BLASTX nr result

ID: Zingiber24_contig00030402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00030402
         (259 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFE55548.1| NF-YB4 [Hordeum vulgare]                               122   5e-26
ref|XP_004961155.1| PREDICTED: nuclear transcription factor Y su...   120   1e-25
ref|XP_004961154.1| PREDICTED: nuclear transcription factor Y su...   120   1e-25
ref|NP_001056383.1| Os05g0573500 [Oryza sativa Japonica Group] g...   120   1e-25
ref|XP_003567850.1| PREDICTED: nuclear transcription factor Y su...   120   2e-25
ref|XP_006843215.1| hypothetical protein AMTR_s00080p00025480 [A...   120   2e-25
gb|AAU44106.1| putative transcription factor HAP3 [Oryza sativa ...   117   2e-24
gb|EEE64770.1| hypothetical protein OsJ_19626 [Oryza sativa Japo...   117   2e-24
ref|XP_006361771.1| PREDICTED: nuclear transcription factor Y su...   116   4e-24
ref|XP_006361769.1| PREDICTED: nuclear transcription factor Y su...   116   4e-24
ref|XP_002440289.1| hypothetical protein SORBIDRAFT_09g029140 [S...   116   4e-24
ref|XP_002523912.1| ccaat-binding transcription factor subunit A...   115   6e-24
gb|EMT12224.1| Nuclear transcription factor Y subunit B-4 [Aegil...   115   8e-24
ref|XP_004246698.1| PREDICTED: nuclear transcription factor Y su...   115   8e-24
ref|XP_004246697.1| PREDICTED: nuclear transcription factor Y su...   115   8e-24
ref|XP_006654820.1| PREDICTED: nuclear transcription factor Y su...   114   1e-23
ref|XP_006654819.1| PREDICTED: nuclear transcription factor Y su...   114   1e-23
ref|XP_003625575.1| Nuclear transcription factor Y subunit B-3 [...   114   1e-23
ref|XP_003623108.1| Nuclear transcription factor Y subunit B-3, ...   114   1e-23
gb|EEC79736.1| hypothetical protein OsI_21074 [Oryza sativa Indi...   114   1e-23

>gb|AFE55548.1| NF-YB4 [Hordeum vulgare]
          Length = 139

 Score =  122 bits (306), Expect = 5e-26
 Identities = 59/78 (75%), Positives = 72/78 (92%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNV-KG 177
           EFISF+TSEASDKC +EKRKTINGDDL+W+MGTLGFE+YVEPLKLYL+LYREMEG+  KG
Sbjct: 56  EFISFITSEASDKCMKEKRKTINGDDLIWSMGTLGFEDYVEPLKLYLKLYREMEGDTSKG 115

Query: 178 SRSIDQSGK*DGAINGEP 231
           S+S +Q+GK + A+NG+P
Sbjct: 116 SKS-EQAGKKEVALNGQP 132


>ref|XP_004961155.1| PREDICTED: nuclear transcription factor Y subunit B-4-like isoform
           X2 [Setaria italica]
          Length = 141

 Score =  120 bits (302), Expect = 1e-25
 Identities = 56/77 (72%), Positives = 68/77 (88%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNVKGS 180
           EFISF+TSEASDKC +EKRKTINGDDL+W++GTLGFEEYVEPLK YL+LYRE EG+ KGS
Sbjct: 58  EFISFITSEASDKCMKEKRKTINGDDLIWSLGTLGFEEYVEPLKHYLKLYRETEGDTKGS 117

Query: 181 RSIDQSGK*DGAINGEP 231
           +S DQ+GK +  ++ EP
Sbjct: 118 KSSDQAGKKEILLSVEP 134


>ref|XP_004961154.1| PREDICTED: nuclear transcription factor Y subunit B-4-like isoform
           X1 [Setaria italica]
          Length = 163

 Score =  120 bits (302), Expect = 1e-25
 Identities = 56/77 (72%), Positives = 68/77 (88%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNVKGS 180
           EFISF+TSEASDKC +EKRKTINGDDL+W++GTLGFEEYVEPLK YL+LYRE EG+ KGS
Sbjct: 58  EFISFITSEASDKCMKEKRKTINGDDLIWSLGTLGFEEYVEPLKHYLKLYRETEGDTKGS 117

Query: 181 RSIDQSGK*DGAINGEP 231
           +S DQ+GK +  ++ EP
Sbjct: 118 KSSDQAGKKEILLSVEP 134


>ref|NP_001056383.1| Os05g0573500 [Oryza sativa Japonica Group]
           gi|73919926|sp|Q65XK1.2|NFYB4_ORYSJ RecName:
           Full=Nuclear transcription factor Y subunit B-4;
           AltName: Full=OsNF-YB-4; AltName: Full=Transcriptional
           activator HAP3C gi|30409463|dbj|BAC76333.1| HAP3 [Oryza
           sativa Japonica Group] gi|113579934|dbj|BAF18297.1|
           Os05g0573500 [Oryza sativa Japonica Group]
          Length = 143

 Score =  120 bits (302), Expect = 1e-25
 Identities = 56/77 (72%), Positives = 67/77 (87%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNVKGS 180
           EFISF+TSEASDKC +EKRKTINGDDL+W+MGTLGFE+YVEPLKLYL+LYRE EG+ KGS
Sbjct: 60  EFISFITSEASDKCLKEKRKTINGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGDTKGS 119

Query: 181 RSIDQSGK*DGAINGEP 231
           R+ +   K D  +NG+P
Sbjct: 120 RASELPVKKDVVLNGDP 136


>ref|XP_003567850.1| PREDICTED: nuclear transcription factor Y subunit B-4-like
           [Brachypodium distachyon]
          Length = 140

 Score =  120 bits (301), Expect = 2e-25
 Identities = 59/78 (75%), Positives = 70/78 (89%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGN-VKG 177
           EFISF+TSEASDKC +EKRKTINGDDL+W+MGTLGFE+YVEPLKLYL+LYREMEG+  KG
Sbjct: 57  EFISFITSEASDKCMKEKRKTINGDDLIWSMGTLGFEDYVEPLKLYLKLYREMEGDTTKG 116

Query: 178 SRSIDQSGK*DGAINGEP 231
           SRS +Q+GK    +NG+P
Sbjct: 117 SRS-EQAGKKGIVLNGQP 133


>ref|XP_006843215.1| hypothetical protein AMTR_s00080p00025480 [Amborella trichopoda]
           gi|548845499|gb|ERN04890.1| hypothetical protein
           AMTR_s00080p00025480 [Amborella trichopoda]
          Length = 248

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/72 (76%), Positives = 65/72 (90%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNVKGS 180
           EFISF+TSEASDKCQREKRKTINGDDLLWAM TLGFE+Y++PLK+YLQ+YREMEG+ KG+
Sbjct: 133 EFISFITSEASDKCQREKRKTINGDDLLWAMSTLGFEDYIDPLKVYLQMYREMEGDSKGT 192

Query: 181 RSIDQSGK*DGA 216
           +  DQS K + A
Sbjct: 193 KGGDQSAKKESA 204


>gb|AAU44106.1| putative transcription factor HAP3 [Oryza sativa Japonica Group]
          Length = 241

 Score =  117 bits (292), Expect = 2e-24
 Identities = 57/84 (67%), Positives = 69/84 (82%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNVKGS 180
           EFISF+TSEASDKC +EKRKTINGDDL+W+MGTLGFE+YVEPLKLYL+LYR  EG+ KGS
Sbjct: 60  EFISFITSEASDKCLKEKRKTINGDDLIWSMGTLGFEDYVEPLKLYLRLYR--EGDTKGS 117

Query: 181 RSIDQSGK*DGAINGEPRDVVGNY 252
           R+ +   K D  +NG+P   + NY
Sbjct: 118 RASELPVKKDVVLNGDPGSSLVNY 141


>gb|EEE64770.1| hypothetical protein OsJ_19626 [Oryza sativa Japonica Group]
          Length = 246

 Score =  117 bits (292), Expect = 2e-24
 Identities = 57/84 (67%), Positives = 69/84 (82%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNVKGS 180
           EFISF+TSEASDKC +EKRKTINGDDL+W+MGTLGFE+YVEPLKLYL+LYR  EG+ KGS
Sbjct: 60  EFISFITSEASDKCLKEKRKTINGDDLIWSMGTLGFEDYVEPLKLYLRLYR--EGDTKGS 117

Query: 181 RSIDQSGK*DGAINGEPRDVVGNY 252
           R+ +   K D  +NG+P   + NY
Sbjct: 118 RASELPVKKDVVLNGDPGSSLVNY 141


>ref|XP_006361771.1| PREDICTED: nuclear transcription factor Y subunit B-10-like isoform
           X3 [Solanum tuberosum]
          Length = 163

 Score =  116 bits (290), Expect = 4e-24
 Identities = 57/76 (75%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNVKG- 177
           EFISF+TSEASDKCQREKRKTINGDDLLWAM TLGFE+Y+EPLK+YL  YREMEG+ KG 
Sbjct: 72  EFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREMEGDTKGT 131

Query: 178 SRSIDQSGK*DGAING 225
           S++ D S K DG  +G
Sbjct: 132 SKAADGSTKRDGMQHG 147


>ref|XP_006361769.1| PREDICTED: nuclear transcription factor Y subunit B-10-like isoform
           X1 [Solanum tuberosum]
          Length = 180

 Score =  116 bits (290), Expect = 4e-24
 Identities = 57/76 (75%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNVKG- 177
           EFISF+TSEASDKCQREKRKTINGDDLLWAM TLGFE+Y+EPLK+YL  YREMEG+ KG 
Sbjct: 72  EFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREMEGDTKGT 131

Query: 178 SRSIDQSGK*DGAING 225
           S++ D S K DG  +G
Sbjct: 132 SKAADGSTKRDGMQHG 147


>ref|XP_002440289.1| hypothetical protein SORBIDRAFT_09g029140 [Sorghum bicolor]
           gi|241945574|gb|EES18719.1| hypothetical protein
           SORBIDRAFT_09g029140 [Sorghum bicolor]
          Length = 135

 Score =  116 bits (290), Expect = 4e-24
 Identities = 54/77 (70%), Positives = 67/77 (87%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNVKGS 180
           EFISF+TSEASDKC +E+RKTINGDD++W++GTLGFEEYVEPLK+YL+ YR  EG+ KGS
Sbjct: 54  EFISFITSEASDKCMKERRKTINGDDIIWSLGTLGFEEYVEPLKIYLKNYR--EGDTKGS 111

Query: 181 RSIDQSGK*DGAINGEP 231
           +S DQ+GK    +NGEP
Sbjct: 112 KSSDQNGKKQILLNGEP 128


>ref|XP_002523912.1| ccaat-binding transcription factor subunit A, putative [Ricinus
           communis] gi|223536842|gb|EEF38481.1| ccaat-binding
           transcription factor subunit A, putative [Ricinus
           communis]
          Length = 174

 Score =  115 bits (288), Expect = 6e-24
 Identities = 59/78 (75%), Positives = 66/78 (84%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNVKGS 180
           EFISF+TSEASDKCQ+EKRKTINGDDLLWAM TLGFE+Y+EPLK+YL  YREMEG+ KGS
Sbjct: 65  EFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREMEGDTKGS 124

Query: 181 -RSIDQSGK*DGAINGEP 231
            R  D SGK D A+ G P
Sbjct: 125 ARGGDGSGKRD-AMGGLP 141


>gb|EMT12224.1| Nuclear transcription factor Y subunit B-4 [Aegilops tauschii]
          Length = 170

 Score =  115 bits (287), Expect = 8e-24
 Identities = 56/77 (72%), Positives = 70/77 (90%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNVKGS 180
           EFISF+TSEASDKC +EKRKTINGDDL+W+MGTLGFE+YVEPLKLYL+LYRE + + KGS
Sbjct: 53  EFISFITSEASDKCMKEKRKTINGDDLIWSMGTLGFEDYVEPLKLYLKLYREGDTS-KGS 111

Query: 181 RSIDQSGK*DGAINGEP 231
           +S +Q+GK + A+NG+P
Sbjct: 112 KS-EQAGKKEVALNGQP 127


>ref|XP_004246698.1| PREDICTED: nuclear transcription factor Y subunit B-8-like isoform
           2 [Solanum lycopersicum]
          Length = 180

 Score =  115 bits (287), Expect = 8e-24
 Identities = 56/72 (77%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNVKG- 177
           EFISF+TSEASDKCQREKRKTINGDDLLWAM TLGFE+Y+EPLK+YL  YREMEG+ KG 
Sbjct: 72  EFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREMEGDTKGT 131

Query: 178 SRSIDQSGK*DG 213
           S++ D S K DG
Sbjct: 132 SKAADGSTKRDG 143


>ref|XP_004246697.1| PREDICTED: nuclear transcription factor Y subunit B-8-like isoform
           1 [Solanum lycopersicum]
          Length = 188

 Score =  115 bits (287), Expect = 8e-24
 Identities = 56/72 (77%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNVKG- 177
           EFISF+TSEASDKCQREKRKTINGDDLLWAM TLGFE+Y+EPLK+YL  YREMEG+ KG 
Sbjct: 80  EFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREMEGDTKGT 139

Query: 178 SRSIDQSGK*DG 213
           S++ D S K DG
Sbjct: 140 SKAADGSTKRDG 151


>ref|XP_006654820.1| PREDICTED: nuclear transcription factor Y subunit B-4-like isoform
           X2 [Oryza brachyantha]
          Length = 141

 Score =  114 bits (285), Expect = 1e-23
 Identities = 54/77 (70%), Positives = 65/77 (84%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNVKGS 180
           EFISF+TSEASDKC +EKRKTINGDDL+W+MGTLGFE+YVEPLKLYL+LYRE EG+ K  
Sbjct: 58  EFISFITSEASDKCLKEKRKTINGDDLIWSMGTLGFEDYVEPLKLYLKLYRETEGDSKIP 117

Query: 181 RSIDQSGK*DGAINGEP 231
           R+ +   K D  +NG+P
Sbjct: 118 RASEHPVKKDILLNGDP 134


>ref|XP_006654819.1| PREDICTED: nuclear transcription factor Y subunit B-4-like isoform
           X1 [Oryza brachyantha]
          Length = 167

 Score =  114 bits (285), Expect = 1e-23
 Identities = 54/77 (70%), Positives = 65/77 (84%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNVKGS 180
           EFISF+TSEASDKC +EKRKTINGDDL+W+MGTLGFE+YVEPLKLYL+LYRE EG+ K  
Sbjct: 58  EFISFITSEASDKCLKEKRKTINGDDLIWSMGTLGFEDYVEPLKLYLKLYRETEGDSKIP 117

Query: 181 RSIDQSGK*DGAINGEP 231
           R+ +   K D  +NG+P
Sbjct: 118 RASEHPVKKDILLNGDP 134


>ref|XP_003625575.1| Nuclear transcription factor Y subunit B-3 [Medicago truncatula]
           gi|355500590|gb|AES81793.1| Nuclear transcription factor
           Y subunit B-3 [Medicago truncatula]
           gi|388523199|gb|AFK49652.1| nuclear transcription factor
           Y subunit B2 [Medicago truncatula]
          Length = 171

 Score =  114 bits (285), Expect = 1e-23
 Identities = 56/79 (70%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNVKGS 180
           EFISF+TSEASDKCQREKRKTINGDDLLWAM TLGFE+Y++PLK+YL  YREMEG+ KGS
Sbjct: 64  EFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGS 123

Query: 181 -RSIDQSGK*DGAINGEPR 234
            +  D SGK D      P+
Sbjct: 124 AKGGDTSGKKDVQQGSNPQ 142


>ref|XP_003623108.1| Nuclear transcription factor Y subunit B-3, partial [Medicago
           truncatula] gi|355498123|gb|AES79326.1| Nuclear
           transcription factor Y subunit B-3, partial [Medicago
           truncatula]
          Length = 474

 Score =  114 bits (285), Expect = 1e-23
 Identities = 56/79 (70%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNVKGS 180
           EFISF+TSEASDKCQREKRKTINGDDLLWAM TLGFE+Y++PLK+YL  YREMEG+ KGS
Sbjct: 64  EFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGS 123

Query: 181 -RSIDQSGK*DGAINGEPR 234
            +  D SGK D      P+
Sbjct: 124 AKGGDTSGKKDVQQGSNPQ 142


>gb|EEC79736.1| hypothetical protein OsI_21074 [Oryza sativa Indica Group]
          Length = 230

 Score =  114 bits (285), Expect = 1e-23
 Identities = 55/77 (71%), Positives = 66/77 (85%)
 Frame = +1

Query: 1   EFISFVTSEASDKCQREKRKTINGDDLLWAMGTLGFEEYVEPLKLYLQLYREMEGNVKGS 180
           EFISF+TSEASDKC +EKRKTINGDDL+W+MGTLGFE+YVEPLKLYL+LYR  EG+ KGS
Sbjct: 61  EFISFITSEASDKCLKEKRKTINGDDLIWSMGTLGFEDYVEPLKLYLRLYR--EGDTKGS 118

Query: 181 RSIDQSGK*DGAINGEP 231
           R+ +   K D  +NG+P
Sbjct: 119 RASELPVKKDVVLNGDP 135