BLASTX nr result

ID: Zingiber24_contig00030424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00030424
         (302 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX90793.1| VPS35 B isoform 3 [Theobroma cacao]                     55   1e-05
gb|EOX90791.1| VPS35 A isoform 1 [Theobroma cacao]                     55   1e-05
ref|XP_004146152.1| PREDICTED: vacuolar protein sorting-associat...    55   1e-05

>gb|EOX90793.1| VPS35 B isoform 3 [Theobroma cacao]
          Length = 561

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = +3

Query: 3   FASTLRYVEFQKQKGGVIGEKYEPIKI 83
           FASTLRY+EFQKQKGG +GEKYEPIK+
Sbjct: 535 FASTLRYIEFQKQKGGAVGEKYEPIKV 561


>gb|EOX90791.1| VPS35 A isoform 1 [Theobroma cacao]
          Length = 790

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = +3

Query: 3   FASTLRYVEFQKQKGGVIGEKYEPIKI 83
           FASTLRY+EFQKQKGG +GEKYEPIK+
Sbjct: 764 FASTLRYIEFQKQKGGAVGEKYEPIKV 790


>ref|XP_004146152.1| PREDICTED: vacuolar protein sorting-associated protein 35A-like
           [Cucumis sativus] gi|449524673|ref|XP_004169346.1|
           PREDICTED: vacuolar protein sorting-associated protein
           35A-like [Cucumis sativus]
          Length = 790

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = +3

Query: 3   FASTLRYVEFQKQKGGVIGEKYEPIKI 83
           FASTLRY+EFQKQKGG +GEKYEPIK+
Sbjct: 764 FASTLRYIEFQKQKGGAVGEKYEPIKV 790


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