BLASTX nr result
ID: Zingiber24_contig00031107
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00031107
(293 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ01001.1| hypothetical protein PRUPE_ppa004717mg [Prunus pe... 71 1e-10
ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communi... 69 7e-10
ref|XP_004290752.1| PREDICTED: DDB1- and CUL4-associated factor ... 67 3e-09
gb|EOX97564.1| Transducin/WD40 repeat-like superfamily protein i... 64 2e-08
gb|EOX97563.1| Transducin/WD40 repeat-like superfamily protein i... 64 2e-08
ref|NP_568042.1| transducin/WD40 domain-containing protein [Arab... 64 2e-08
gb|AAM61549.1| unknown [Arabidopsis thaliana] 64 2e-08
ref|XP_006283478.1| hypothetical protein CARUB_v10004525mg [Caps... 64 3e-08
ref|XP_006283477.1| hypothetical protein CARUB_v10004525mg [Caps... 64 3e-08
ref|XP_004168977.1| PREDICTED: DDB1- and CUL4-associated factor ... 64 3e-08
ref|XP_004144864.1| PREDICTED: DDB1- and CUL4-associated factor ... 64 3e-08
ref|XP_006486680.1| PREDICTED: DDB1- and CUL4-associated factor ... 63 4e-08
ref|XP_006486678.1| PREDICTED: DDB1- and CUL4-associated factor ... 63 4e-08
ref|XP_006422525.1| hypothetical protein CICLE_v10028158mg [Citr... 63 4e-08
ref|XP_006422524.1| hypothetical protein CICLE_v10028158mg [Citr... 63 4e-08
ref|XP_006422523.1| hypothetical protein CICLE_v10028158mg [Citr... 63 4e-08
ref|XP_002306202.1| hypothetical protein POPTR_0004s18520g [Popu... 63 4e-08
ref|XP_006364512.1| PREDICTED: DDB1- and CUL4-associated factor ... 63 5e-08
ref|XP_006364511.1| PREDICTED: DDB1- and CUL4-associated factor ... 63 5e-08
ref|XP_006364510.1| PREDICTED: DDB1- and CUL4-associated factor ... 63 5e-08
>gb|EMJ01001.1| hypothetical protein PRUPE_ppa004717mg [Prunus persica]
Length = 494
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/58 (60%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = +2
Query: 122 LGKRQRSS-GSGILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVNT 292
+ KR R+S G ++N++QREVG LS RNF+HR SED VLRL + RKL KH GCVNT
Sbjct: 1 MNKRPRTSIGKAVVNVWQREVGELSARNFTHRVGGSEDLVLRLELYRKLEKHRGCVNT 58
>ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communis]
gi|223539508|gb|EEF41096.1| WD-repeat protein, putative
[Ricinus communis]
Length = 482
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = +2
Query: 128 KRQRSS-GSGILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVNT 292
KR R++ +LN++QREVG LS RNF+HR ASED VLRL + +KL+KH GCVNT
Sbjct: 3 KRARTNPDKAVLNVWQREVGELSTRNFAHRLAASEDLVLRLDLYKKLDKHRGCVNT 58
>ref|XP_004290752.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Fragaria vesca
subsp. vesca]
Length = 560
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = +2
Query: 119 ILGKRQRSS-GSGILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVNT 292
++ KR R+S ++N++QR++G LS RNF+HR SED VLRL I KLNKH GCVNT
Sbjct: 1 MMNKRLRTSTDKPVVNVWQRQLGELSARNFAHRLGGSEDLVLRLDIHGKLNKHQGCVNT 59
>gb|EOX97564.1| Transducin/WD40 repeat-like superfamily protein isoform 2
[Theobroma cacao]
Length = 491
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/56 (57%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = +2
Query: 128 KRQRSS-GSGILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVNT 292
KR ++S +++++QREVG LS R+F+HR ASED VLRL I +KL KH GCVNT
Sbjct: 5 KRSKTSVDKAVVDVWQREVGELSTRSFAHRLAASEDLVLRLEIYKKLEKHRGCVNT 60
>gb|EOX97563.1| Transducin/WD40 repeat-like superfamily protein isoform 1
[Theobroma cacao]
Length = 579
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/56 (57%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = +2
Query: 128 KRQRSS-GSGILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVNT 292
KR ++S +++++QREVG LS R+F+HR ASED VLRL I +KL KH GCVNT
Sbjct: 5 KRSKTSVDKAVVDVWQREVGELSTRSFAHRLAASEDLVLRLEIYKKLEKHRGCVNT 60
>ref|NP_568042.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
gi|332661532|gb|AEE86932.1| transducin/WD40
domain-containing protein [Arabidopsis thaliana]
Length = 471
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/55 (54%), Positives = 44/55 (80%)
Frame = +2
Query: 128 KRQRSSGSGILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVNT 292
KR R+ S ++N+++RE+G+L R+FS+R ASED + RLG+D+KL+KH GCVNT
Sbjct: 7 KRPRTDHS-VVNVWERELGLLPNRSFSNRFSASEDLLRRLGLDKKLDKHKGCVNT 60
>gb|AAM61549.1| unknown [Arabidopsis thaliana]
Length = 471
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/55 (54%), Positives = 44/55 (80%)
Frame = +2
Query: 128 KRQRSSGSGILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVNT 292
KR R+ S ++N+++RE+G+L R+FS+R ASED + RLG+D+KL+KH GCVNT
Sbjct: 7 KRPRTDHS-VVNVWERELGLLPNRSFSNRFSASEDLLRRLGLDKKLDKHKGCVNT 60
>ref|XP_006283478.1| hypothetical protein CARUB_v10004525mg [Capsella rubella]
gi|482552183|gb|EOA16376.1| hypothetical protein
CARUB_v10004525mg [Capsella rubella]
Length = 547
Score = 63.5 bits (153), Expect = 3e-08
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 4/61 (6%)
Frame = +2
Query: 122 LGKRQRSSGSG----ILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVN 289
+ KR RS+ +G +++ ++REVG +S RNFS+R ASED VLRL I +KL KH GCVN
Sbjct: 4 MAKRARSNFNGLHHPVVDFWRREVGGISSRNFSNRFSASEDLVLRLEIYKKLEKHKGCVN 63
Query: 290 T 292
T
Sbjct: 64 T 64
>ref|XP_006283477.1| hypothetical protein CARUB_v10004525mg [Capsella rubella]
gi|482552182|gb|EOA16375.1| hypothetical protein
CARUB_v10004525mg [Capsella rubella]
Length = 494
Score = 63.5 bits (153), Expect = 3e-08
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 4/61 (6%)
Frame = +2
Query: 122 LGKRQRSSGSG----ILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVN 289
+ KR RS+ +G +++ ++REVG +S RNFS+R ASED VLRL I +KL KH GCVN
Sbjct: 4 MAKRARSNFNGLHHPVVDFWRREVGGISSRNFSNRFSASEDLVLRLEIYKKLEKHKGCVN 63
Query: 290 T 292
T
Sbjct: 64 T 64
>ref|XP_004168977.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Cucumis
sativus]
Length = 480
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Frame = +2
Query: 122 LGKRQR--SSGSGILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVNT 292
+ KR R S ++N+++REVG LS RNF+HR A ED VLRL + +KL +H GCVNT
Sbjct: 1 MNKRARIDDSNKAVVNVWKREVGELSTRNFAHRLGALEDLVLRLDLYKKLERHKGCVNT 59
>ref|XP_004144864.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Cucumis
sativus]
Length = 480
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Frame = +2
Query: 122 LGKRQR--SSGSGILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVNT 292
+ KR R S ++N+++REVG LS RNF+HR A ED VLRL + +KL +H GCVNT
Sbjct: 1 MNKRARIDDSNKAVVNVWKREVGELSTRNFAHRLGALEDLVLRLDLYKKLERHKGCVNT 59
>ref|XP_006486680.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform X3
[Citrus sinensis]
Length = 492
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = +2
Query: 128 KRQRSS-GSGILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVNT 292
KR R+S +++++ RE+G LS RNF+ R RASED VLRLGI KL+KH GCVNT
Sbjct: 11 KRARTSVDKALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNT 66
>ref|XP_006486678.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform X1
[Citrus sinensis] gi|568866684|ref|XP_006486679.1|
PREDICTED: DDB1- and CUL4-associated factor 8-like
isoform X2 [Citrus sinensis]
Length = 549
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = +2
Query: 128 KRQRSS-GSGILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVNT 292
KR R+S +++++ RE+G LS RNF+ R RASED VLRLGI KL+KH GCVNT
Sbjct: 11 KRARTSVDKALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNT 66
>ref|XP_006422525.1| hypothetical protein CICLE_v10028158mg [Citrus clementina]
gi|557524459|gb|ESR35765.1| hypothetical protein
CICLE_v10028158mg [Citrus clementina]
Length = 538
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = +2
Query: 128 KRQRSS-GSGILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVNT 292
KR R+S +++++ RE+G LS RNF+ R RASED VLRLGI KL+KH GCVNT
Sbjct: 11 KRARTSVDKALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNT 66
>ref|XP_006422524.1| hypothetical protein CICLE_v10028158mg [Citrus clementina]
gi|557524458|gb|ESR35764.1| hypothetical protein
CICLE_v10028158mg [Citrus clementina]
Length = 492
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = +2
Query: 128 KRQRSS-GSGILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVNT 292
KR R+S +++++ RE+G LS RNF+ R RASED VLRLGI KL+KH GCVNT
Sbjct: 11 KRARTSVDKALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNT 66
>ref|XP_006422523.1| hypothetical protein CICLE_v10028158mg [Citrus clementina]
gi|557524457|gb|ESR35763.1| hypothetical protein
CICLE_v10028158mg [Citrus clementina]
Length = 458
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = +2
Query: 128 KRQRSS-GSGILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVNT 292
KR R+S +++++ RE+G LS RNF+ R RASED VLRLGI KL+KH GCVNT
Sbjct: 11 KRARTSVDKALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNT 66
>ref|XP_002306202.1| hypothetical protein POPTR_0004s18520g [Populus trichocarpa]
gi|222849166|gb|EEE86713.1| hypothetical protein
POPTR_0004s18520g [Populus trichocarpa]
Length = 442
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 3/57 (5%)
Frame = +2
Query: 131 RQRSSGS---GILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVNT 292
++RSS ++N+++RE+G LS RNF+HR ASED V RL I +KL KH+GCVNT
Sbjct: 2 KKRSSADIDQAVVNVWKRELGQLSTRNFAHRFAASEDLVSRLEIHKKLEKHDGCVNT 58
>ref|XP_006364512.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform X3
[Solanum tuberosum]
Length = 493
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/59 (54%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +2
Query: 119 ILGKRQRSS-GSGILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVNT 292
++ K RSS ++++++R VG LS RNF+HR ASED VLRL + RKL KH GCVNT
Sbjct: 1 MMRKTTRSSIDCAVVDVWKRAVGELSTRNFAHRLGASEDLVLRLDVFRKLEKHRGCVNT 59
>ref|XP_006364511.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform X2
[Solanum tuberosum]
Length = 494
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/59 (54%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +2
Query: 119 ILGKRQRSS-GSGILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVNT 292
++ K RSS ++++++R VG LS RNF+HR ASED VLRL + RKL KH GCVNT
Sbjct: 1 MMRKTTRSSIDCAVVDVWKRAVGELSTRNFAHRLGASEDLVLRLDVFRKLEKHRGCVNT 59
>ref|XP_006364510.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform X1
[Solanum tuberosum]
Length = 551
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/59 (54%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +2
Query: 119 ILGKRQRSS-GSGILNLYQREVGVLSPRNFSHRARASEDFVLRLGIDRKLNKHNGCVNT 292
++ K RSS ++++++R VG LS RNF+HR ASED VLRL + RKL KH GCVNT
Sbjct: 1 MMRKTTRSSIDCAVVDVWKRAVGELSTRNFAHRLGASEDLVLRLDVFRKLEKHRGCVNT 59