BLASTX nr result
ID: Zingiber24_contig00030988
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00030988
(258 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004973783.1| PREDICTED: RING-H2 finger protein ATL70-like... 108 6e-22
ref|NP_001062121.1| Os08g0492500 [Oryza sativa Japonica Group] g... 108 7e-22
ref|XP_002444825.1| hypothetical protein SORBIDRAFT_07g028710 [S... 105 5e-21
dbj|BAK03428.1| predicted protein [Hordeum vulgare subsp. vulgar... 105 6e-21
ref|XP_003578295.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 102 5e-20
ref|NP_001151741.1| RING-H2 finger protein [Zea mays] gi|1956494... 100 3e-19
gb|ACF86145.1| unknown [Zea mays] gi|219885585|gb|ACL53167.1| un... 100 3e-19
ref|NP_001063473.1| Os09g0478600 [Oryza sativa Japonica Group] g... 99 8e-19
gb|EAZ45123.1| hypothetical protein OsJ_29760 [Oryza sativa Japo... 97 2e-18
ref|XP_003572327.1| PREDICTED: RING finger protein 126-A-like [B... 97 2e-18
gb|EAZ09497.1| hypothetical protein OsI_31770 [Oryza sativa Indi... 97 2e-18
emb|CBI28474.3| unnamed protein product [Vitis vinifera] 93 4e-17
ref|XP_002264718.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 93 4e-17
emb|CAN82068.1| hypothetical protein VITISV_037474 [Vitis vinifera] 93 4e-17
ref|XP_002321207.1| hypothetical protein POPTR_0014s16830g [Popu... 89 5e-16
gb|EOX93567.1| RING/U-box superfamily protein, putative [Theobro... 88 1e-15
ref|XP_004251547.1| PREDICTED: RING-H2 finger protein ATL10-like... 88 1e-15
tpg|DAA61953.1| TPA: putative RING zinc finger domain superfamil... 87 3e-15
ref|NP_001150857.1| protein binding protein [Zea mays] gi|195642... 87 3e-15
gb|ACG26516.1| protein binding protein [Zea mays] 87 3e-15
>ref|XP_004973783.1| PREDICTED: RING-H2 finger protein ATL70-like [Setaria italica]
Length = 169
Score = 108 bits (271), Expect = 6e-22
Identities = 52/79 (65%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = -1
Query: 243 SLTDRFRSRCRPIRFXXXXXXXXXXXXAS-DCRVCLACFEPDSMVNTLPCGHFFHKACLE 67
SL DRFRSR RP RF A+ DCRVCLA FEP+S+VN LPCGH FH+ACLE
Sbjct: 73 SLADRFRSRFRPSRFGRRRGGVGGGAGAAADCRVCLARFEPESVVNRLPCGHLFHRACLE 132
Query: 66 TWLDYQHATCPLCRTYVLP 10
TWLDY HATCPLCR +LP
Sbjct: 133 TWLDYDHATCPLCRLRLLP 151
>ref|NP_001062121.1| Os08g0492500 [Oryza sativa Japonica Group]
gi|42408776|dbj|BAD10011.1| zinc finger protein
family-like [Oryza sativa Japonica Group]
gi|113624090|dbj|BAF24035.1| Os08g0492500 [Oryza sativa
Japonica Group] gi|125562007|gb|EAZ07455.1| hypothetical
protein OsI_29711 [Oryza sativa Indica Group]
gi|215694447|dbj|BAG89464.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 167
Score = 108 bits (270), Expect = 7e-22
Identities = 51/79 (64%), Positives = 56/79 (70%)
Frame = -1
Query: 243 SLTDRFRSRCRPIRFXXXXXXXXXXXXASDCRVCLACFEPDSMVNTLPCGHFFHKACLET 64
SL DRFRSR RP RF +DCRVCLA FEP+S+VN LPCGH FH+ACLE
Sbjct: 73 SLADRFRSRFRPARFGRRRGGGAGA---ADCRVCLARFEPESVVNRLPCGHLFHRACLEK 129
Query: 63 WLDYQHATCPLCRTYVLPA 7
WLDY HATCPLCR +LPA
Sbjct: 130 WLDYDHATCPLCRHRLLPA 148
>ref|XP_002444825.1| hypothetical protein SORBIDRAFT_07g028710 [Sorghum bicolor]
gi|241941175|gb|EES14320.1| hypothetical protein
SORBIDRAFT_07g028710 [Sorghum bicolor]
Length = 167
Score = 105 bits (263), Expect = 5e-21
Identities = 49/78 (62%), Positives = 54/78 (69%)
Frame = -1
Query: 243 SLTDRFRSRCRPIRFXXXXXXXXXXXXASDCRVCLACFEPDSMVNTLPCGHFFHKACLET 64
+L DRFRSR RP RF DCRVCL FEP+S+VN LPCGH FH+ACLET
Sbjct: 73 TLADRFRSRFRPSRFGRRRGCGGS----GDCRVCLVRFEPESVVNRLPCGHLFHRACLET 128
Query: 63 WLDYQHATCPLCRTYVLP 10
WLDY HATCPLCR +LP
Sbjct: 129 WLDYDHATCPLCRHRLLP 146
>dbj|BAK03428.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528913|dbj|BAJ97478.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326531940|dbj|BAK01346.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 163
Score = 105 bits (262), Expect = 6e-21
Identities = 49/79 (62%), Positives = 55/79 (69%)
Frame = -1
Query: 243 SLTDRFRSRCRPIRFXXXXXXXXXXXXASDCRVCLACFEPDSMVNTLPCGHFFHKACLET 64
SL +RFRSR RP RF DCRVCL FE D++VN LPCGH FH+ACLET
Sbjct: 68 SLAERFRSRFRPARFGRRRGAAAAP----DCRVCLVRFEADAVVNRLPCGHMFHRACLET 123
Query: 63 WLDYQHATCPLCRTYVLPA 7
WLDY HATCPLCR+ +LPA
Sbjct: 124 WLDYDHATCPLCRSRLLPA 142
>ref|XP_003578295.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like
[Brachypodium distachyon]
Length = 161
Score = 102 bits (254), Expect = 5e-20
Identities = 47/78 (60%), Positives = 54/78 (69%)
Frame = -1
Query: 243 SLTDRFRSRCRPIRFXXXXXXXXXXXXASDCRVCLACFEPDSMVNTLPCGHFFHKACLET 64
SL +RFRSR RP RF DCRVCL FE +++VN LPCGH FH+ACLET
Sbjct: 68 SLAERFRSRFRPARFGRRRGGAAAAAP--DCRVCLVRFEAEAVVNRLPCGHLFHRACLET 125
Query: 63 WLDYQHATCPLCRTYVLP 10
WLDY HATCPLCR+ +LP
Sbjct: 126 WLDYDHATCPLCRSRLLP 143
>ref|NP_001151741.1| RING-H2 finger protein [Zea mays] gi|195649445|gb|ACG44190.1|
RING-H2 finger protein [Zea mays]
Length = 145
Score = 99.8 bits (247), Expect = 3e-19
Identities = 46/78 (58%), Positives = 52/78 (66%)
Frame = -1
Query: 243 SLTDRFRSRCRPIRFXXXXXXXXXXXXASDCRVCLACFEPDSMVNTLPCGHFFHKACLET 64
SL DRFRSR RP R+ DCRVCL FE +S+V LPCGH FH+ACLET
Sbjct: 64 SLADRFRSRFRPSRYGRRRG--------GDCRVCLVRFETESVVQRLPCGHLFHRACLET 115
Query: 63 WLDYQHATCPLCRTYVLP 10
W+DY HATCPLCR +LP
Sbjct: 116 WIDYDHATCPLCRHRLLP 133
>gb|ACF86145.1| unknown [Zea mays] gi|219885585|gb|ACL53167.1| unknown [Zea mays]
gi|414869244|tpg|DAA47801.1| TPA: putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 146
Score = 99.8 bits (247), Expect = 3e-19
Identities = 46/78 (58%), Positives = 52/78 (66%)
Frame = -1
Query: 243 SLTDRFRSRCRPIRFXXXXXXXXXXXXASDCRVCLACFEPDSMVNTLPCGHFFHKACLET 64
SL DRFRSR RP R+ DCRVCL FE +S+V LPCGH FH+ACLET
Sbjct: 65 SLADRFRSRFRPSRYGRRRG--------GDCRVCLVRFETESVVQRLPCGHLFHRACLET 116
Query: 63 WLDYQHATCPLCRTYVLP 10
W+DY HATCPLCR +LP
Sbjct: 117 WIDYDHATCPLCRHRLLP 134
>ref|NP_001063473.1| Os09g0478600 [Oryza sativa Japonica Group]
gi|113631706|dbj|BAF25387.1| Os09g0478600, partial
[Oryza sativa Japonica Group]
Length = 110
Score = 98.6 bits (244), Expect = 8e-19
Identities = 45/77 (58%), Positives = 53/77 (68%)
Frame = -1
Query: 243 SLTDRFRSRCRPIRFXXXXXXXXXXXXASDCRVCLACFEPDSMVNTLPCGHFFHKACLET 64
SL D FR+R RP RF +DCRVCL FE +++VN LPCGH FH+ACLET
Sbjct: 21 SLADTFRARFRPARFGHRRCGGGAT---ADCRVCLVRFEAEAVVNRLPCGHIFHRACLET 77
Query: 63 WLDYQHATCPLCRTYVL 13
WLDY HATCPLCR+ +L
Sbjct: 78 WLDYDHATCPLCRSRLL 94
>gb|EAZ45123.1| hypothetical protein OsJ_29760 [Oryza sativa Japonica Group]
Length = 153
Score = 97.4 bits (241), Expect = 2e-18
Identities = 44/77 (57%), Positives = 53/77 (68%)
Frame = -1
Query: 243 SLTDRFRSRCRPIRFXXXXXXXXXXXXASDCRVCLACFEPDSMVNTLPCGHFFHKACLET 64
SL D FR+R RP RF +DCRVCL FE +++VN +PCGH FH+ACLET
Sbjct: 76 SLADTFRARFRPARFGHRRCGGGAT---ADCRVCLVRFEAEAVVNRVPCGHIFHRACLET 132
Query: 63 WLDYQHATCPLCRTYVL 13
WLDY HATCPLCR+ +L
Sbjct: 133 WLDYDHATCPLCRSRLL 149
>ref|XP_003572327.1| PREDICTED: RING finger protein 126-A-like [Brachypodium distachyon]
Length = 158
Score = 97.1 bits (240), Expect = 2e-18
Identities = 46/79 (58%), Positives = 52/79 (65%)
Frame = -1
Query: 243 SLTDRFRSRCRPIRFXXXXXXXXXXXXASDCRVCLACFEPDSMVNTLPCGHFFHKACLET 64
SL DRFRS RP F +DCRVCLA FEP+S+VN LPCGH FH+ CLE
Sbjct: 69 SLADRFRSSFRPALFGRRAHGAAA----ADCRVCLASFEPESVVNRLPCGHLFHRDCLEK 124
Query: 63 WLDYQHATCPLCRTYVLPA 7
WL Y +ATCPLCR +LPA
Sbjct: 125 WLGYDNATCPLCRLRLLPA 143
>gb|EAZ09497.1| hypothetical protein OsI_31770 [Oryza sativa Indica Group]
Length = 116
Score = 97.1 bits (240), Expect = 2e-18
Identities = 44/76 (57%), Positives = 52/76 (68%)
Frame = -1
Query: 240 LTDRFRSRCRPIRFXXXXXXXXXXXXASDCRVCLACFEPDSMVNTLPCGHFFHKACLETW 61
L D FR+R RP RF +DCRVCL FE +++VN LPCGH FH+ACLETW
Sbjct: 28 LADTFRARFRPARFGRRRCGGGAT---ADCRVCLVRFEAEAVVNRLPCGHIFHRACLETW 84
Query: 60 LDYQHATCPLCRTYVL 13
LDY HATCPLCR+ +L
Sbjct: 85 LDYDHATCPLCRSRLL 100
>emb|CBI28474.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 92.8 bits (229), Expect = 4e-17
Identities = 44/78 (56%), Positives = 49/78 (62%)
Frame = -1
Query: 234 DRFRSRCRPIRFXXXXXXXXXXXXASDCRVCLACFEPDSMVNTLPCGHFFHKACLETWLD 55
+ FRSR IRF DC VCL FEPDS +N LPCGHFFHK CLE WLD
Sbjct: 74 EEFRSRNPAIRFDTVCSCKRPEH---DCAVCLTRFEPDSEINHLPCGHFFHKVCLEKWLD 130
Query: 54 YQHATCPLCRTYVLPAEE 1
Y + TCPLCRT ++P EE
Sbjct: 131 YWNITCPLCRTPLMPEEE 148
>ref|XP_002264718.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
Length = 151
Score = 92.8 bits (229), Expect = 4e-17
Identities = 44/78 (56%), Positives = 49/78 (62%)
Frame = -1
Query: 234 DRFRSRCRPIRFXXXXXXXXXXXXASDCRVCLACFEPDSMVNTLPCGHFFHKACLETWLD 55
+ FRSR IRF DC VCL FEPDS +N LPCGHFFHK CLE WLD
Sbjct: 72 EEFRSRNPAIRFDTVCSCKRPEH---DCAVCLTRFEPDSEINHLPCGHFFHKVCLEKWLD 128
Query: 54 YQHATCPLCRTYVLPAEE 1
Y + TCPLCRT ++P EE
Sbjct: 129 YWNITCPLCRTPLMPEEE 146
>emb|CAN82068.1| hypothetical protein VITISV_037474 [Vitis vinifera]
Length = 223
Score = 92.8 bits (229), Expect = 4e-17
Identities = 44/78 (56%), Positives = 49/78 (62%)
Frame = -1
Query: 234 DRFRSRCRPIRFXXXXXXXXXXXXASDCRVCLACFEPDSMVNTLPCGHFFHKACLETWLD 55
+ FRSR IRF DC VCL FEPDS +N LPCGHFFHK CLE WLD
Sbjct: 144 EEFRSRNPAIRFDTVCSCKRPEH---DCAVCLTRFEPDSEINHLPCGHFFHKVCLEKWLD 200
Query: 54 YQHATCPLCRTYVLPAEE 1
Y + TCPLCRT ++P EE
Sbjct: 201 YWNITCPLCRTPLMPEEE 218
>ref|XP_002321207.1| hypothetical protein POPTR_0014s16830g [Populus trichocarpa]
gi|566204675|ref|XP_006375582.1| hypothetical protein
POPTR_0014s16830g [Populus trichocarpa]
gi|566204677|ref|XP_006375583.1| hypothetical protein
POPTR_0014s16830g [Populus trichocarpa]
gi|566204679|ref|XP_006375584.1| putative RING zinc
finger family protein [Populus trichocarpa]
gi|566204682|ref|XP_006375585.1| hypothetical protein
POPTR_0014s16830g [Populus trichocarpa]
gi|222861980|gb|EEE99522.1| hypothetical protein
POPTR_0014s16830g [Populus trichocarpa]
gi|550324363|gb|ERP53379.1| hypothetical protein
POPTR_0014s16830g [Populus trichocarpa]
gi|550324364|gb|ERP53380.1| hypothetical protein
POPTR_0014s16830g [Populus trichocarpa]
gi|550324365|gb|ERP53381.1| putative RING zinc finger
family protein [Populus trichocarpa]
gi|550324366|gb|ERP53382.1| hypothetical protein
POPTR_0014s16830g [Populus trichocarpa]
Length = 153
Score = 89.4 bits (220), Expect = 5e-16
Identities = 42/83 (50%), Positives = 50/83 (60%)
Frame = -1
Query: 249 PHSLTDRFRSRCRPIRFXXXXXXXXXXXXASDCRVCLACFEPDSMVNTLPCGHFFHKACL 70
P + + FRSR IRF DC VCL FEP+S +N+L CGH FHK CL
Sbjct: 69 PENYIEEFRSRMPSIRFNTVCSCEQPEH---DCSVCLTQFEPESEINSLSCGHIFHKMCL 125
Query: 69 ETWLDYQHATCPLCRTYVLPAEE 1
E WLDY + TCPLCRT +LP E+
Sbjct: 126 EKWLDYWNITCPLCRTPLLPEED 148
>gb|EOX93567.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 151
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/81 (53%), Positives = 47/81 (58%)
Frame = -1
Query: 243 SLTDRFRSRCRPIRFXXXXXXXXXXXXASDCRVCLACFEPDSMVNTLPCGHFFHKACLET 64
S D FRSR IRF DC VCL FEP+S +N L CGH FHK CLE
Sbjct: 69 SYIDEFRSRTPAIRFDAVCSCKRPEH---DCSVCLTQFEPESEINRLSCGHLFHKVCLEK 125
Query: 63 WLDYQHATCPLCRTYVLPAEE 1
WL Y + TCPLCRT +LP EE
Sbjct: 126 WLKYWNVTCPLCRTPLLPEEE 146
>ref|XP_004251547.1| PREDICTED: RING-H2 finger protein ATL10-like [Solanum lycopersicum]
Length = 156
Score = 87.8 bits (216), Expect = 1e-15
Identities = 40/83 (48%), Positives = 48/83 (57%)
Frame = -1
Query: 249 PHSLTDRFRSRCRPIRFXXXXXXXXXXXXASDCRVCLACFEPDSMVNTLPCGHFFHKACL 70
P S + FRSR R+ +C VCL FEPD+ VN+L CGH FHK CL
Sbjct: 66 PESYMEEFRSRTPAFRYDSLRISNHPE---QECSVCLTKFEPDAGVNSLSCGHVFHKLCL 122
Query: 69 ETWLDYQHATCPLCRTYVLPAEE 1
E WL Y H TCPLCR Y++P +E
Sbjct: 123 EKWLRYWHVTCPLCRNYLMPQQE 145
>tpg|DAA61953.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 162
Score = 86.7 bits (213), Expect = 3e-15
Identities = 37/53 (69%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
Frame = -1
Query: 156 DCRVCLACFEPDSMVNTLPCGHFFHKACLETWLDYQHATCPLCRTYV-LPAEE 1
DC VCLA FE +++VN LPCGH FH+ACLETWL Y+ ATCPLCR +V LPA+E
Sbjct: 100 DCSVCLAGFEAEAVVNRLPCGHLFHRACLETWLRYERATCPLCRAHVPLPADE 152
>ref|NP_001150857.1| protein binding protein [Zea mays] gi|195642422|gb|ACG40679.1|
protein binding protein [Zea mays]
Length = 165
Score = 86.7 bits (213), Expect = 3e-15
Identities = 37/53 (69%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
Frame = -1
Query: 156 DCRVCLACFEPDSMVNTLPCGHFFHKACLETWLDYQHATCPLCRTYV-LPAEE 1
DC VCLA FE +++VN LPCGH FH+ACLETWL Y+ ATCPLCR +V LPA+E
Sbjct: 103 DCSVCLAGFEAEAVVNRLPCGHLFHRACLETWLRYERATCPLCRAHVPLPADE 155
>gb|ACG26516.1| protein binding protein [Zea mays]
Length = 157
Score = 86.7 bits (213), Expect = 3e-15
Identities = 37/53 (69%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
Frame = -1
Query: 156 DCRVCLACFEPDSMVNTLPCGHFFHKACLETWLDYQHATCPLCRTYV-LPAEE 1
DC VCLA FE +++VN LPCGH FH+ACLETWL Y+ ATCPLCR +V LPA+E
Sbjct: 95 DCSVCLAGFEAEAVVNRLPCGHLFHRACLETWLRYERATCPLCRAHVPLPADE 147