BLASTX nr result
ID: Zingiber24_contig00030436
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00030436
(224 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006663263.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 109 3e-22
ref|NP_001065911.1| Os11g0183700 [Oryza sativa Japonica Group] g... 105 6e-21
gb|EEE51768.1| hypothetical protein OsJ_33208 [Oryza sativa Japo... 105 6e-21
gb|EEC67805.1| hypothetical protein OsI_35371 [Oryza sativa Indi... 105 6e-21
gb|AFW65453.1| hypothetical protein ZEAMMB73_247521 [Zea mays] 101 9e-20
gb|AFW65452.1| hypothetical protein ZEAMMB73_247521 [Zea mays] 101 9e-20
gb|AFW65451.1| hypothetical protein ZEAMMB73_247521 [Zea mays] 101 9e-20
gb|AFW65450.1| hypothetical protein ZEAMMB73_247521 [Zea mays] 101 9e-20
ref|NP_001146162.1| uncharacterized protein LOC100279731 [Zea ma... 101 9e-20
ref|XP_003578845.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 100 2e-19
ref|XP_004978879.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 100 3e-19
ref|XP_004978878.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 100 3e-19
gb|EMS49851.1| hypothetical protein TRIUR3_16622 [Triticum urartu] 100 3e-19
ref|XP_002284548.2| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 99 5e-19
emb|CBI18988.3| unnamed protein product [Vitis vinifera] 99 5e-19
emb|CAN83645.1| hypothetical protein VITISV_016194 [Vitis vinifera] 99 5e-19
ref|NP_173589.1| SWI/SNF complex subunit SWI3C [Arabidopsis thal... 99 8e-19
dbj|BAJ93481.1| predicted protein [Hordeum vulgare subsp. vulgare] 99 8e-19
dbj|BAF93190.1| putative SWIRM domain containing protein [Hordeu... 99 8e-19
ref|XP_006416274.1| hypothetical protein EUTSA_v10006819mg [Eutr... 98 1e-18
>ref|XP_006663263.1| PREDICTED: SWI/SNF complex subunit SWI3C-like [Oryza brachyantha]
Length = 789
Score = 109 bits (273), Expect = 3e-22
Identities = 53/74 (71%), Positives = 67/74 (90%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EEREIQRL AT+INHQLKRLELKLKQFAE+ETLLLKECEQ ER+RQR++++R+R+MSTR
Sbjct: 612 EEREIQRLTATVINHQLKRLELKLKQFAEVETLLLKECEQVERIRQRIASDRVRIMSTRL 671
Query: 183 GASSNNVPSAGGAA 224
G+ N++P GG++
Sbjct: 672 GSPGNSLP--GGSS 683
>ref|NP_001065911.1| Os11g0183700 [Oryza sativa Japonica Group]
gi|62732908|gb|AAX95027.1| hypothetical protein
LOC_Os11g08080 [Oryza sativa Japonica Group]
gi|77549015|gb|ABA91812.1| SWIRM domain containing
protein, expressed [Oryza sativa Japonica Group]
gi|113644615|dbj|BAF27756.1| Os11g0183700 [Oryza sativa
Japonica Group] gi|215695000|dbj|BAG90191.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 784
Score = 105 bits (262), Expect = 6e-21
Identities = 49/68 (72%), Positives = 62/68 (91%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EEREIQRL AT+INHQLKRLELKLKQFAE+ETLLLKECEQ ER+RQR++++R+R++STR
Sbjct: 608 EEREIQRLTATVINHQLKRLELKLKQFAEVETLLLKECEQVERIRQRIASDRVRIVSTRL 667
Query: 183 GASSNNVP 206
+ N++P
Sbjct: 668 ASPGNSLP 675
>gb|EEE51768.1| hypothetical protein OsJ_33208 [Oryza sativa Japonica Group]
Length = 784
Score = 105 bits (262), Expect = 6e-21
Identities = 49/68 (72%), Positives = 62/68 (91%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EEREIQRL AT+INHQLKRLELKLKQFAE+ETLLLKECEQ ER+RQR++++R+R++STR
Sbjct: 608 EEREIQRLTATVINHQLKRLELKLKQFAEVETLLLKECEQVERIRQRIASDRVRIVSTRL 667
Query: 183 GASSNNVP 206
+ N++P
Sbjct: 668 ASPGNSLP 675
>gb|EEC67805.1| hypothetical protein OsI_35371 [Oryza sativa Indica Group]
Length = 785
Score = 105 bits (262), Expect = 6e-21
Identities = 49/68 (72%), Positives = 62/68 (91%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EEREIQRL AT+INHQLKRLELKLKQFAE+ETLLLKECEQ ER+RQR++++R+R++STR
Sbjct: 607 EEREIQRLTATVINHQLKRLELKLKQFAEVETLLLKECEQVERIRQRIASDRVRIVSTRL 666
Query: 183 GASSNNVP 206
+ N++P
Sbjct: 667 ASPGNSLP 674
>gb|AFW65453.1| hypothetical protein ZEAMMB73_247521 [Zea mays]
Length = 777
Score = 101 bits (252), Expect = 9e-20
Identities = 49/68 (72%), Positives = 57/68 (83%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EERE+QRL AT+INHQLKRLELKLKQFAE+ETLLLKECEQ ERVR R+S ER+RM S
Sbjct: 604 EEREVQRLTATVINHQLKRLELKLKQFAEVETLLLKECEQVERVRHRISAERVRMRSALL 663
Query: 183 GASSNNVP 206
G + + +P
Sbjct: 664 GPTGSGLP 671
>gb|AFW65452.1| hypothetical protein ZEAMMB73_247521 [Zea mays]
Length = 784
Score = 101 bits (252), Expect = 9e-20
Identities = 49/68 (72%), Positives = 57/68 (83%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EERE+QRL AT+INHQLKRLELKLKQFAE+ETLLLKECEQ ERVR R+S ER+RM S
Sbjct: 611 EEREVQRLTATVINHQLKRLELKLKQFAEVETLLLKECEQVERVRHRISAERVRMRSALL 670
Query: 183 GASSNNVP 206
G + + +P
Sbjct: 671 GPTGSGLP 678
>gb|AFW65451.1| hypothetical protein ZEAMMB73_247521 [Zea mays]
Length = 781
Score = 101 bits (252), Expect = 9e-20
Identities = 49/68 (72%), Positives = 57/68 (83%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EERE+QRL AT+INHQLKRLELKLKQFAE+ETLLLKECEQ ERVR R+S ER+RM S
Sbjct: 608 EEREVQRLTATVINHQLKRLELKLKQFAEVETLLLKECEQVERVRHRISAERVRMRSALL 667
Query: 183 GASSNNVP 206
G + + +P
Sbjct: 668 GPTGSGLP 675
>gb|AFW65450.1| hypothetical protein ZEAMMB73_247521 [Zea mays]
Length = 613
Score = 101 bits (252), Expect = 9e-20
Identities = 49/68 (72%), Positives = 57/68 (83%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EERE+QRL AT+INHQLKRLELKLKQFAE+ETLLLKECEQ ERVR R+S ER+RM S
Sbjct: 440 EEREVQRLTATVINHQLKRLELKLKQFAEVETLLLKECEQVERVRHRISAERVRMRSALL 499
Query: 183 GASSNNVP 206
G + + +P
Sbjct: 500 GPTGSGLP 507
>ref|NP_001146162.1| uncharacterized protein LOC100279731 [Zea mays]
gi|219886021|gb|ACL53385.1| unknown [Zea mays]
Length = 781
Score = 101 bits (252), Expect = 9e-20
Identities = 49/68 (72%), Positives = 57/68 (83%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EERE+QRL AT+INHQLKRLELKLKQFAE+ETLLLKECEQ ERVR R+S ER+RM S
Sbjct: 608 EEREVQRLTATVINHQLKRLELKLKQFAEVETLLLKECEQVERVRHRISAERVRMRSALL 667
Query: 183 GASSNNVP 206
G + + +P
Sbjct: 668 GPTGSGLP 675
>ref|XP_003578845.1| PREDICTED: SWI/SNF complex subunit SWI3C-like [Brachypodium
distachyon]
Length = 778
Score = 100 bits (249), Expect = 2e-19
Identities = 51/74 (68%), Positives = 62/74 (83%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EEREIQRL ATIINHQLKRLELKLKQFAE+ETLLLKE EQ ER RQ L+ +R+R+MS RF
Sbjct: 597 EEREIQRLAATIINHQLKRLELKLKQFAEIETLLLKESEQVERARQNLTAQRVRVMSARF 656
Query: 183 GASSNNVPSAGGAA 224
++ ++P GG++
Sbjct: 657 ASAGGSMP--GGSS 668
>ref|XP_004978879.1| PREDICTED: SWI/SNF complex subunit SWI3C-like isoform X2 [Setaria
italica]
Length = 783
Score = 100 bits (248), Expect = 3e-19
Identities = 52/74 (70%), Positives = 60/74 (81%), Gaps = 5/74 (6%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EERE+QRL AT+INHQLKRLELKLKQFAE+ETLLLKECEQ ERVRQR+S +R RM S
Sbjct: 609 EEREVQRLAATVINHQLKRLELKLKQFAEVETLLLKECEQVERVRQRISADRARMRSAML 668
Query: 183 GA-----SSNNVPS 209
G+ SS+ +PS
Sbjct: 669 GSTGMPGSSSTMPS 682
>ref|XP_004978878.1| PREDICTED: SWI/SNF complex subunit SWI3C-like isoform X1 [Setaria
italica]
Length = 786
Score = 100 bits (248), Expect = 3e-19
Identities = 52/74 (70%), Positives = 60/74 (81%), Gaps = 5/74 (6%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EERE+QRL AT+INHQLKRLELKLKQFAE+ETLLLKECEQ ERVRQR+S +R RM S
Sbjct: 612 EEREVQRLAATVINHQLKRLELKLKQFAEVETLLLKECEQVERVRQRISADRARMRSAML 671
Query: 183 GA-----SSNNVPS 209
G+ SS+ +PS
Sbjct: 672 GSTGMPGSSSTMPS 685
>gb|EMS49851.1| hypothetical protein TRIUR3_16622 [Triticum urartu]
Length = 235
Score = 99.8 bits (247), Expect = 3e-19
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EEREIQRL ATIINHQLKRLELKLKQFAE+ETLLLKE EQ ER RQ L+ +R+R MS RF
Sbjct: 50 EEREIQRLAATIINHQLKRLELKLKQFAEVETLLLKESEQVERARQNLTAQRVRFMSARF 109
Query: 183 GASSNNVPSAGGA 221
+S +P +
Sbjct: 110 ASSGGPMPGGSSS 122
>ref|XP_002284548.2| PREDICTED: SWI/SNF complex subunit SWI3C-like [Vitis vinifera]
Length = 771
Score = 99.4 bits (246), Expect = 5e-19
Identities = 50/68 (73%), Positives = 56/68 (82%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EEREIQRL A IINHQLKRLELKLKQFAE+ETLL+KECEQ ER RQR + ER R++STRF
Sbjct: 622 EEREIQRLSANIINHQLKRLELKLKQFAEVETLLMKECEQVERARQRFAAERARIISTRF 681
Query: 183 GASSNNVP 206
G + P
Sbjct: 682 GPTGVTSP 689
>emb|CBI18988.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 99.4 bits (246), Expect = 5e-19
Identities = 50/68 (73%), Positives = 56/68 (82%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EEREIQRL A IINHQLKRLELKLKQFAE+ETLL+KECEQ ER RQR + ER R++STRF
Sbjct: 504 EEREIQRLSANIINHQLKRLELKLKQFAEVETLLMKECEQVERARQRFAAERARIISTRF 563
Query: 183 GASSNNVP 206
G + P
Sbjct: 564 GPTGVTSP 571
>emb|CAN83645.1| hypothetical protein VITISV_016194 [Vitis vinifera]
Length = 334
Score = 99.4 bits (246), Expect = 5e-19
Identities = 50/68 (73%), Positives = 56/68 (82%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EEREIQRL A IINHQLKRLELKLKQFAE+ETLL+KECEQ ER RQR + ER R++STRF
Sbjct: 163 EEREIQRLSANIINHQLKRLELKLKQFAEVETLLMKECEQVERARQRFAAERARIISTRF 222
Query: 183 GASSNNVP 206
G + P
Sbjct: 223 GPTGVTSP 230
>ref|NP_173589.1| SWI/SNF complex subunit SWI3C [Arabidopsis thaliana]
gi|75315301|sp|Q9XI07.1|SWI3C_ARATH RecName:
Full=SWI/SNF complex subunit SWI3C; Short=AtSWI3C;
AltName: Full=Transcription regulatory protein SWI3C
gi|5263321|gb|AAD41423.1|AC007727_12 Contains similarity
to gb|AF033823 moira protein from Drosophila
melanogaster and contains a PF|00249 Myb-like
DNA-binding domain. EST gb|Z25609 comes from this gene
[Arabidopsis thaliana] gi|20259454|gb|AAM13847.1|
putative transcriptional regulatory protein [Arabidopsis
thaliana] gi|21436147|gb|AAM51320.1| putative
transcriptional regulatory protein [Arabidopsis
thaliana] gi|332192023|gb|AEE30144.1| SWI/SNF complex
subunit SWI3C [Arabidopsis thaliana]
Length = 807
Score = 98.6 bits (244), Expect = 8e-19
Identities = 48/68 (70%), Positives = 55/68 (80%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EEREIQRL A I+NHQLKR+ELKLKQFAE+ETLL+KECEQ E+ RQR S ER RM+S RF
Sbjct: 601 EEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQRFSAERARMLSARF 660
Query: 183 GASSNNVP 206
G+ P
Sbjct: 661 GSPGGISP 668
>dbj|BAJ93481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 781
Score = 98.6 bits (244), Expect = 8e-19
Identities = 49/73 (67%), Positives = 57/73 (78%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EEREIQRL ATIINHQLKRLELKLKQFAE+ETLLLKE EQ ER RQ L+ +R+R MS RF
Sbjct: 600 EEREIQRLAATIINHQLKRLELKLKQFAEVETLLLKESEQVERARQNLTAQRVRFMSARF 659
Query: 183 GASSNNVPSAGGA 221
++ +P +
Sbjct: 660 ASTGGPMPGGSSS 672
>dbj|BAF93190.1| putative SWIRM domain containing protein [Hordeum vulgare]
Length = 177
Score = 98.6 bits (244), Expect = 8e-19
Identities = 49/73 (67%), Positives = 57/73 (78%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EEREIQRL ATIINHQLKRLELKLKQFAE+ETLLLKE EQ ER RQ L+ +R+R MS RF
Sbjct: 10 EEREIQRLAATIINHQLKRLELKLKQFAEVETLLLKESEQVERARQNLTAQRVRFMSARF 69
Query: 183 GASSNNVPSAGGA 221
++ +P +
Sbjct: 70 ASTGGPMPGGSSS 82
>ref|XP_006416274.1| hypothetical protein EUTSA_v10006819mg [Eutrema salsugineum]
gi|557094045|gb|ESQ34627.1| hypothetical protein
EUTSA_v10006819mg [Eutrema salsugineum]
Length = 813
Score = 98.2 bits (243), Expect = 1e-18
Identities = 47/68 (69%), Positives = 56/68 (82%)
Frame = +3
Query: 3 EEREIQRLVATIINHQLKRLELKLKQFAELETLLLKECEQSERVRQRLSTERIRMMSTRF 182
EEREIQRL A I+NHQLKR+ELKLKQFAE+ETLL+KECEQ E+ RQR + ER RM+S RF
Sbjct: 605 EEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQRFAAERARMLSARF 664
Query: 183 GASSNNVP 206
G++ P
Sbjct: 665 GSAGGISP 672