BLASTX nr result
ID: Zingiber24_contig00030445
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00030445
(474 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004958058.1| PREDICTED: cytochrome c6, chloroplastic-like... 129 4e-28
ref|XP_002463042.1| hypothetical protein SORBIDRAFT_02g036670 [S... 126 3e-27
ref|NP_001168633.1| cytochrome c6 [Zea mays] gi|223949699|gb|ACN... 126 3e-27
gb|ACG37082.1| cytochrome c6 [Zea mays] 126 3e-27
gb|EAZ04378.1| hypothetical protein OsI_26520 [Oryza sativa Indi... 125 6e-27
ref|XP_006658708.1| PREDICTED: cytochrome c6, chloroplastic-like... 124 2e-26
ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isof... 120 1e-25
ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isof... 120 1e-25
emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera] 120 1e-25
gb|EMT19430.1| Cytochrome c6, chloroplastic [Aegilops tauschii] 119 3e-25
gb|EMJ13429.1| hypothetical protein PRUPE_ppa013384mg [Prunus pe... 119 3e-25
ref|XP_004293752.1| PREDICTED: cytochrome c6, chloroplastic-like... 118 7e-25
ref|XP_006398150.1| hypothetical protein EUTSA_v10001050mg [Eutr... 117 1e-24
ref|XP_003560070.1| PREDICTED: cytochrome c6, chloroplastic-like... 117 2e-24
gb|EXC24764.1| Cytochrome c6 [Morus notabilis] 116 3e-24
ref|NP_568640.1| cytochrome c6 [Arabidopsis thaliana] gi|2780545... 116 3e-24
ref|XP_006487479.1| PREDICTED: cytochrome c6, chloroplastic-like... 116 3e-24
ref|XP_002865286.1| electron transporter protein [Arabidopsis ly... 116 3e-24
ref|XP_006362590.1| PREDICTED: cytochrome c6, chloroplastic-like... 116 3e-24
ref|XP_006468460.1| PREDICTED: cytochrome c6, chloroplastic-like... 115 5e-24
>ref|XP_004958058.1| PREDICTED: cytochrome c6, chloroplastic-like [Setaria italica]
Length = 186
Score = 129 bits (324), Expect = 4e-28
Identities = 59/74 (79%), Positives = 66/74 (89%)
Frame = +3
Query: 252 ASAPVAYSLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNITY 431
A+ P A++ +S GAALF+KACIGCHDMGGNILQPGATLFLKDL+RNG TEE LYNITY
Sbjct: 74 ATIPPAFAQPVSEGAALFRKACIGCHDMGGNILQPGATLFLKDLERNGVVTEEELYNITY 133
Query: 432 YGKGRMPGFGEQCT 473
YGKGRMPGFGE+CT
Sbjct: 134 YGKGRMPGFGEKCT 147
>ref|XP_002463042.1| hypothetical protein SORBIDRAFT_02g036670 [Sorghum bicolor]
gi|241926419|gb|EER99563.1| hypothetical protein
SORBIDRAFT_02g036670 [Sorghum bicolor]
Length = 190
Score = 126 bits (317), Expect = 3e-27
Identities = 58/74 (78%), Positives = 65/74 (87%)
Frame = +3
Query: 252 ASAPVAYSLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNITY 431
A+ A++ +S GAALF+KACIGCHDMGGNILQPGATLFLKDL+RNG TEE LYNITY
Sbjct: 78 AAISPAFAQPVSEGAALFRKACIGCHDMGGNILQPGATLFLKDLERNGVATEEELYNITY 137
Query: 432 YGKGRMPGFGEQCT 473
YGKGRMPGFGE+CT
Sbjct: 138 YGKGRMPGFGEKCT 151
>ref|NP_001168633.1| cytochrome c6 [Zea mays] gi|223949699|gb|ACN28933.1| unknown [Zea
mays] gi|414887165|tpg|DAA63179.1| TPA: cytochrome c6
[Zea mays]
Length = 185
Score = 126 bits (317), Expect = 3e-27
Identities = 58/74 (78%), Positives = 65/74 (87%)
Frame = +3
Query: 252 ASAPVAYSLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNITY 431
A+ A++ +S GAALF+KACIGCHDMGGNILQPGATLFLKDL+RNG TEE LYNITY
Sbjct: 73 AAISPAFAQPVSEGAALFRKACIGCHDMGGNILQPGATLFLKDLERNGVATEEELYNITY 132
Query: 432 YGKGRMPGFGEQCT 473
YGKGRMPGFGE+CT
Sbjct: 133 YGKGRMPGFGEKCT 146
>gb|ACG37082.1| cytochrome c6 [Zea mays]
Length = 185
Score = 126 bits (317), Expect = 3e-27
Identities = 58/74 (78%), Positives = 65/74 (87%)
Frame = +3
Query: 252 ASAPVAYSLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNITY 431
A+ A++ +S GAALF+KACIGCHDMGGNILQPGATLFLKDL+RNG TEE LYNITY
Sbjct: 73 AAISPAFAQPVSEGAALFRKACIGCHDMGGNILQPGATLFLKDLERNGVATEEELYNITY 132
Query: 432 YGKGRMPGFGEQCT 473
YGKGRMPGFGE+CT
Sbjct: 133 YGKGRMPGFGEKCT 146
>gb|EAZ04378.1| hypothetical protein OsI_26520 [Oryza sativa Indica Group]
gi|125600761|gb|EAZ40337.1| hypothetical protein
OsJ_24784 [Oryza sativa Japonica Group]
Length = 188
Score = 125 bits (314), Expect = 6e-27
Identities = 58/75 (77%), Positives = 66/75 (88%)
Frame = +3
Query: 249 LASAPVAYSLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNIT 428
LAS P A++ S GAALF+KACIGCHDMGGNILQPGATL++KDL+RNG TE+ LYNIT
Sbjct: 77 LASTPSAFA--QSEGAALFRKACIGCHDMGGNILQPGATLYMKDLERNGVATEDELYNIT 134
Query: 429 YYGKGRMPGFGEQCT 473
YYGKGRMPGFGE+CT
Sbjct: 135 YYGKGRMPGFGEKCT 149
>ref|XP_006658708.1| PREDICTED: cytochrome c6, chloroplastic-like [Oryza brachyantha]
Length = 138
Score = 124 bits (310), Expect = 2e-26
Identities = 57/74 (77%), Positives = 65/74 (87%)
Frame = +3
Query: 252 ASAPVAYSLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNITY 431
A+ P A++ S GAALF+KACIGCHDMGGNILQPGATLF+KDL+RNG TE+ LYNITY
Sbjct: 28 AATPPAFA--QSEGAALFRKACIGCHDMGGNILQPGATLFMKDLERNGVATEDELYNITY 85
Query: 432 YGKGRMPGFGEQCT 473
YGKGRMPGFGE+CT
Sbjct: 86 YGKGRMPGFGEKCT 99
>ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isoform 1 [Vitis vinifera]
Length = 167
Score = 120 bits (302), Expect = 1e-25
Identities = 53/76 (69%), Positives = 60/76 (78%)
Frame = +3
Query: 246 CLASAPVAYSLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNI 425
C +A + + GAALF +ACIGCHD GGNI+QPGATLFLKDLQRNG DTEE +Y +
Sbjct: 53 CNTPVSLAQTTDIQRGAALFGRACIGCHDAGGNIIQPGATLFLKDLQRNGVDTEEEIYRV 112
Query: 426 TYYGKGRMPGFGEQCT 473
TYYGKGRMPGFGE CT
Sbjct: 113 TYYGKGRMPGFGENCT 128
>ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isoform 2 [Vitis vinifera]
gi|297737964|emb|CBI27165.3| unnamed protein product
[Vitis vinifera]
Length = 173
Score = 120 bits (302), Expect = 1e-25
Identities = 53/76 (69%), Positives = 60/76 (78%)
Frame = +3
Query: 246 CLASAPVAYSLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNI 425
C +A + + GAALF +ACIGCHD GGNI+QPGATLFLKDLQRNG DTEE +Y +
Sbjct: 59 CNTPVSLAQTTDIQRGAALFGRACIGCHDAGGNIIQPGATLFLKDLQRNGVDTEEEIYRV 118
Query: 426 TYYGKGRMPGFGEQCT 473
TYYGKGRMPGFGE CT
Sbjct: 119 TYYGKGRMPGFGENCT 134
>emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera]
Length = 125
Score = 120 bits (302), Expect = 1e-25
Identities = 53/76 (69%), Positives = 60/76 (78%)
Frame = +3
Query: 246 CLASAPVAYSLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNI 425
C +A + + GAALF +ACIGCHD GGNI+QPGATLFLKDLQRNG DTEE +Y +
Sbjct: 11 CNTPVSLAQTTDIQRGAALFGRACIGCHDAGGNIIQPGATLFLKDLQRNGVDTEEEIYRV 70
Query: 426 TYYGKGRMPGFGEQCT 473
TYYGKGRMPGFGE CT
Sbjct: 71 TYYGKGRMPGFGENCT 86
>gb|EMT19430.1| Cytochrome c6, chloroplastic [Aegilops tauschii]
Length = 176
Score = 119 bits (299), Expect = 3e-25
Identities = 55/74 (74%), Positives = 63/74 (85%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 SAPVAY-SLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNITY 431
S PV + + + S GAALF+KACIGCHD GGNILQPGATL +KDL+RNG TEE +YNITY
Sbjct: 64 SCPVLHPAFAQSQGAALFRKACIGCHDTGGNILQPGATLSMKDLERNGVATEEEIYNITY 123
Query: 432 YGKGRMPGFGEQCT 473
YGKGRMPG+GEQCT
Sbjct: 124 YGKGRMPGYGEQCT 137
>gb|EMJ13429.1| hypothetical protein PRUPE_ppa013384mg [Prunus persica]
Length = 126
Score = 119 bits (299), Expect = 3e-25
Identities = 51/76 (67%), Positives = 61/76 (80%)
Frame = +3
Query: 246 CLASAPVAYSLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNI 425
C+ A +L + GAALF+K CIGCHD GGNI+QPGATLF +DLQRNG DTEE +Y +
Sbjct: 12 CITPVSDAQTLDVQKGAALFRKTCIGCHDAGGNIIQPGATLFTRDLQRNGVDTEEEIYRV 71
Query: 426 TYYGKGRMPGFGEQCT 473
TY+GKGRMPGFGE+CT
Sbjct: 72 TYFGKGRMPGFGEKCT 87
>ref|XP_004293752.1| PREDICTED: cytochrome c6, chloroplastic-like [Fragaria vesca subsp.
vesca]
Length = 170
Score = 118 bits (296), Expect = 7e-25
Identities = 50/76 (65%), Positives = 60/76 (78%)
Frame = +3
Query: 246 CLASAPVAYSLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNI 425
C+ A ++ + GAALF+ CIGCHDMGGNI+QPGATLF KDLQRNG DTEE +Y +
Sbjct: 57 CITPVSHAQTIDVQKGAALFRTTCIGCHDMGGNIIQPGATLFTKDLQRNGVDTEEEIYRV 116
Query: 426 TYYGKGRMPGFGEQCT 473
TY+GKGRMPGFG+ CT
Sbjct: 117 TYFGKGRMPGFGQNCT 132
>ref|XP_006398150.1| hypothetical protein EUTSA_v10001050mg [Eutrema salsugineum]
gi|557099239|gb|ESQ39603.1| hypothetical protein
EUTSA_v10001050mg [Eutrema salsugineum]
Length = 174
Score = 117 bits (294), Expect = 1e-24
Identities = 53/82 (64%), Positives = 62/82 (75%), Gaps = 7/82 (8%)
Frame = +3
Query: 249 LASAPVAY-------SLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTE 407
LA +P+ Y +L + GA LF +ACIGCHD GGNI+QPGATLF DLQRNG DTE
Sbjct: 56 LAVSPICYPPESLGQTLDIQRGATLFNRACIGCHDTGGNIIQPGATLFTSDLQRNGVDTE 115
Query: 408 ESLYNITYYGKGRMPGFGEQCT 473
E +Y +TYYGKGRMPGFGE+CT
Sbjct: 116 EEIYRVTYYGKGRMPGFGEKCT 137
>ref|XP_003560070.1| PREDICTED: cytochrome c6, chloroplastic-like [Brachypodium
distachyon]
Length = 178
Score = 117 bits (293), Expect = 2e-24
Identities = 51/61 (83%), Positives = 57/61 (93%)
Frame = +3
Query: 291 GAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNITYYGKGRMPGFGEQC 470
GAALF+KACIGCHD GGNILQPGATLF+KDL+RNG TEE +YNITYYGKGRMPG+GE+C
Sbjct: 79 GAALFRKACIGCHDTGGNILQPGATLFMKDLERNGVATEEEIYNITYYGKGRMPGYGEKC 138
Query: 471 T 473
T
Sbjct: 139 T 139
>gb|EXC24764.1| Cytochrome c6 [Morus notabilis]
Length = 198
Score = 116 bits (291), Expect = 3e-24
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = +3
Query: 273 SLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNITYYGKGRMP 452
++ + GA+LF+KACIGCHD GGNI+QPGATLFLKDLQRNG D+EE +Y +TY+GKGRMP
Sbjct: 93 TIDVQRGASLFRKACIGCHDGGGNIIQPGATLFLKDLQRNGIDSEEEIYRVTYFGKGRMP 152
Query: 453 GFGEQCT 473
GFGE CT
Sbjct: 153 GFGENCT 159
>ref|NP_568640.1| cytochrome c6 [Arabidopsis thaliana]
gi|27805454|sp|Q93VA3.1|CYC6_ARATH RecName:
Full=Cytochrome c6, chloroplastic; AltName:
Full=Cytochrome c-552; Short=Atc6; AltName:
Full=Cytochrome c-553; AltName: Full=Cytochrome c553;
AltName: Full=Soluble cytochrome f; Flags: Precursor
gi|13926305|gb|AAK49619.1|AF372903_1 AT5g45040/K21C13_23
[Arabidopsis thaliana] gi|16323250|gb|AAL15359.1|
AT5g45040/K21C13_23 [Arabidopsis thaliana]
gi|19571824|emb|CAD27418.1| c6 type cytochrome
[Arabidopsis thaliana] gi|332007810|gb|AED95193.1|
cytochrome c6 [Arabidopsis thaliana]
Length = 175
Score = 116 bits (291), Expect = 3e-24
Identities = 49/76 (64%), Positives = 59/76 (77%)
Frame = +3
Query: 246 CLASAPVAYSLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNI 425
C + +L + GA LF +ACIGCHD GGNI+QPGATLF KDL+RNG DTEE +Y +
Sbjct: 63 CFPPESLGQTLDIQRGATLFNRACIGCHDTGGNIIQPGATLFTKDLERNGVDTEEEIYRV 122
Query: 426 TYYGKGRMPGFGEQCT 473
TY+GKGRMPGFGE+CT
Sbjct: 123 TYFGKGRMPGFGEKCT 138
>ref|XP_006487479.1| PREDICTED: cytochrome c6, chloroplastic-like [Citrus sinensis]
gi|568868385|ref|XP_006487480.1| PREDICTED: cytochrome
c6, chloroplastic-like [Citrus sinensis]
Length = 172
Score = 116 bits (291), Expect = 3e-24
Identities = 48/74 (64%), Positives = 64/74 (86%)
Frame = +3
Query: 252 ASAPVAYSLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNITY 431
A+ +A ++ + G +LF++ACIGCHD GGN++QPGATLFLKDLQRNG DTE+ +Y++TY
Sbjct: 60 AAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTY 119
Query: 432 YGKGRMPGFGEQCT 473
+GKGRMPGFGE+CT
Sbjct: 120 FGKGRMPGFGEKCT 133
>ref|XP_002865286.1| electron transporter protein [Arabidopsis lyrata subsp. lyrata]
gi|297311121|gb|EFH41545.1| electron transporter protein
[Arabidopsis lyrata subsp. lyrata]
Length = 176
Score = 116 bits (291), Expect = 3e-24
Identities = 49/76 (64%), Positives = 59/76 (77%)
Frame = +3
Query: 246 CLASAPVAYSLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNI 425
C + +L + GA LF +ACIGCHD GGNI+QPGATLF KDL+RNG DTEE +Y +
Sbjct: 64 CFPPESLGQTLDIQRGATLFNRACIGCHDTGGNIIQPGATLFTKDLERNGVDTEEEIYRV 123
Query: 426 TYYGKGRMPGFGEQCT 473
TY+GKGRMPGFGE+CT
Sbjct: 124 TYFGKGRMPGFGEKCT 139
>ref|XP_006362590.1| PREDICTED: cytochrome c6, chloroplastic-like [Solanum tuberosum]
Length = 181
Score = 116 bits (290), Expect = 3e-24
Identities = 51/70 (72%), Positives = 58/70 (82%)
Frame = +3
Query: 264 VAYSLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNITYYGKG 443
V ++ + GAALF +ACIGCH GGNI+QPGATLFLKDLQRNG DTEE +Y ITYYGKG
Sbjct: 71 VGQTIDVQKGAALFNRACIGCHYEGGNIIQPGATLFLKDLQRNGVDTEEEIYRITYYGKG 130
Query: 444 RMPGFGEQCT 473
RMPGFG+ CT
Sbjct: 131 RMPGFGQNCT 140
>ref|XP_006468460.1| PREDICTED: cytochrome c6, chloroplastic-like isoform X2 [Citrus
sinensis]
Length = 147
Score = 115 bits (289), Expect = 5e-24
Identities = 48/76 (63%), Positives = 63/76 (82%)
Frame = +3
Query: 246 CLASAPVAYSLSMSNGAALFQKACIGCHDMGGNILQPGATLFLKDLQRNGFDTEESLYNI 425
C +A ++ + G +LF++ACIGCHD GGN++QPGATLFLKDLQRNG DTE+ +Y++
Sbjct: 33 CHDPVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHV 92
Query: 426 TYYGKGRMPGFGEQCT 473
TY+GKGRMPGFGE+CT
Sbjct: 93 TYFGKGRMPGFGEKCT 108