BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00031054
         (233 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC31692.1| putative DNA-directed RNA polymerase I subunit RP...   107   2e-21
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...   106   4e-21
ref|XP_004982736.1| PREDICTED: LOW QUALITY PROTEIN: probable DNA...   104   1e-20
gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma ca...   103   2e-20
gb|EOY19646.1| DNA-directed RNA polymerase isoform 1 [Theobroma ...   103   2e-20
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...   103   2e-20
emb|CBI35100.3| unnamed protein product [Vitis vinifera]              103   2e-20
gb|ESW05690.1| hypothetical protein PHAVU_011G201300g [Phaseolus...   101   9e-20
gb|EMJ26191.1| hypothetical protein PRUPE_ppa020507mg [Prunus pe...   101   9e-20
tpg|DAA49470.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea m...   101   9e-20
tpg|DAA49469.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea m...   101   9e-20
ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I sub...   101   1e-19
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...   101   1e-19
gb|EEE51207.1| hypothetical protein OsJ_32024 [Oryza sativa Japo...   101   1e-19
gb|EEC67242.1| hypothetical protein OsI_34174 [Oryza sativa Indi...   101   1e-19
gb|ABB47823.2| DNA-directed RNA polymerase, beta subunit family ...   101   1e-19
gb|AAM92814.1| putative DNA-directed RNA polymerase I subunit, 5...   101   1e-19
ref|XP_002297732.2| DNA-directed RNA polymerase family protein [...   100   2e-19
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   100   2e-19
ref|XP_006661904.1| PREDICTED: probable DNA-directed RNA polymer...   100   2e-19

>gb|EXC31692.1| putative DNA-directed RNA polymerase I subunit RPA2 [Morus
           notabilis]
          Length = 1243

 Score =  107 bits (266), Expect = 2e-21
 Identities = 54/77 (70%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
 Frame = +1

Query: 4   FPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDLK-KKHESDRVQEI 180
           +P+GTNAIVAVL+YTGYDMEDAMILNK SV+RG   G IYQTE+IDL  + + SDRVQ +
Sbjct: 752 YPSGTNAIVAVLAYTGYDMEDAMILNKSSVDRGMFHGQIYQTETIDLSDQSNRSDRVQSV 811

Query: 181 FARSNTDRNMMSSIDSD 231
           F RSN DR+M S IDSD
Sbjct: 812 FRRSNVDRSMHSLIDSD 828


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
           gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase
           I subunit, putative [Ricinus communis]
          Length = 1159

 Score =  106 bits (264), Expect = 4e-21
 Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDLKKK-HESDRVQE 177
           E+PTGTNAIVAVL+YTGYDMEDAMILNK SVERG   G IYQTE+IDL ++   SDR Q 
Sbjct: 734 EYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGQIYQTETIDLSEEGSRSDRAQR 793

Query: 178 IFARSNTDRNMMSSIDSD 231
           +F RSN D+++ S IDSD
Sbjct: 794 MFRRSNIDKSLHSVIDSD 811


>ref|XP_004982736.1| PREDICTED: LOW QUALITY PROTEIN: probable DNA-directed RNA
           polymerase I subunit RPA2-like [Setaria italica]
          Length = 1172

 Score =  104 bits (259), Expect = 1e-20
 Identities = 53/77 (68%), Positives = 63/77 (81%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDLKKKHESDRVQEI 180
           EFP+GTNAIVAVL+YTGYDMEDAMILNK +V+RG  RGHIYQTE IDL KK+  + V EI
Sbjct: 735 EFPSGTNAIVAVLAYTGYDMEDAMILNKSAVDRGMFRGHIYQTECIDLSKKNR-ENVPEI 793

Query: 181 FARSNTDRNMMSSIDSD 231
           FA+S   R+  ++IDSD
Sbjct: 794 FAKSVLSRDTSTAIDSD 810


>gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
          Length = 1180

 Score =  103 bits (257), Expect = 2e-20
 Identities = 53/78 (67%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDL-KKKHESDRVQE 177
           E+P+GTNAIVAVL+YTGYDMEDAMILNK SVERG   G IYQTE+IDL   K +SDR Q 
Sbjct: 756 EYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGQIYQTETIDLGDDKSKSDRGQR 815

Query: 178 IFARSNTDRNMMSSIDSD 231
           IF R ++DR++ S +DSD
Sbjct: 816 IFKREHSDRSISSCLDSD 833


>gb|EOY19646.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 1074

 Score =  103 bits (257), Expect = 2e-20
 Identities = 53/78 (67%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDL-KKKHESDRVQE 177
           E+P+GTNAIVAVL+YTGYDMEDAMILNK SVERG   G IYQTE+IDL   K +SDR Q 
Sbjct: 629 EYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGQIYQTETIDLGDDKSKSDRGQR 688

Query: 178 IFARSNTDRNMMSSIDSD 231
           IF R ++DR++ S +DSD
Sbjct: 689 IFKREHSDRSISSCLDSD 706


>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
           vinifera]
          Length = 1142

 Score =  103 bits (257), Expect = 2e-20
 Identities = 53/78 (67%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDLK-KKHESDRVQE 177
           EFPTGTNAIVAVL+Y+GYDMEDAMILNK SV+RG   G IYQTE+IDL  + ++SDR Q 
Sbjct: 718 EFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQR 777

Query: 178 IFARSNTDRNMMSSIDSD 231
           +F RSN D++  S IDSD
Sbjct: 778 MFRRSNVDKSANSLIDSD 795


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  103 bits (257), Expect = 2e-20
 Identities = 53/78 (67%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDLK-KKHESDRVQE 177
           EFPTGTNAIVAVL+Y+GYDMEDAMILNK SV+RG   G IYQTE+IDL  + ++SDR Q 
Sbjct: 711 EFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQR 770

Query: 178 IFARSNTDRNMMSSIDSD 231
           +F RSN D++  S IDSD
Sbjct: 771 MFRRSNVDKSANSLIDSD 788


>gb|ESW05690.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score =  101 bits (252), Expect = 9e-20
 Identities = 53/78 (67%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDL-KKKHESDRVQE 177
           EFPTGTNAIVAVL+YTGYDMEDAMILNK SVERG   G IYQTE+IDL +++ +SDR   
Sbjct: 749 EFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQRGKSDRSSR 808

Query: 178 IFARSNTDRNMMSSIDSD 231
           IF +SN ++    SIDSD
Sbjct: 809 IFRKSNVEKLGCPSIDSD 826


>gb|EMJ26191.1| hypothetical protein PRUPE_ppa020507mg [Prunus persica]
          Length = 1037

 Score =  101 bits (252), Expect = 9e-20
 Identities = 55/78 (70%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDLK-KKHESDRVQE 177
           E+PTGTNAIVAVLSYTGYDMEDAMILNK SV+RG   G IYQTE+IDL  +K  SDR ++
Sbjct: 620 EYPTGTNAIVAVLSYTGYDMEDAMILNKSSVDRGMFHGLIYQTETIDLSDQKSRSDRSRK 679

Query: 178 IFARSNTDRNMMSSIDSD 231
            F RSN ++N  SSIDSD
Sbjct: 680 FFRRSNINKN--SSIDSD 695


>tpg|DAA49470.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea mays]
          Length = 1162

 Score =  101 bits (252), Expect = 9e-20
 Identities = 54/77 (70%), Positives = 59/77 (76%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDLKKKHESDRVQEI 180
           EFP+GTNAIVAVLSYTGYDMEDAMILNK +VERG  RGHIYQTE IDL  K   D V E 
Sbjct: 736 EFPSGTNAIVAVLSYTGYDMEDAMILNKSAVERGMFRGHIYQTECIDLSTK-SRDNVPET 794

Query: 181 FARSNTDRNMMSSIDSD 231
           FA+S   R+  + IDSD
Sbjct: 795 FAKSILTRDTSNVIDSD 811


>tpg|DAA49469.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea mays]
          Length = 1128

 Score =  101 bits (252), Expect = 9e-20
 Identities = 54/77 (70%), Positives = 59/77 (76%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDLKKKHESDRVQEI 180
           EFP+GTNAIVAVLSYTGYDMEDAMILNK +VERG  RGHIYQTE IDL  K   D V E 
Sbjct: 702 EFPSGTNAIVAVLSYTGYDMEDAMILNKSAVERGMFRGHIYQTECIDLSTK-SRDNVPET 760

Query: 181 FARSNTDRNMMSSIDSD 231
           FA+S   R+  + IDSD
Sbjct: 761 FAKSILTRDTSNVIDSD 777


>ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
           sativus]
          Length = 719

 Score =  101 bits (251), Expect = 1e-19
 Identities = 52/78 (66%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDLKKK-HESDRVQE 177
           E+PTGTNAIVAVL+YTGYDMEDAMILNK SVERG   G IYQTE+IDL  + + S R Q+
Sbjct: 295 EYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQK 354

Query: 178 IFARSNTDRNMMSSIDSD 231
           +F RSN D ++ S ID+D
Sbjct: 355 MFRRSNIDTSVRSIIDAD 372


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
           sativus]
          Length = 1173

 Score =  101 bits (251), Expect = 1e-19
 Identities = 52/78 (66%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDLKKK-HESDRVQE 177
           E+PTGTNAIVAVL+YTGYDMEDAMILNK SVERG   G IYQTE+IDL  + + S R Q+
Sbjct: 749 EYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLSDQGNRSSRSQK 808

Query: 178 IFARSNTDRNMMSSIDSD 231
           +F RSN D ++ S ID+D
Sbjct: 809 MFRRSNIDTSVRSIIDAD 826


>gb|EEE51207.1| hypothetical protein OsJ_32024 [Oryza sativa Japonica Group]
          Length = 1150

 Score =  101 bits (251), Expect = 1e-19
 Identities = 51/77 (66%), Positives = 60/77 (77%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDLKKKHESDRVQEI 180
           EFP+GTNAIVAVLSYTGYDMEDAMILNK +V+RG  RGHI+QTE IDL  K   D V E 
Sbjct: 724 EFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIFQTECIDLSAK-SRDNVTEF 782

Query: 181 FARSNTDRNMMSSIDSD 231
           F +SN  R+  ++I+SD
Sbjct: 783 FCKSNLSRDTTAAIESD 799


>gb|EEC67242.1| hypothetical protein OsI_34174 [Oryza sativa Indica Group]
          Length = 1086

 Score =  101 bits (251), Expect = 1e-19
 Identities = 51/77 (66%), Positives = 60/77 (77%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDLKKKHESDRVQEI 180
           EFP+GTNAIVAVLSYTGYDMEDAMILNK +V+RG  RGHI+QTE IDL  K   D V E 
Sbjct: 660 EFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIFQTECIDLSAK-SRDNVTEF 718

Query: 181 FARSNTDRNMMSSIDSD 231
           F +SN  R+  ++I+SD
Sbjct: 719 FCKSNLSRDTTAAIESD 735


>gb|ABB47823.2| DNA-directed RNA polymerase, beta subunit family protein, expressed
           [Oryza sativa Japonica Group]
          Length = 1044

 Score =  101 bits (251), Expect = 1e-19
 Identities = 51/77 (66%), Positives = 60/77 (77%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDLKKKHESDRVQEI 180
           EFP+GTNAIVAVLSYTGYDMEDAMILNK +V+RG  RGHI+QTE IDL  K   D V E 
Sbjct: 618 EFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIFQTECIDLSAK-SRDNVTEF 676

Query: 181 FARSNTDRNMMSSIDSD 231
           F +SN  R+  ++I+SD
Sbjct: 677 FCKSNLSRDTTAAIESD 693


>gb|AAM92814.1| putative DNA-directed RNA polymerase I subunit, 5'-partial [Oryza
           sativa Japonica Group]
          Length = 855

 Score =  101 bits (251), Expect = 1e-19
 Identities = 51/77 (66%), Positives = 60/77 (77%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDLKKKHESDRVQEI 180
           EFP+GTNAIVAVLSYTGYDMEDAMILNK +V+RG  RGHI+QTE IDL  K   D V E 
Sbjct: 429 EFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIFQTECIDLSAK-SRDNVTEF 487

Query: 181 FARSNTDRNMMSSIDSD 231
           F +SN  R+  ++I+SD
Sbjct: 488 FCKSNLSRDTTAAIESD 504


>ref|XP_002297732.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
           gi|550346693|gb|EEE82537.2| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 1117

 Score =  100 bits (250), Expect = 2e-19
 Identities = 54/78 (69%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDLKKK-HESDRVQE 177
           E PTGTNAIVAVL+YTGYDMEDAMILNK SV+RG   G IYQTE+IDL  +   SDR   
Sbjct: 695 EHPTGTNAIVAVLAYTGYDMEDAMILNKSSVDRGMFHGQIYQTETIDLSDEGSRSDRSHR 754

Query: 178 IFARSNTDRNMMSSIDSD 231
            F RSNTDR+  S IDSD
Sbjct: 755 RFRRSNTDRSSHSLIDSD 772


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform
           X1 [Glycine max]
          Length = 1175

 Score =  100 bits (250), Expect = 2e-19
 Identities = 52/78 (66%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDLKKK-HESDRVQE 177
           EFPTGTNAIVAVL+YTGYDMEDAMILNK SVERG   G IYQTE+IDL ++   SDR   
Sbjct: 749 EFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGGRSDRSSR 808

Query: 178 IFARSNTDRNMMSSIDSD 231
           +F +SN +++   SIDSD
Sbjct: 809 MFRKSNIEKSACPSIDSD 826


>ref|XP_006661904.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           [Oryza brachyantha]
          Length = 1057

 Score =  100 bits (249), Expect = 2e-19
 Identities = 52/77 (67%), Positives = 59/77 (76%)
 Frame = +1

Query: 1   EFPTGTNAIVAVLSYTGYDMEDAMILNKMSVERGFGRGHIYQTESIDLKKKHESDRVQEI 180
           EFP+GTNAIVAVLSYTGYDMEDAMILNK +V+RG  RGHIYQTE IDL +K   D   E 
Sbjct: 627 EFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIYQTECIDLSEK-SRDNAVEF 685

Query: 181 FARSNTDRNMMSSIDSD 231
           F +SN  R+  + IDSD
Sbjct: 686 FCKSNLLRDTTAVIDSD 702