BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00031053
         (1560 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006661904.1| PREDICTED: probable DNA-directed RNA polymer...   765   0.0  
tpg|DAA49470.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea m...   755   0.0  
tpg|DAA49469.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea m...   755   0.0  
ref|XP_004982736.1| PREDICTED: LOW QUALITY PROTEIN: probable DNA...   746   0.0  
gb|EMS50874.1| putative DNA-directed RNA polymerase I subunit RP...   745   0.0  
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...   742   0.0  
emb|CBI35100.3| unnamed protein product [Vitis vinifera]              742   0.0  
gb|EEE51207.1| hypothetical protein OsJ_32024 [Oryza sativa Japo...   742   0.0  
gb|EEC67242.1| hypothetical protein OsI_34174 [Oryza sativa Indi...   742   0.0  
gb|ABB47823.2| DNA-directed RNA polymerase, beta subunit family ...   742   0.0  
dbj|BAK06737.1| predicted protein [Hordeum vulgare subsp. vulgare]    741   0.0  
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...   738   0.0  
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer...   736   0.0  
ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I sub...   736   0.0  
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...   733   0.0  
gb|EMT17614.1| DNA-directed RNA polymerase I subunit RPA2 [Aegil...   731   0.0  
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   723   0.0  
ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymer...   715   0.0  
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer...   715   0.0  
ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citr...   715   0.0  

>ref|XP_006661904.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            [Oryza brachyantha]
          Length = 1057

 Score =  765 bits (1976), Expect = 0.0
 Identities = 372/517 (71%), Positives = 428/517 (82%)
 Frame = +2

Query: 8    QVKKIVGKNSTNFGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFRSVH 187
            +V++ + K S   GR IESMIKVG++N+QSGLDLPQRDGMTI AERLNF RY+SHFRSVH
Sbjct: 288  EVRRFLSKTSQYVGRAIESMIKVGKVNSQSGLDLPQRDGMTIHAERLNFHRYISHFRSVH 347

Query: 188  RGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKIKDP 367
            RG++F KMRTTSVRKLLPESWGFLCPV+TPDGEPCGLLNHMT +CR+SS Y+S G IKD 
Sbjct: 348  RGSSFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSFYNSGGAIKDF 407

Query: 368  LKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIRSLK 547
             KI+MS+++ LV  GM  LLP++ER GPPE+LHV LDGC+VGSIA+ +IEE V ++RSLK
Sbjct: 408  QKIKMSLIAHLVGAGMAQLLPRIERTGPPEVLHVHLDGCIVGSIAAAKIEEVVNYLRSLK 467

Query: 548  LSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIGPFE 727
            L + SG+PEDLEVGY+PLS GGAYPGLYLFTNP+RFIRPVR+L   +DGG  IELIGPFE
Sbjct: 468  LLAHSGIPEDLEVGYVPLSLGGAYPGLYLFTNPARFIRPVRSLLGLSDGGPSIELIGPFE 527

Query: 728  QAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQ 907
            QAFMEIRC           FPATHEEIHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQ
Sbjct: 528  QAFMEIRCPDGGDGGRKELFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQ 587

Query: 908  TMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGYDME 1087
            TMGF GQAL++R D+K +HLQTPQ+PIVRT +Y+KYCMDEFP+GTNAIVAVL+YTGYDME
Sbjct: 588  TMGFCGQALKFRTDVKAFHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDME 647

Query: 1088 DAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFARSNTDRNMMFSIDSDGLPY 1267
            DAMILNKS+VDRG+ RGHIYQTE IDL++K   D   E F +SN  R+    IDSDGLP 
Sbjct: 648  DAMILNKSAVDRGMFRGHIYQTECIDLSEK-SRDNAVEFFCKSNLLRDTTAVIDSDGLPC 706

Query: 1268 VGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRTRRTR 1447
            +G+ + P E  YS  N LT   +P  LKGSE A IDYV+V+GT  KN LQK N+R RR R
Sbjct: 707  IGEKIFPNEQYYSVCNNLTGVVRPVKLKGSEPAAIDYVAVNGTNFKNRLQKANVRLRRVR 766

Query: 1448 DPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            +PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRP
Sbjct: 767  NPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRP 803


>tpg|DAA49470.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea mays]
          Length = 1162

 Score =  755 bits (1949), Expect = 0.0
 Identities = 365/517 (70%), Positives = 432/517 (83%)
 Frame = +2

Query: 8    QVKKIVGKNSTNFGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFRSVH 187
            +++K + K +T+ GR +ESMIKVG +N++SGLDLPQR+GMTI AERLNF RY+SHFRSVH
Sbjct: 397  EIRKFLTKYTTSVGRAVESMIKVGNVNSRSGLDLPQREGMTIHAERLNFHRYISHFRSVH 456

Query: 188  RGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKIKDP 367
            RG+AF KMRTTSVRKLLPESWGFLCPV+TPDGEPCGLLNHMT +CR+SS Y+SEG IK+ 
Sbjct: 457  RGSAFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSFYNSEGVIKNF 516

Query: 368  LKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIRSLK 547
             +++  + + LV +GM P+LPK+E+ GPPE+LHV LDGC++G+IAS  IE+AV ++R+LK
Sbjct: 517  GEMKKLLSAELVRVGMNPVLPKIEQTGPPEVLHVHLDGCILGTIASAMIEKAVNYLRTLK 576

Query: 548  LSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIGPFE 727
            L + SG+PEDLEVGY+P S+ GA+PGLYLFTNP+RF+RPVRNL   +DG   IELIGPFE
Sbjct: 577  LLAHSGIPEDLEVGYVPPSFNGAFPGLYLFTNPARFVRPVRNLFILSDGKQSIELIGPFE 636

Query: 728  QAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQ 907
            QAFMEIRC           FPATHEEIHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQ
Sbjct: 637  QAFMEIRCPDGGDGGRQEPFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQ 696

Query: 908  TMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGYDME 1087
            TMGF GQAL++R D+K +HLQTPQ+PIVRT +YTKYCMDEFP+GTNAIVAVL+YTGYDME
Sbjct: 697  TMGFCGQALKFRTDVKAFHLQTPQTPIVRTGTYTKYCMDEFPSGTNAIVAVLSYTGYDME 756

Query: 1088 DAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFARSNTDRNMMFSIDSDGLPY 1267
            DAMILNKS+V+RG+ RGHIYQTE IDL+ K   D + E FA+S   R+    IDSDGLP 
Sbjct: 757  DAMILNKSAVERGMFRGHIYQTECIDLSTK-SRDNVPETFAKSILTRDTSNVIDSDGLPR 815

Query: 1268 VGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRTRRTR 1447
            +GQ VHP E  YS HN+LT+  +P  LKG+E A IDYV+V+GTGSK  LQK NIR RR R
Sbjct: 816  LGQAVHPNEQYYSVHNSLTNVIRPVKLKGTEPAFIDYVAVNGTGSKCGLQKANIRLRRVR 875

Query: 1448 DPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            +PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRP
Sbjct: 876  NPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRP 912


>tpg|DAA49469.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea mays]
          Length = 1128

 Score =  755 bits (1949), Expect = 0.0
 Identities = 365/517 (70%), Positives = 432/517 (83%)
 Frame = +2

Query: 8    QVKKIVGKNSTNFGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFRSVH 187
            +++K + K +T+ GR +ESMIKVG +N++SGLDLPQR+GMTI AERLNF RY+SHFRSVH
Sbjct: 363  EIRKFLTKYTTSVGRAVESMIKVGNVNSRSGLDLPQREGMTIHAERLNFHRYISHFRSVH 422

Query: 188  RGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKIKDP 367
            RG+AF KMRTTSVRKLLPESWGFLCPV+TPDGEPCGLLNHMT +CR+SS Y+SEG IK+ 
Sbjct: 423  RGSAFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSFYNSEGVIKNF 482

Query: 368  LKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIRSLK 547
             +++  + + LV +GM P+LPK+E+ GPPE+LHV LDGC++G+IAS  IE+AV ++R+LK
Sbjct: 483  GEMKKLLSAELVRVGMNPVLPKIEQTGPPEVLHVHLDGCILGTIASAMIEKAVNYLRTLK 542

Query: 548  LSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIGPFE 727
            L + SG+PEDLEVGY+P S+ GA+PGLYLFTNP+RF+RPVRNL   +DG   IELIGPFE
Sbjct: 543  LLAHSGIPEDLEVGYVPPSFNGAFPGLYLFTNPARFVRPVRNLFILSDGKQSIELIGPFE 602

Query: 728  QAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQ 907
            QAFMEIRC           FPATHEEIHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQ
Sbjct: 603  QAFMEIRCPDGGDGGRQEPFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQ 662

Query: 908  TMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGYDME 1087
            TMGF GQAL++R D+K +HLQTPQ+PIVRT +YTKYCMDEFP+GTNAIVAVL+YTGYDME
Sbjct: 663  TMGFCGQALKFRTDVKAFHLQTPQTPIVRTGTYTKYCMDEFPSGTNAIVAVLSYTGYDME 722

Query: 1088 DAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFARSNTDRNMMFSIDSDGLPY 1267
            DAMILNKS+V+RG+ RGHIYQTE IDL+ K   D + E FA+S   R+    IDSDGLP 
Sbjct: 723  DAMILNKSAVERGMFRGHIYQTECIDLSTK-SRDNVPETFAKSILTRDTSNVIDSDGLPR 781

Query: 1268 VGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRTRRTR 1447
            +GQ VHP E  YS HN+LT+  +P  LKG+E A IDYV+V+GTGSK  LQK NIR RR R
Sbjct: 782  LGQAVHPNEQYYSVHNSLTNVIRPVKLKGTEPAFIDYVAVNGTGSKCGLQKANIRLRRVR 841

Query: 1448 DPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            +PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRP
Sbjct: 842  NPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRP 878


>ref|XP_004982736.1| PREDICTED: LOW QUALITY PROTEIN: probable DNA-directed RNA polymerase
            I subunit RPA2-like [Setaria italica]
          Length = 1172

 Score =  746 bits (1926), Expect = 0.0
 Identities = 366/517 (70%), Positives = 421/517 (81%)
 Frame = +2

Query: 8    QVKKIVGKNSTNFGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFRSVH 187
            +V+K + K++T  GR IESMIK+G++N+QSGLDLPQRDGMTI AERLNF RY+SHFRSVH
Sbjct: 410  EVRKFLTKHTTFVGRAIESMIKIGKVNSQSGLDLPQRDGMTIHAERLNFHRYISHFRSVH 469

Query: 188  RGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKIKDP 367
            RG+AF KMRTTSVRKLLPESWGFLCPV+TPDGEPCGLLNHMT +CRISS Y+SEG +KD 
Sbjct: 470  RGSAFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSVYNSEGVVKDF 529

Query: 368  LKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIRSLK 547
             KI+ S+   LV +GM P+LPK+ER GPPE+LHV LDGC++G+IAS +IEEA+       
Sbjct: 530  GKIKKSLSFELVRVGMNPVLPKIERTGPPEVLHVHLDGCILGTIASARIEEAI------- 582

Query: 548  LSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIGPFE 727
                   PEDLEVGY+PLS GGAYPGLYLFTNP+RF+RPV++L    DG   IELIGPFE
Sbjct: 583  -------PEDLEVGYVPLSLGGAYPGLYLFTNPARFVRPVKSLFGLPDGKQSIELIGPFE 635

Query: 728  QAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQ 907
            QAFMEIRC           FPATHEEIHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQ
Sbjct: 636  QAFMEIRCPDGGDGGRKEKFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQ 695

Query: 908  TMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGYDME 1087
            TMGF GQAL++R D+K +HLQTPQ+PIVRT +Y KYCMDEFP+GTNAIVAVLAYTGYDME
Sbjct: 696  TMGFCGQALKFRTDVKAFHLQTPQTPIVRTATYGKYCMDEFPSGTNAIVAVLAYTGYDME 755

Query: 1088 DAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFARSNTDRNMMFSIDSDGLPY 1267
            DAMILNKS+VDRG+ RGHIYQTE IDL+KK+  + + EIFA+S   R+   +IDSDGLP 
Sbjct: 756  DAMILNKSAVDRGMFRGHIYQTECIDLSKKNR-ENVPEIFAKSVLSRDTSTAIDSDGLPR 814

Query: 1268 VGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRTRRTR 1447
            +GQ VHP E  YS +N LT   +P  LKG+E A IDYV+V+G  SK   QK NIR RR R
Sbjct: 815  LGQTVHPNEQYYSVYNRLTGAIRPVRLKGTEPAFIDYVAVNGASSKGDFQKANIRLRRVR 874

Query: 1448 DPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            +PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRP
Sbjct: 875  NPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRP 911


>gb|EMS50874.1| putative DNA-directed RNA polymerase I subunit RPA2 [Triticum urartu]
          Length = 1253

 Score =  745 bits (1923), Expect = 0.0
 Identities = 370/517 (71%), Positives = 423/517 (81%)
 Frame = +2

Query: 8    QVKKIVGKNSTNFGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFRSVH 187
            +++K + K +T+ GR IE++IKVGR N+QS LDLPQR+GMTIQAERLNF RY+SHFRSVH
Sbjct: 340  EIRKFLSKYTTSVGRAIETLIKVGRANSQSMLDLPQREGMTIQAERLNFHRYISHFRSVH 399

Query: 188  RGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKIKDP 367
            RG++F KMRTT+VRKLLPESWGFLCPV+TPDGEPCGLLNHMT  CRISS Y+SEG IKD 
Sbjct: 400  RGSSFAKMRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSICRISSCYNSEGAIKDF 459

Query: 368  LKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIRSLK 547
             KI+  +L  LV  GM PLLPK+E  GPPEILHV LDGC+VGSIAS +IEE V ++R LK
Sbjct: 460  QKIKDKLLVELVRGGMIPLLPKMEHTGPPEILHVHLDGCIVGSIASAKIEEVVNYLRRLK 519

Query: 548  LSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIGPFE 727
            L +    PEDLEVGY+PLS GGAYPGLYLFT+P+RF+RPV+NL    DG   IELIGPFE
Sbjct: 520  LLAHPATPEDLEVGYVPLSLGGAYPGLYLFTSPARFVRPVKNLVSLPDGEPRIELIGPFE 579

Query: 728  QAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQ 907
            QAFMEIRC           FPATHEEIHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQ
Sbjct: 580  QAFMEIRCPDGGDGGRKKEFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQ 639

Query: 908  TMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGYDME 1087
            TMGF GQAL+YR D+K +HLQTPQSPIVRT +Y KY MDEFP+GTNAIVAVL+YTGYDME
Sbjct: 640  TMGFCGQALKYRTDVKAFHLQTPQSPIVRTATYKKYHMDEFPSGTNAIVAVLSYTGYDME 699

Query: 1088 DAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFARSNTDRNMMFSIDSDGLPY 1267
            DAMILNKS+VDRG+ RG I+QTE IDL+ K  T+ + EIFA+S   R+    IDSDGLP 
Sbjct: 700  DAMILNKSAVDRGMFRGDIFQTECIDLSAK-RTENVPEIFAKSPLSRDTNNVIDSDGLPR 758

Query: 1268 VGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRTRRTR 1447
            VG+ V P E  YS +NTLT   +P  LKG+E A+IDYV+++GT SK  LQKVNIR RR R
Sbjct: 759  VGETVVPYEQYYSIYNTLTGAIRPVRLKGTEPAVIDYVALNGTNSKGSLQKVNIRLRRKR 818

Query: 1448 DPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            +PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRP
Sbjct: 819  NPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRP 855


>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score =  742 bits (1916), Expect = 0.0
 Identities = 365/521 (70%), Positives = 431/521 (82%), Gaps = 2/521 (0%)
 Frame = +2

Query: 2    VTQVKKIVGKN-STNFGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFR 178
            +  VKK++ KN S      +E+M+K GRL TQSGLDL QR GMT+QAERLNFLR+LSHFR
Sbjct: 376  LAHVKKVMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFR 435

Query: 179  SVHRGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKI 358
            +VHRGA+F  +RTTSVRKLLPE+WGFLCPV+TPDGEPCGLLNHM  +CRI+S +DS G  
Sbjct: 436  AVHRGASFAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNT 495

Query: 359  KDPLKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIR 538
            +D  KIRMSILSVL+ IGMTP LPKL +AGPPE+L V+LDG VVGSI S ++E AV H+R
Sbjct: 496  RDFFKIRMSILSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLR 555

Query: 539  SLKLSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIG 718
             LK+S++S +P+DLEVGYIPLS GGAYPGLYLFT+PSRF+RPVRN++  ++ G+DIELIG
Sbjct: 556  RLKVSAISVIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIG 615

Query: 719  PFEQAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQM 898
            PFEQ +MEIRC           FPATHEEIHPTG+LSVVA+LTPWSDHNQSPRNMYQCQM
Sbjct: 616  PFEQVYMEIRCPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQM 675

Query: 899  AKQTMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGY 1078
             KQTM FS QA+  RAD K YHLQTPQ+PIVRT++Y KY MDEFPTGTNAIVAVLAY+GY
Sbjct: 676  GKQTMAFSSQAINCRADQKLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGY 735

Query: 1079 DMEDAMILNKSSVDRGLSRGHIYQTESIDLA-KKHETDRIQEIFARSNTDRNMMFSIDSD 1255
            DMEDAMILNKSSVDRGL  G IYQTE+IDL+ + +++DR Q +F RSN D++    IDSD
Sbjct: 736  DMEDAMILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSD 795

Query: 1256 GLPYVGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRT 1435
            GLPYVGQM++P EP  S +N +TS+T+ T LKGSE  I+DYV++D   +K + QKVNIR 
Sbjct: 796  GLPYVGQMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAK-NKKHPQKVNIRF 854

Query: 1436 RRTRDPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            RR R+PIIGDKFSSRHGQKGVCSQLWPD+DMPFS VTGMRP
Sbjct: 855  RRPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRP 895


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  742 bits (1916), Expect = 0.0
 Identities = 365/521 (70%), Positives = 431/521 (82%), Gaps = 2/521 (0%)
 Frame = +2

Query: 2    VTQVKKIVGKN-STNFGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFR 178
            +  VKK++ KN S      +E+M+K GRL TQSGLDL QR GMT+QAERLNFLR+LSHFR
Sbjct: 369  LAHVKKVMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFR 428

Query: 179  SVHRGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKI 358
            +VHRGA+F  +RTTSVRKLLPE+WGFLCPV+TPDGEPCGLLNHM  +CRI+S +DS G  
Sbjct: 429  AVHRGASFAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNT 488

Query: 359  KDPLKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIR 538
            +D  KIRMSILSVL+ IGMTP LPKL +AGPPE+L V+LDG VVGSI S ++E AV H+R
Sbjct: 489  RDFFKIRMSILSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLR 548

Query: 539  SLKLSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIG 718
             LK+S++S +P+DLEVGYIPLS GGAYPGLYLFT+PSRF+RPVRN++  ++ G+DIELIG
Sbjct: 549  RLKVSAISVIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIG 608

Query: 719  PFEQAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQM 898
            PFEQ +MEIRC           FPATHEEIHPTG+LSVVA+LTPWSDHNQSPRNMYQCQM
Sbjct: 609  PFEQVYMEIRCPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQM 668

Query: 899  AKQTMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGY 1078
             KQTM FS QA+  RAD K YHLQTPQ+PIVRT++Y KY MDEFPTGTNAIVAVLAY+GY
Sbjct: 669  GKQTMAFSSQAINCRADQKLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGY 728

Query: 1079 DMEDAMILNKSSVDRGLSRGHIYQTESIDLA-KKHETDRIQEIFARSNTDRNMMFSIDSD 1255
            DMEDAMILNKSSVDRGL  G IYQTE+IDL+ + +++DR Q +F RSN D++    IDSD
Sbjct: 729  DMEDAMILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSD 788

Query: 1256 GLPYVGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRT 1435
            GLPYVGQM++P EP  S +N +TS+T+ T LKGSE  I+DYV++D   +K + QKVNIR 
Sbjct: 789  GLPYVGQMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAK-NKKHPQKVNIRF 847

Query: 1436 RRTRDPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            RR R+PIIGDKFSSRHGQKGVCSQLWPD+DMPFS VTGMRP
Sbjct: 848  RRPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRP 888


>gb|EEE51207.1| hypothetical protein OsJ_32024 [Oryza sativa Japonica Group]
          Length = 1150

 Score =  742 bits (1916), Expect = 0.0
 Identities = 361/517 (69%), Positives = 421/517 (81%)
 Frame = +2

Query: 8    QVKKIVGKNSTNFGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFRSVH 187
            +V+K + K S   G+ I+SMIKVG++N+QSGLDLPQRDGMTI AERLNF RY+SHFRSVH
Sbjct: 399  EVRKFLSKTSAYVGKAIQSMIKVGKVNSQSGLDLPQRDGMTIHAERLNFHRYISHFRSVH 458

Query: 188  RGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKIKDP 367
            RG++F KMRTTSVRKLLPESWGFLCPV+TPDGEPCGLLNHMT +CRISS Y+SEG  KD 
Sbjct: 459  RGSSFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYNSEGATKDF 518

Query: 368  LKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIRSLK 547
             KI+MS+++ LV  GM  LLP++ER GPPE+LHV +DGC+VGSIAS +IEE +       
Sbjct: 519  QKIKMSLIARLVGAGMAQLLPRIERTGPPEVLHVHVDGCIVGSIASAKIEEVI------- 571

Query: 548  LSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIGPFE 727
                   PEDLEVGY+PLS+GGAYPGLYLFTNP+RF+RPVR+L   ++GG +IELIGPFE
Sbjct: 572  -------PEDLEVGYVPLSHGGAYPGLYLFTNPARFLRPVRSLLGLSNGGPNIELIGPFE 624

Query: 728  QAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQ 907
            QAFMEIRC           FPATHEEIHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQ
Sbjct: 625  QAFMEIRCPDGGDGGRNKLFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQ 684

Query: 908  TMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGYDME 1087
            TMGF GQAL++R D+K +HLQTPQ+PIVRT +Y+KYCMDEFP+GTNAIVAVL+YTGYDME
Sbjct: 685  TMGFCGQALKFRTDVKAFHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDME 744

Query: 1088 DAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFARSNTDRNMMFSIDSDGLPY 1267
            DAMILNKS+VDRG+ RGHI+QTE IDL+ K   D + E F +SN  R+   +I+SDGLP 
Sbjct: 745  DAMILNKSAVDRGMFRGHIFQTECIDLSAK-SRDNVTEFFCKSNLSRDTTAAIESDGLPR 803

Query: 1268 VGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRTRRTR 1447
            +G+ + P E  YS  N LT T +P  LKGSE A IDYV+V+GT  K+ LQK NIR RR R
Sbjct: 804  IGENIFPNEQYYSVCNNLTGTVRPIKLKGSEPAAIDYVAVNGTNFKDRLQKANIRLRRVR 863

Query: 1448 DPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            +PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRP
Sbjct: 864  NPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRP 900


>gb|EEC67242.1| hypothetical protein OsI_34174 [Oryza sativa Indica Group]
          Length = 1086

 Score =  742 bits (1916), Expect = 0.0
 Identities = 361/517 (69%), Positives = 421/517 (81%)
 Frame = +2

Query: 8    QVKKIVGKNSTNFGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFRSVH 187
            +V+K + K S   G+ I+SMIKVG++N+QSGLDLPQRDGMTI AERLNF RY+SHFRSVH
Sbjct: 335  EVRKFLSKTSAYVGKAIQSMIKVGKVNSQSGLDLPQRDGMTIHAERLNFHRYISHFRSVH 394

Query: 188  RGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKIKDP 367
            RG++F KMRTTSVRKLLPESWGFLCPV+TPDGEPCGLLNHMT +CRISS Y+SEG  KD 
Sbjct: 395  RGSSFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYNSEGATKDF 454

Query: 368  LKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIRSLK 547
             KI+MS+++ LV  GM  LLP++ER GPPE+LHV +DGC+VGSIAS +IEE +       
Sbjct: 455  QKIKMSLIARLVGAGMAQLLPRIERTGPPEVLHVHVDGCIVGSIASAKIEEVI------- 507

Query: 548  LSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIGPFE 727
                   PEDLEVGY+PLS+GGAYPGLYLFTNP+RF+RPVR+L   ++GG +IELIGPFE
Sbjct: 508  -------PEDLEVGYVPLSHGGAYPGLYLFTNPARFLRPVRSLLGLSNGGPNIELIGPFE 560

Query: 728  QAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQ 907
            QAFMEIRC           FPATHEEIHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQ
Sbjct: 561  QAFMEIRCPDGGDGGRNKLFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQ 620

Query: 908  TMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGYDME 1087
            TMGF GQAL++R D+K +HLQTPQ+PIVRT +Y+KYCMDEFP+GTNAIVAVL+YTGYDME
Sbjct: 621  TMGFCGQALKFRTDVKAFHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDME 680

Query: 1088 DAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFARSNTDRNMMFSIDSDGLPY 1267
            DAMILNKS+VDRG+ RGHI+QTE IDL+ K   D + E F +SN  R+   +I+SDGLP 
Sbjct: 681  DAMILNKSAVDRGMFRGHIFQTECIDLSAK-SRDNVTEFFCKSNLSRDTTAAIESDGLPR 739

Query: 1268 VGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRTRRTR 1447
            +G+ + P E  YS  N LT T +P  LKGSE A IDYV+V+GT  K+ LQK NIR RR R
Sbjct: 740  IGENIFPNEQYYSVCNNLTGTVRPIKLKGSEPAAIDYVAVNGTNFKDRLQKANIRLRRVR 799

Query: 1448 DPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            +PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRP
Sbjct: 800  NPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRP 836


>gb|ABB47823.2| DNA-directed RNA polymerase, beta subunit family protein, expressed
            [Oryza sativa Japonica Group]
          Length = 1044

 Score =  742 bits (1916), Expect = 0.0
 Identities = 361/517 (69%), Positives = 421/517 (81%)
 Frame = +2

Query: 8    QVKKIVGKNSTNFGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFRSVH 187
            +V+K + K S   G+ I+SMIKVG++N+QSGLDLPQRDGMTI AERLNF RY+SHFRSVH
Sbjct: 293  EVRKFLSKTSAYVGKAIQSMIKVGKVNSQSGLDLPQRDGMTIHAERLNFHRYISHFRSVH 352

Query: 188  RGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKIKDP 367
            RG++F KMRTTSVRKLLPESWGFLCPV+TPDGEPCGLLNHMT +CRISS Y+SEG  KD 
Sbjct: 353  RGSSFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYNSEGATKDF 412

Query: 368  LKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIRSLK 547
             KI+MS+++ LV  GM  LLP++ER GPPE+LHV +DGC+VGSIAS +IEE +       
Sbjct: 413  QKIKMSLIARLVGAGMAQLLPRIERTGPPEVLHVHVDGCIVGSIASAKIEEVI------- 465

Query: 548  LSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIGPFE 727
                   PEDLEVGY+PLS+GGAYPGLYLFTNP+RF+RPVR+L   ++GG +IELIGPFE
Sbjct: 466  -------PEDLEVGYVPLSHGGAYPGLYLFTNPARFLRPVRSLLGLSNGGPNIELIGPFE 518

Query: 728  QAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQ 907
            QAFMEIRC           FPATHEEIHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQ
Sbjct: 519  QAFMEIRCPDGGDGGRNKLFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQ 578

Query: 908  TMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGYDME 1087
            TMGF GQAL++R D+K +HLQTPQ+PIVRT +Y+KYCMDEFP+GTNAIVAVL+YTGYDME
Sbjct: 579  TMGFCGQALKFRTDVKAFHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDME 638

Query: 1088 DAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFARSNTDRNMMFSIDSDGLPY 1267
            DAMILNKS+VDRG+ RGHI+QTE IDL+ K   D + E F +SN  R+   +I+SDGLP 
Sbjct: 639  DAMILNKSAVDRGMFRGHIFQTECIDLSAK-SRDNVTEFFCKSNLSRDTTAAIESDGLPR 697

Query: 1268 VGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRTRRTR 1447
            +G+ + P E  YS  N LT T +P  LKGSE A IDYV+V+GT  K+ LQK NIR RR R
Sbjct: 698  IGENIFPNEQYYSVCNNLTGTVRPIKLKGSEPAAIDYVAVNGTNFKDRLQKANIRLRRVR 757

Query: 1448 DPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            +PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRP
Sbjct: 758  NPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRP 794


>dbj|BAK06737.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 978

 Score =  741 bits (1913), Expect = 0.0
 Identities = 367/517 (70%), Positives = 422/517 (81%)
 Frame = +2

Query: 8    QVKKIVGKNSTNFGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFRSVH 187
            +++K + K +T+ GR IE++IKVGR N+QS LDLPQR+GMTIQAERLNF RY+SHFRSVH
Sbjct: 416  EIRKFLSKYTTSVGRAIEALIKVGRANSQSMLDLPQREGMTIQAERLNFHRYISHFRSVH 475

Query: 188  RGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKIKDP 367
            RG++F KMRTT+VRKLLPESWGFLCPV+TPDGEPCGLLNHMT +CRISS Y+SEG IKD 
Sbjct: 476  RGSSFAKMRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSCYNSEGAIKDF 535

Query: 368  LKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIRSLK 547
             KI+  +L  LV  GM PLLPK+E  GPPEI+HV LDGC+VGSIAS +IEE V ++R LK
Sbjct: 536  QKIKDKLLVELVRGGMIPLLPKMEHTGPPEIMHVHLDGCIVGSIASAKIEEVVNYLRRLK 595

Query: 548  LSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIGPFE 727
            L +    PEDLEVGY+PLS GGAYPGLYLFT+P+RF+RPV+NL    DG   IELIGPFE
Sbjct: 596  LLAHPATPEDLEVGYVPLSLGGAYPGLYLFTSPARFVRPVKNLVSLPDGEPHIELIGPFE 655

Query: 728  QAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQ 907
            QAFMEIRC           FPATHEEIHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQ
Sbjct: 656  QAFMEIRCPDGGDGGRKEKFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQ 715

Query: 908  TMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGYDME 1087
            TMGF GQAL++R D+K +HLQTPQSPIVRT +Y KY MDEFP+GTNAIVAVL+YTGYDME
Sbjct: 716  TMGFCGQALKFRTDVKAFHLQTPQSPIVRTATYKKYHMDEFPSGTNAIVAVLSYTGYDME 775

Query: 1088 DAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFARSNTDRNMMFSIDSDGLPY 1267
            DAMILNKS+VDRG+ RG I+QTE IDL+ K  T+ + EIFA+S   +     IDSDGLP 
Sbjct: 776  DAMILNKSAVDRGMFRGDIFQTECIDLSAK-RTENVPEIFAKSPLSKGTGDVIDSDGLPR 834

Query: 1268 VGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRTRRTR 1447
            VG+ V P E  YS +NTLT   +P  LKG+E A IDYV+++GT SK  LQKVNIR RR R
Sbjct: 835  VGETVVPYEQYYSVYNTLTGAIRPVRLKGTEPAAIDYVALNGTNSKGSLQKVNIRLRRKR 894

Query: 1448 DPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            +PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRP
Sbjct: 895  NPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRP 931


>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
            lycopersicum]
          Length = 1184

 Score =  738 bits (1905), Expect = 0.0
 Identities = 365/521 (70%), Positives = 423/521 (81%), Gaps = 2/521 (0%)
 Frame = +2

Query: 2    VTQVKKIVGKNSTN-FGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFR 178
            +T VKK + KN+    G  IESM+K GRL TQSGLDL QR GMT+QAE+LNFLR+LSHFR
Sbjct: 422  LTDVKKAIEKNAPKQIGLTIESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFR 481

Query: 179  SVHRGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKI 358
            +VHRGA+F  +RTTSVRKLLPESWGFLCPV+TPDGEPCGLLNHMT SCRI+S YDS+G +
Sbjct: 482  AVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNV 541

Query: 359  KDPLKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIR 538
            KD  K+RMSIL+VL+AIGMTP  PKL +AGPPE+L VLLDG + G I S  IE+AV H+R
Sbjct: 542  KDFFKMRMSILNVLIAIGMTPSSPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHLR 601

Query: 539  SLKLSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIG 718
             LKLSS S +P DLEVGYIPLS  GAYPGLYLFT+PSRF+RPVRN++   + GND+ELIG
Sbjct: 602  RLKLSSTSSIPVDLEVGYIPLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIG 661

Query: 719  PFEQAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQM 898
            PFEQ +MEI C           FPATH EIHPT ILSVV NLTPWSDHNQSPRNMYQCQM
Sbjct: 662  PFEQVYMEISCPDGGDGGRKTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQM 721

Query: 899  AKQTMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGY 1078
             KQTMGFS QAL  RAD K YHLQTPQ+PIVRT +Y KYC+D++P GTNAIVAVLAY+GY
Sbjct: 722  GKQTMGFSSQALNCRADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGY 781

Query: 1079 DMEDAMILNKSSVDRGLSRGHIYQTESIDLAKKH-ETDRIQEIFARSNTDRNMMFSIDSD 1255
            DMEDAM+LNKSSVDRG+  GHIYQTE+IDL ++  ++DR Q +F RSN D++    IDSD
Sbjct: 782  DMEDAMVLNKSSVDRGMCHGHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDSD 841

Query: 1256 GLPYVGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRT 1435
            GLPYVGQ ++P EP  S +N +TS T    LKGSE  ++DYV+VD   +K +LQK NIR 
Sbjct: 842  GLPYVGQRINPNEPYCSIYNEITSQTTCMKLKGSEPVVVDYVAVD-VKNKAHLQKANIRF 900

Query: 1436 RRTRDPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            RR+R+P+IGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP
Sbjct: 901  RRSRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 941


>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            [Solanum tuberosum]
          Length = 1179

 Score =  736 bits (1900), Expect = 0.0
 Identities = 362/521 (69%), Positives = 422/521 (80%), Gaps = 2/521 (0%)
 Frame = +2

Query: 2    VTQVKKIVGKNSTN-FGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFR 178
            +T VKK + KN+    G  IESM+K GRL TQSGLDL QR GMT+QAE+LNFLR+LSHFR
Sbjct: 417  LTDVKKAIEKNAPKQIGLAIESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFR 476

Query: 179  SVHRGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKI 358
            +VHRGA+F  +RTTSVRKLLPESWGFLCPV+TPDGEPCGLLNHMT SCRI+S YDS+G +
Sbjct: 477  AVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNV 536

Query: 359  KDPLKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIR 538
            KD  K+RMSIL+VL+AIGMTP  PKL + GPPE+L VLLDG + G I S  IE+AV H+R
Sbjct: 537  KDFFKMRMSILNVLIAIGMTPPSPKLVQGGPPELLSVLLDGRIAGYIPSDLIEKAVTHLR 596

Query: 539  SLKLSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIG 718
             LKLSS S +P DLEVGYIPLS  GAYPGLYLFT+PSRF+RPVRN++   + GND+EL+G
Sbjct: 597  RLKLSSTSSIPVDLEVGYIPLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELVG 656

Query: 719  PFEQAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQM 898
            PFEQ +MEI C           FPATH EIHPT ILSVV NLTPWSDHNQSPRNMYQCQM
Sbjct: 657  PFEQVYMEISCPDGGDGGRKTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQM 716

Query: 899  AKQTMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGY 1078
             KQTMGFS QAL  RAD K YHLQTPQ+PIVRT +Y KYC+D++P GTNAIVAVLAY+GY
Sbjct: 717  GKQTMGFSSQALNCRADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGY 776

Query: 1079 DMEDAMILNKSSVDRGLSRGHIYQTESIDLAKKH-ETDRIQEIFARSNTDRNMMFSIDSD 1255
            DMEDAM+LNKSSVDRG+  GHIYQTE+IDL ++  ++DR Q +F RSN D++    ID+D
Sbjct: 777  DMEDAMVLNKSSVDRGMCHGHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDTD 836

Query: 1256 GLPYVGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRT 1435
            GLPYVGQ ++P EP  S +N +TS T    LKGSE  ++DYV+VD   +K +LQK NIR 
Sbjct: 837  GLPYVGQRINPNEPYCSIYNEITSQTTSMKLKGSEPVVVDYVAVD-VKNKTHLQKANIRF 895

Query: 1436 RRTRDPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            RR+R+P+IGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP
Sbjct: 896  RRSRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 936


>ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Brachypodium
            distachyon]
          Length = 1181

 Score =  736 bits (1899), Expect = 0.0
 Identities = 364/517 (70%), Positives = 420/517 (81%)
 Frame = +2

Query: 8    QVKKIVGKNSTNFGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFRSVH 187
            +++K + K+ST+ GR IES+IK+GR N+QS LDLPQR+GM+IQAERLNF RY+SHFRSVH
Sbjct: 414  EIRKFLCKHSTSVGRAIESLIKIGRANSQSMLDLPQREGMSIQAERLNFHRYISHFRSVH 473

Query: 188  RGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKIKDP 367
            RG+AF KMRTT+VRKLLPESWGFLCPV+TPDGEPCGLLNHMT +CRISS Y SEG +KD 
Sbjct: 474  RGSAFAKMRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSACRISSFYHSEGAMKDF 533

Query: 368  LKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIRSLK 547
             KI+  +L+ LV  GM PL PK+E  GPPE+LHV LDGC+VGSI S +IEE V +IR LK
Sbjct: 534  EKIKDRLLAELVRGGMIPLSPKMEHTGPPEVLHVHLDGCIVGSIGSAKIEELVNYIRRLK 593

Query: 548  LSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIGPFE 727
            L +    PEDLEVGY+PLS GGAYPGLY FT+P+RF+RPV+NL    DG   IELIG FE
Sbjct: 594  LLAHPATPEDLEVGYVPLSIGGAYPGLYFFTSPARFVRPVKNLVSLPDGEPHIELIGAFE 653

Query: 728  QAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQ 907
            QAFMEIRC           FPATHEEIHPT +LSVVANLTPWS+HNQSPRNMYQCQMAKQ
Sbjct: 654  QAFMEIRCPDGGDGGRKESFPATHEEIHPTAMLSVVANLTPWSEHNQSPRNMYQCQMAKQ 713

Query: 908  TMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGYDME 1087
            TMGF GQAL++R D+K +HLQTPQSPIVRT +Y KY MDEFP+GTNAIVAVL+YTGYDME
Sbjct: 714  TMGFCGQALKFRTDVKAFHLQTPQSPIVRTATYKKYHMDEFPSGTNAIVAVLSYTGYDME 773

Query: 1088 DAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFARSNTDRNMMFSIDSDGLPY 1267
            DAMILNKS+VDRG+ RG IYQTE IDL+       + EIFA+S+  R+    IDSDGLP 
Sbjct: 774  DAMILNKSAVDRGMFRGDIYQTECIDLSTTRR-GSVAEIFAKSSLSRDSSSVIDSDGLPR 832

Query: 1268 VGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRTRRTR 1447
            VG+ + P E  YST+NTLT   +PT LKG+E A IDYV+V+GT SK  LQKVNIR RR R
Sbjct: 833  VGETIVPNEQYYSTYNTLTGAIRPTRLKGTEPAAIDYVAVNGTNSKGSLQKVNIRLRRKR 892

Query: 1448 DPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            +PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRP
Sbjct: 893  NPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRP 929


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score =  733 bits (1891), Expect = 0.0
 Identities = 360/521 (69%), Positives = 428/521 (82%), Gaps = 2/521 (0%)
 Frame = +2

Query: 2    VTQVKKIVGKN-STNFGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFR 178
            V  VKK++ KN ST     +E+M+K GRL TQ+GLDL QR G T+QAERLNFLR+LS FR
Sbjct: 392  VLDVKKVIDKNPSTTISLAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSFFR 451

Query: 179  SVHRGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKI 358
            +VHRGA+F  +RTTSVRKLLPESWGFLCPV+TPDGEPCGLLNHMT SCRI+S +DS+G +
Sbjct: 452  AVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRSCRITSYFDSQGAV 511

Query: 359  KDPLKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIR 538
            KD   IR SIL VL ++GMT  LPKL +AGPP++L VLLDG VVGSI S Q+E+ V H+R
Sbjct: 512  KDFFDIRKSILGVLTSLGMTSSLPKLVQAGPPQVLSVLLDGRVVGSIPSSQVEKVVVHLR 571

Query: 539  SLKLSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIG 718
             LK+++ S +P+DLEVGY+PLS GGA+PGLYLFT+PSRFIRPV+N++     G +IELIG
Sbjct: 572  RLKVAASSVIPDDLEVGYVPLSMGGAFPGLYLFTSPSRFIRPVKNISIPAGEGENIELIG 631

Query: 719  PFEQAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQM 898
            PFEQ FMEIRC           FPATHEEIHPT +LSVVANLTPWSDHNQSPRNMYQCQM
Sbjct: 632  PFEQVFMEIRCPDGGNGGRSDAFPATHEEIHPTDMLSVVANLTPWSDHNQSPRNMYQCQM 691

Query: 899  AKQTMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGY 1078
            AKQTM FS Q+L++RAD K YHLQTPQ+PIVRT+SYTKYC+DE+PTGTNAIVAVLAYTGY
Sbjct: 692  AKQTMAFSLQSLRFRADQKLYHLQTPQTPIVRTSSYTKYCVDEYPTGTNAIVAVLAYTGY 751

Query: 1079 DMEDAMILNKSSVDRGLSRGHIYQTESIDLAKK-HETDRIQEIFARSNTDRNMMFSIDSD 1255
            DMEDAMILNKSSV+RG+  G IYQTE+IDL+++   +DR Q +F RSN D+++   IDSD
Sbjct: 752  DMEDAMILNKSSVERGMCHGQIYQTETIDLSEEGSRSDRAQRMFRRSNIDKSLHSVIDSD 811

Query: 1256 GLPYVGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRT 1435
            GLPYVGQM+HP EP  S +N +T+TT+    KGS+  I+DYV++D T +K +LQKVNIR 
Sbjct: 812  GLPYVGQMIHPNEPYCSIYNEITNTTRTNNRKGSDPVIVDYVAID-TKNKKHLQKVNIRF 870

Query: 1436 RRTRDPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            R  R+PIIGDKFSSRHGQKGVCSQLWPD+DMPFS VTGMRP
Sbjct: 871  RHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRP 911


>gb|EMT17614.1| DNA-directed RNA polymerase I subunit RPA2 [Aegilops tauschii]
          Length = 1856

 Score =  731 bits (1888), Expect = 0.0
 Identities = 370/540 (68%), Positives = 422/540 (78%), Gaps = 23/540 (4%)
 Frame = +2

Query: 8    QVKKIVGKNSTNFGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFRSVH 187
            +++K + K +T+ GR IE++IKVGR N+QS LDLPQR+GMTIQAERLNF RY+SHFRSVH
Sbjct: 417  EIRKFLSKYTTSVGRAIETLIKVGRANSQSMLDLPQREGMTIQAERLNFHRYISHFRSVH 476

Query: 188  RGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKIKDP 367
            RG++F KMRTT+VRKLLPESWGFLCPV+TPDGEPCGLLNHMT  CRISS Y+SEG IKD 
Sbjct: 477  RGSSFAKMRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSICRISSCYNSEGAIKDF 536

Query: 368  LKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIRSLK 547
             KI+  +L  LV  GM PLLPK+E  GPPE+LHV LDGC+VGSIAS +IEE V ++R LK
Sbjct: 537  QKIKDKLLVELVRGGMIPLLPKMEHTGPPEVLHVHLDGCIVGSIASAKIEEVVNYLRRLK 596

Query: 548  LSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIGPFE 727
            L +    PEDLEVGY+PLS GGAYPGLYLFT+P+RF+RPV+NL    DG   IELIGPFE
Sbjct: 597  LLAHPATPEDLEVGYVPLSLGGAYPGLYLFTSPARFVRPVKNLVSLPDGETRIELIGPFE 656

Query: 728  QAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQ 907
            QAFMEIRC           FPATHEEIHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQ
Sbjct: 657  QAFMEIRCPDGGDGGRKKEFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQ 716

Query: 908  TMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGYDME 1087
            TMGF GQAL+YR D+K +HLQTPQSPIVRT +Y KY MDEFP+GTNAIVAVL+YTGYDME
Sbjct: 717  TMGFCGQALKYRTDVKAFHLQTPQSPIVRTATYKKYHMDEFPSGTNAIVAVLSYTGYDME 776

Query: 1088 DAMILNKSSVDRGLSRGHIYQTESIDLAKKHETDRIQEIFARSNTDRNMMFSIDSDGLPY 1267
            DAMILNKS+VDRG+ RG I+QTE IDL+ K  T+ + EIFA+S   R+    IDSDGLP 
Sbjct: 777  DAMILNKSAVDRGMFRGDIFQTECIDLSAK-RTENVPEIFAKSPLSRDTDNVIDSDGLPR 835

Query: 1268 VG-----------------------QMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDY 1378
            VG                       Q V P E  YS +NTLT   +P  LKG+E A IDY
Sbjct: 836  VGERKEKWSSFFLRYCPYSEMYFCEQTVVPYEQYYSIYNTLTGAIRPVRLKGTEPAAIDY 895

Query: 1379 VSVDGTGSKNYLQKVNIRTRRTRDPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            V+++GT SK  LQKVNIR RR R+PIIGDKFSSRHGQKGVCSQLWPD+DMPFSA TGMRP
Sbjct: 896  VALNGTNSKGSLQKVNIRLRRKRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRP 955


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
            [Glycine max]
          Length = 1175

 Score =  723 bits (1867), Expect = 0.0
 Identities = 355/521 (68%), Positives = 423/521 (81%), Gaps = 2/521 (0%)
 Frame = +2

Query: 2    VTQVKKIVGKNSTN-FGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFR 178
            + QVKK++ KNS       +E+M+K GRL TQ+GLDL QR G T+QAERLNFLR+LSHFR
Sbjct: 407  IVQVKKVMDKNSPKQVSTAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFR 466

Query: 179  SVHRGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKI 358
            +VHRGA+F  +RTT+VRKLLPESWGFLCPV+TPDGEPCGLLNHMTC+ RI+S +DS+G I
Sbjct: 467  AVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNI 526

Query: 359  KDPLKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIR 538
            KD  KI+MSIL+VL+ +GMTP LPK+   GPPE L VLLDGCVVG IAS ++E+ VAHIR
Sbjct: 527  KDYFKIKMSILNVLLEVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIR 586

Query: 539  SLKLSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIG 718
             LK+SS++ +P+D+EVGY+PLS GGAYPGLYL T+PSRF+RPVRN++  +DG  +IELIG
Sbjct: 587  ELKVSSVAVIPDDMEVGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIG 646

Query: 719  PFEQAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQM 898
            PFEQ FMEIRC           FPATHEEIHPT +LSVVANLTPWSDHNQSPRNMYQCQM
Sbjct: 647  PFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQM 706

Query: 899  AKQTMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGY 1078
            AKQTM FS Q +Q+RAD K YHLQTPQ+PIVRT++YTKY +DEFPTGTNAIVAVLAYTGY
Sbjct: 707  AKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGY 766

Query: 1079 DMEDAMILNKSSVDRGLSRGHIYQTESIDLAKK-HETDRIQEIFARSNTDRNMMFSIDSD 1255
            DMEDAMILNKSSV+RG+  G IYQTE+IDL ++   +DR   +F +SN +++   SIDSD
Sbjct: 767  DMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSD 826

Query: 1256 GLPYVGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRT 1435
            GLP+VGQM+ P EP  S +N +TS+      KGSE   +DYV+ D   +K +LQKVNIR 
Sbjct: 827  GLPHVGQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAAD-VKNKKHLQKVNIRF 885

Query: 1436 RRTRDPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            R  R+P+IGDKFSSRHGQKGVCSQLWPDVDMPFS  TGMRP
Sbjct: 886  RHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGTTGMRP 926


>ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X2 [Citrus sinensis]
          Length = 954

 Score =  715 bits (1846), Expect = 0.0
 Identities = 351/521 (67%), Positives = 420/521 (80%), Gaps = 2/521 (0%)
 Frame = +2

Query: 2    VTQVKKIVGKN-STNFGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFR 178
            +  +KK++ KN S   G  IE+M+K GRL TQ+GLDL QR G T+QAERLNFLR++S FR
Sbjct: 407  LANIKKVMEKNPSKQIGTSIETMLKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFR 466

Query: 179  SVHRGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKI 358
            +VHRGA+F  +RTTSVRKLLPESWGFLCPV+TPDGEPCGLLNHMT +CR++S YDS G I
Sbjct: 467  AVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNI 526

Query: 359  KDPLKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIR 538
            +D  K+R SIL VL+ +GM P LPKL ++GPP +L VLLDG VVG I S +IE+ VAH+R
Sbjct: 527  RDFSKMRTSILRVLIGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLR 586

Query: 539  SLKLSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIG 718
             LK+S+ S +P+DLEVGY+PLS GGAYPGLYLFT+P +F+RPVRN++  ++   +IELIG
Sbjct: 587  RLKVSAASVIPDDLEVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIG 646

Query: 719  PFEQAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQM 898
            PFEQ FMEIRC           FPATHEEIHPTG+LSVVANLTP+SDHNQSPRNMYQCQM
Sbjct: 647  PFEQVFMEIRCPDGGDGGRRNAFPATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQM 706

Query: 899  AKQTMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGY 1078
            AKQTMGFS QAL++RAD K YHLQTPQ+PIVRT +YTKY +DE+PTGTNAIVAVLAYTGY
Sbjct: 707  AKQTMGFSVQALKFRADQKLYHLQTPQTPIVRTNTYTKYSIDEYPTGTNAIVAVLAYTGY 766

Query: 1079 DMEDAMILNKSSVDRGLSRGHIYQTESIDLAKK-HETDRIQEIFARSNTDRNMMFSIDSD 1255
            DMEDAMILNKSSVDRG+  G IYQTE+IDL+   ++ DR Q++F R+   +++   IDSD
Sbjct: 767  DMEDAMILNKSSVDRGMCHGQIYQTETIDLSDDGNKVDRGQKLFRRNKDAKSLHSVIDSD 826

Query: 1256 GLPYVGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRT 1435
            GLPYVGQM+HP EP  S ++  T++ +    KGSE   +DYV+VD   SKN  QK NIR 
Sbjct: 827  GLPYVGQMIHPGEPYCSIYDKTTNSWRTNSRKGSESVFVDYVAVDMKNSKNLPQKANIRF 886

Query: 1436 RRTRDPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            R TR+PIIGDKFSSRHGQKGVCSQLWPD+DMPFS VTGMRP
Sbjct: 887  RHTRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRP 927


>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Citrus sinensis]
          Length = 1175

 Score =  715 bits (1846), Expect = 0.0
 Identities = 351/521 (67%), Positives = 420/521 (80%), Gaps = 2/521 (0%)
 Frame = +2

Query: 2    VTQVKKIVGKN-STNFGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFR 178
            +  +KK++ KN S   G  IE+M+K GRL TQ+GLDL QR G T+QAERLNFLR++S FR
Sbjct: 407  LANIKKVMEKNPSKQIGTSIETMLKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFR 466

Query: 179  SVHRGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKI 358
            +VHRGA+F  +RTTSVRKLLPESWGFLCPV+TPDGEPCGLLNHMT +CR++S YDS G I
Sbjct: 467  AVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNI 526

Query: 359  KDPLKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIR 538
            +D  K+R SIL VL+ +GM P LPKL ++GPP +L VLLDG VVG I S +IE+ VAH+R
Sbjct: 527  RDFSKMRTSILRVLIGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLR 586

Query: 539  SLKLSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIG 718
             LK+S+ S +P+DLEVGY+PLS GGAYPGLYLFT+P +F+RPVRN++  ++   +IELIG
Sbjct: 587  RLKVSAASVIPDDLEVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIG 646

Query: 719  PFEQAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQM 898
            PFEQ FMEIRC           FPATHEEIHPTG+LSVVANLTP+SDHNQSPRNMYQCQM
Sbjct: 647  PFEQVFMEIRCPDGGDGGRRNAFPATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQM 706

Query: 899  AKQTMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGY 1078
            AKQTMGFS QAL++RAD K YHLQTPQ+PIVRT +YTKY +DE+PTGTNAIVAVLAYTGY
Sbjct: 707  AKQTMGFSVQALKFRADQKLYHLQTPQTPIVRTNTYTKYSIDEYPTGTNAIVAVLAYTGY 766

Query: 1079 DMEDAMILNKSSVDRGLSRGHIYQTESIDLAKK-HETDRIQEIFARSNTDRNMMFSIDSD 1255
            DMEDAMILNKSSVDRG+  G IYQTE+IDL+   ++ DR Q++F R+   +++   IDSD
Sbjct: 767  DMEDAMILNKSSVDRGMCHGQIYQTETIDLSDDGNKVDRGQKLFRRNKDAKSLHSVIDSD 826

Query: 1256 GLPYVGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRT 1435
            GLPYVGQM+HP EP  S ++  T++ +    KGSE   +DYV+VD   SKN  QK NIR 
Sbjct: 827  GLPYVGQMIHPGEPYCSIYDKTTNSWRTNSRKGSESVFVDYVAVDMKNSKNLPQKANIRF 886

Query: 1436 RRTRDPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            R TR+PIIGDKFSSRHGQKGVCSQLWPD+DMPFS VTGMRP
Sbjct: 887  RHTRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRP 927


>ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citrus clementina]
            gi|557530116|gb|ESR41366.1| hypothetical protein
            CICLE_v10024768mg [Citrus clementina]
          Length = 1082

 Score =  715 bits (1846), Expect = 0.0
 Identities = 351/521 (67%), Positives = 420/521 (80%), Gaps = 2/521 (0%)
 Frame = +2

Query: 2    VTQVKKIVGKN-STNFGRVIESMIKVGRLNTQSGLDLPQRDGMTIQAERLNFLRYLSHFR 178
            +  +KK++ KN S   G  IE+M+K GRL TQ+GLDL QR G T+QAERLNFLR++S FR
Sbjct: 314  LANIKKVMEKNPSKQIGTSIETMLKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFR 373

Query: 179  SVHRGAAFTKMRTTSVRKLLPESWGFLCPVNTPDGEPCGLLNHMTCSCRISSSYDSEGKI 358
            +VHRGA+F  +RTTSVRKLLPESWGFLCPV+TPDGEPCGLLNHMT +CR++S YDS G I
Sbjct: 374  AVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNI 433

Query: 359  KDPLKIRMSILSVLVAIGMTPLLPKLERAGPPEILHVLLDGCVVGSIASLQIEEAVAHIR 538
            +D  K+R SIL VL+ +GM P LPKL ++GPP +L VLLDG VVG I S +IE+ VAH+R
Sbjct: 434  RDFSKMRTSILRVLIGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLR 493

Query: 539  SLKLSSLSGVPEDLEVGYIPLSYGGAYPGLYLFTNPSRFIRPVRNLAHGNDGGNDIELIG 718
             LK+S+ S +P+DLEVGY+PLS GGAYPGLYLFT+P +F+RPVRN++  ++   +IELIG
Sbjct: 494  RLKVSAASVIPDDLEVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIG 553

Query: 719  PFEQAFMEIRCSXXXXXXXXXFFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQM 898
            PFEQ FMEIRC           FPATHEEIHPTG+LSVVANLTP+SDHNQSPRNMYQCQM
Sbjct: 554  PFEQVFMEIRCPDGGDGGRRNAFPATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQM 613

Query: 899  AKQTMGFSGQALQYRADLKTYHLQTPQSPIVRTTSYTKYCMDEFPTGTNAIVAVLAYTGY 1078
            AKQTMGFS QAL++RAD K YHLQTPQ+PIVRT +YTKY +DE+PTGTNAIVAVLAYTGY
Sbjct: 614  AKQTMGFSVQALKFRADQKLYHLQTPQTPIVRTNTYTKYSIDEYPTGTNAIVAVLAYTGY 673

Query: 1079 DMEDAMILNKSSVDRGLSRGHIYQTESIDLAKK-HETDRIQEIFARSNTDRNMMFSIDSD 1255
            DMEDAMILNKSSVDRG+  G IYQTE+IDL+   ++ DR Q++F R+   +++   IDSD
Sbjct: 674  DMEDAMILNKSSVDRGMCHGQIYQTETIDLSDDGNKVDRGQKLFRRNKDAKSLHSVIDSD 733

Query: 1256 GLPYVGQMVHPREPLYSTHNTLTSTTKPTFLKGSEDAIIDYVSVDGTGSKNYLQKVNIRT 1435
            GLPYVGQM+HP EP  S ++  T++ +    KGSE   +DYV+VD   SKN  QK NIR 
Sbjct: 734  GLPYVGQMIHPGEPYCSIYDKTTNSWRTNSRKGSESVFVDYVAVDMKNSKNLPQKANIRF 793

Query: 1436 RRTRDPIIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRP 1558
            R TR+PIIGDKFSSRHGQKGVCSQLWPD+DMPFS VTGMRP
Sbjct: 794  RHTRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRP 834