BLASTX nr result
ID: Zingiber24_contig00031104
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber24_contig00031104 (330 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 119 4e-25 gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Tri... 111 9e-23 ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 111 1e-22 gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 110 2e-22 ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 109 4e-22 ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 108 1e-21 ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 108 1e-21 ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 107 1e-21 ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 107 1e-21 gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 107 2e-21 ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 107 2e-21 gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 105 5e-21 ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 105 6e-21 ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s... 105 6e-21 ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III s... 99 5e-19 ref|XP_004306240.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 95 8e-18 ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 94 1e-17 gb|ACJ63307.1| RNA polymerase III large subunit [Asparagus offic... 94 2e-17 ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 94 2e-17 ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Sela... 93 4e-17 >ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda] gi|548832896|gb|ERM95665.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda] Length = 1383 Score = 119 bits (298), Expect = 4e-25 Identities = 61/109 (55%), Positives = 73/109 (66%) Frame = +2 Query: 2 SPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVANISGISSR 181 +PE GCS AF + LSNF+ KR A TR L LDE V+ ++ + LE++ ANISGIS + Sbjct: 951 TPERGCSMAFKEELSNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSGLEHVAANISGISRQ 1010 Query: 182 QLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 QL VFLETCISRYH K++E EPGTQMTLKTFHFAGV Sbjct: 1011 QLRVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGV 1059 >gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Triticum urartu] Length = 1248 Score = 111 bits (278), Expect = 9e-23 Identities = 58/106 (54%), Positives = 70/106 (66%) Frame = +2 Query: 11 GGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVANISGISSRQLE 190 GGCS F +LL+ FV R NTR++L LDE V K S+ E + ANISGIS++QL+ Sbjct: 809 GGCSDRFKELLTKFVGNRIKMLRNTRRALHLDEDHVGRKDSSIEECVAANISGISAKQLQ 868 Query: 191 VFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 VFL+TC+SRYHSK +E EPGTQMTLKTFHFAGV Sbjct: 869 VFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGV 914 >ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza brachyantha] Length = 1389 Score = 111 bits (277), Expect = 1e-22 Identities = 59/109 (54%), Positives = 74/109 (67%) Frame = +2 Query: 2 SPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVANISGISSR 181 S + GCS F +LL +F+ R +TR++L LDE V GK S+ E+I ANISGIS++ Sbjct: 962 SSDDGCSEKFKQLLKDFLEDRIKLLKSTRRALCLDENHV-GKDSSIEESIAANISGISAK 1020 Query: 182 QLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 QL+VFL+TC+SRYHSKK+E EPGTQMTLKTFHFAGV Sbjct: 1021 QLQVFLDTCLSRYHSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGV 1069 >gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii] Length = 1117 Score = 110 bits (275), Expect = 2e-22 Identities = 57/106 (53%), Positives = 70/106 (66%) Frame = +2 Query: 11 GGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVANISGISSRQLE 190 GGCS F +LL+ FV R NTR++L LDE V K S+ E + ANISGI+++QL+ Sbjct: 678 GGCSDRFKELLTKFVGNRIKMLRNTRRALHLDEDHVGRKDSSIEECVAANISGIAAKQLQ 737 Query: 191 VFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 VFL+TC+SRYHSK +E EPGTQMTLKTFHFAGV Sbjct: 738 VFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGV 783 >ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Brachypodium distachyon] Length = 1392 Score = 109 bits (272), Expect = 4e-22 Identities = 57/106 (53%), Positives = 69/106 (65%) Frame = +2 Query: 11 GGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVANISGISSRQLE 190 GGCS F +LL+ F R +TR++L LDE V K S+ E I ANISGIS++QL+ Sbjct: 960 GGCSDKFKELLTKFFEDRIKMLRSTRRTLHLDEDHVGMKDSSIEERIAANISGISAKQLQ 1019 Query: 191 VFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 VFL+TC+SRYHSK +E EPGTQMTLKTFHFAGV Sbjct: 1020 VFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGV 1065 >ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X2 [Solanum tuberosum] Length = 1243 Score = 108 bits (269), Expect = 1e-21 Identities = 60/110 (54%), Positives = 68/110 (61%), Gaps = 1/110 (0%) Frame = +2 Query: 2 SPEGGCSTAFNKLLSNFVHKRAA-AFANTRKSLQLDEAVVEGKRSTALENIVANISGISS 178 +PEGGCS AF LS+F+ K A N R+SL L E EG LE I NISGI+ Sbjct: 952 TPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITK 1011 Query: 179 RQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 RQL+VFL TCISRYH K++E EPGTQMTLKTFHFAGV Sbjct: 1012 RQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGV 1061 >ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X1 [Solanum tuberosum] Length = 1394 Score = 108 bits (269), Expect = 1e-21 Identities = 60/110 (54%), Positives = 68/110 (61%), Gaps = 1/110 (0%) Frame = +2 Query: 2 SPEGGCSTAFNKLLSNFVHKRAA-AFANTRKSLQLDEAVVEGKRSTALENIVANISGISS 178 +PEGGCS AF LS+F+ K A N R+SL L E EG LE I NISGI+ Sbjct: 952 TPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITK 1011 Query: 179 RQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 RQL+VFL TCISRYH K++E EPGTQMTLKTFHFAGV Sbjct: 1012 RQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGV 1061 >ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum lycopersicum] Length = 1390 Score = 107 bits (268), Expect = 1e-21 Identities = 60/110 (54%), Positives = 69/110 (62%), Gaps = 1/110 (0%) Frame = +2 Query: 2 SPEGGCSTAFNKLLSNFVHKRAA-AFANTRKSLQLDEAVVEGKRSTALENIVANISGISS 178 +PEGGCS AF LS+F+ K A N R+SL L E EG LE IV NISGI+ Sbjct: 952 TPEGGCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRGYLEKIVLNISGITK 1011 Query: 179 RQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 +QL+VFL TCISRYH K++E EPGTQMTLKTFHFAGV Sbjct: 1012 KQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGV 1061 >ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor] gi|241937900|gb|EES11045.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor] Length = 1391 Score = 107 bits (268), Expect = 1e-21 Identities = 57/109 (52%), Positives = 70/109 (64%) Frame = +2 Query: 2 SPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVANISGISSR 181 S +GGCS F K L+ F+ KR TR++L L E VE K S E++ A ISGIS++ Sbjct: 958 SSDGGCSEEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCVEESVAAIISGISAK 1017 Query: 182 QLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 QL+VFL+TC+SRY SKK+E EPGTQMTLKTFHFAGV Sbjct: 1018 QLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGV 1066 >gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group] Length = 1321 Score = 107 bits (267), Expect = 2e-21 Identities = 56/109 (51%), Positives = 71/109 (65%) Frame = +2 Query: 2 SPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVANISGISSR 181 S + GCS F +LL+ F+ R +TR++L LDE V + S+ E+I ANISGIS + Sbjct: 889 SSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAANISGISVK 948 Query: 182 QLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 QL+VFL+TC+SRYH KK+E EPGTQMTLKTFHFAGV Sbjct: 949 QLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGV 997 >ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa Japonica Group] gi|38347455|emb|CAD41360.2| OSJNBa0076N16.24 [Oryza sativa Japonica Group] gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa Japonica Group] gi|116310339|emb|CAH67354.1| OSIGBa0130B08.14 [Oryza sativa Indica Group] gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa Indica Group] gi|215768005|dbj|BAH00234.1| unnamed protein product [Oryza sativa Japonica Group] gi|218195112|gb|EEC77539.1| hypothetical protein OsI_16437 [Oryza sativa Indica Group] Length = 1383 Score = 107 bits (267), Expect = 2e-21 Identities = 56/109 (51%), Positives = 71/109 (65%) Frame = +2 Query: 2 SPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVANISGISSR 181 S + GCS F +LL+ F+ R +TR++L LDE V + S+ E+I ANISGIS + Sbjct: 951 SSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAANISGISVK 1010 Query: 182 QLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 QL+VFL+TC+SRYH KK+E EPGTQMTLKTFHFAGV Sbjct: 1011 QLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGV 1059 >gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis] Length = 1179 Score = 105 bits (263), Expect = 5e-21 Identities = 54/109 (49%), Positives = 66/109 (60%) Frame = +2 Query: 2 SPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVANISGISSR 181 +PEGGCS AF L +F+ AF T + E + + S +NIV +SG ++R Sbjct: 743 TPEGGCSAAFKNSLKSFLDNYVKAFKRTWDPCESTEGHAKMENSATTKNIVLQLSGATAR 802 Query: 182 QLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 QLEVFL+TCISRYHSKK+E EPGTQMTLKTFHFAGV Sbjct: 803 QLEVFLDTCISRYHSKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGV 851 >ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria italica] Length = 1397 Score = 105 bits (262), Expect = 6e-21 Identities = 57/110 (51%), Positives = 71/110 (64%), Gaps = 1/110 (0%) Frame = +2 Query: 2 SPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVA-NISGISS 178 S +GGCS F + L F+ +R TRK+L LDE V GK + +E I+A NISGIS+ Sbjct: 964 SSDGGCSEEFKECLKKFLEERIQLLKCTRKALHLDEKHV-GKNDSCIEEIIAANISGISA 1022 Query: 179 RQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 +QL+VFL+TC SRY+SK +E EPGTQMTLKTFHFAGV Sbjct: 1023 KQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGV 1072 >ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Fragaria vesca subsp. vesca] Length = 1390 Score = 105 bits (262), Expect = 6e-21 Identities = 52/109 (47%), Positives = 70/109 (64%) Frame = +2 Query: 2 SPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVANISGISSR 181 +P+GGCS F + F+ + A T+++ L+++ +S L+NIV NISG++ R Sbjct: 959 TPDGGCSMGFKSSIEQFLDEYVKALRKTQEAFLLNQSPGWEVKSATLQNIVQNISGVTPR 1018 Query: 182 QLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 QL+VFL+TCISRYHSKKV+ EPGTQMTLKTFHFAGV Sbjct: 1019 QLKVFLDTCISRYHSKKVDAGTAIGVIGAQSIGEPGTQMTLKTFHFAGV 1067 >ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Brachypodium distachyon] Length = 1400 Score = 99.4 bits (246), Expect = 5e-19 Identities = 51/106 (48%), Positives = 67/106 (63%) Frame = +2 Query: 11 GGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVANISGISSRQLE 190 G CS ++L+ F+ R +TR++L +DE V + S+ E I A+ISGIS++QL+ Sbjct: 963 GRCSDKLKEMLTKFLEDRVKMLRSTRRALHIDEDHVGRRDSSVEECIAADISGISAKQLQ 1022 Query: 191 VFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 VFL+TC SRYHSK +E EPGTQMTLKTFHFAGV Sbjct: 1023 VFLDTCFSRYHSKIIEAGASVGPIGAHSIGEPGTQMTLKTFHFAGV 1068 >ref|XP_004306240.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1-like [Fragaria vesca subsp. vesca] Length = 1379 Score = 95.1 bits (235), Expect = 8e-18 Identities = 49/108 (45%), Positives = 66/108 (61%) Frame = +2 Query: 5 PEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVANISGISSRQ 184 PE G S F + F+ + + T ++L L+++ +S LE IV +ISG++SRQ Sbjct: 936 PEDGLSMGFKSSIEKFLDEYVKTPSKTHENLMLNQSTGWEVKSETLEKIVKSISGVTSRQ 995 Query: 185 LEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 LEVFL+TCISRYHSK+++ EP TQMTLKTFHFAGV Sbjct: 996 LEVFLDTCISRYHSKRIDAGTAIGAIGAQSIGEPVTQMTLKTFHFAGV 1043 >ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii] gi|300146624|gb|EFJ13293.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii] Length = 1393 Score = 94.4 bits (233), Expect = 1e-17 Identities = 51/104 (49%), Positives = 63/104 (60%) Frame = +2 Query: 17 CSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVANISGISSRQLEVF 196 CSTAF L F+ K ++TRK L L ++ + EN+ AN+SG++SRQLEVF Sbjct: 970 CSTAFLDSLRKFLRKEFDTISSTRKRLSLP---LDDFGNVDDENVAANVSGLTSRQLEVF 1026 Query: 197 LETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 L TCI RYH KK++ EPGTQMTLKTFHFAGV Sbjct: 1027 LNTCIGRYHRKKLDPGTAVGAIGAQSIGEPGTQMTLKTFHFAGV 1070 >gb|ACJ63307.1| RNA polymerase III large subunit [Asparagus officinalis] Length = 544 Score = 94.0 bits (232), Expect = 2e-17 Identities = 50/96 (52%), Positives = 61/96 (63%) Frame = +2 Query: 2 SPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVANISGISSR 181 +PEGGCS+AF LL +F+HK A TR LQL E E S+ LEN+ ANISGIS++ Sbjct: 451 TPEGGCSSAFKNLLLDFLHKHVAELRKTRIRLQLQEDHKE--TSSVLENVAANISGISAQ 508 Query: 182 QLEVFLETCISRYHSKKVEXXXXXXXXXXXXXXEPG 289 QL+VF+ETCISRYH KK+E EPG Sbjct: 509 QLKVFMETCISRYHKKKLEAGAAIGAIGAQSIGEPG 544 >ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis vinifera] Length = 1383 Score = 94.0 bits (232), Expect = 2e-17 Identities = 51/105 (48%), Positives = 62/105 (59%) Frame = +2 Query: 14 GCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVANISGISSRQLEV 193 GCS AF LS F+ + F NTR++L L V + E NISGI+S+QL+V Sbjct: 959 GCSDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITSKQLQV 1018 Query: 194 FLETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 FL+TCISRY K++E EPGTQMTLKTFHFAGV Sbjct: 1019 FLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGV 1063 >ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii] gi|300158014|gb|EFJ24638.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii] Length = 1348 Score = 92.8 bits (229), Expect = 4e-17 Identities = 51/104 (49%), Positives = 62/104 (59%) Frame = +2 Query: 17 CSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVANISGISSRQLEVF 196 CS AF L F+ K ++TRK L L +E + EN+ AN+SG++SRQLEVF Sbjct: 974 CSMAFLDSLRKFLRKEFDTISSTRKRLSLP---LEDFGNLDDENVAANVSGLTSRQLEVF 1030 Query: 197 LETCISRYHSKKVEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 328 L TCI RYH KK++ EPGTQMTLKTFHFAGV Sbjct: 1031 LNTCIGRYHRKKLDPGTAVGAIGAQSIGEPGTQMTLKTFHFAGV 1074