: 91  PTLHQKFLDKLLEPSYHLLEPSKCHEIANPKYTPLEQQVVELKTKYPDVLLMIEVGYRYR 150

Query: 117 FFGQDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           FFGQDAE AARVLGI+AH+DHNF TAS+P+FRL+ HVRR
Sbjct: 151 FFGQDAENAARVLGIYAHMDHNFLTASVPTFRLNIHVRR 189


>gb|AAF63754.1|AF242852_1 DNA mismatch repair protein [Brassica napus]
          Length = 259

 Score =  132 bits (332), Expect = 5e-29
 Identities = 65/97 (67%), Positives = 79/97 (81%), Gaps = 2/97 (2%)
 Frame = -3

Query: 288 PDLHRRFLSKLLAPASSPPRKSLPQNPT--YTPLELQVVDLRSKHPDVVLMFEVGYRYRF 115
           P+LHRRFL + L P   P  +SLP   +  YTPLE QVV+L+ KHPDV+LM EVGYRYRF
Sbjct: 38  PNLHRRFLQRFLEPP--PEEESLPVTTSIKYTPLEQQVVELKRKHPDVILMVEVGYRYRF 95

Query: 114 FGQDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVR 4
           FG+DAEIAARVLGI+AH+DH+F TAS+P+FRL+ HVR
Sbjct: 96  FGEDAEIAARVLGIYAHMDHSFMTASVPTFRLNVHVR 132


>gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis]
          Length = 1080

 Score =  130 bits (328), Expect = 1e-28
 Identities = 65/102 (63%), Positives = 75/102 (73%), Gaps = 6/102 (5%)
 Frame = -3

Query: 288 PDLHRRFLSKLLAPASSPPRKSLPQNPT------YTPLELQVVDLRSKHPDVVLMFEVGY 127
           P LH +FL KLL P  + P K  P          YTPLE QVV+L+ KHPDV+LM EVGY
Sbjct: 82  PSLHEKFLQKLLEPTHNLPEKPPPSQAQNGAAVKYTPLEQQVVELKRKHPDVLLMVEVGY 141

Query: 126 RYRFFGQDAEIAARVLGIFAHVDHNFPTASIPSFRLHFHVRR 1
           +YRFFG DAEIAARVLGI+AHVDH+F TAS+P+FRL  HVRR
Sbjct: 142 KYRFFGDDAEIAARVLGIYAHVDHSFLTASVPTFRLSVHVRR 183