BLASTX nr result
ID: Zingiber24_contig00030277
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00030277
(446 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004975878.1| PREDICTED: uncharacterized protein LOC101752... 137 1e-30
ref|XP_003579918.1| PREDICTED: uncharacterized protein LOC100826... 137 2e-30
ref|XP_006647423.1| PREDICTED: uncharacterized protein LOC102707... 129 3e-28
tpg|DAA37419.1| TPA: hypothetical protein ZEAMMB73_349198 [Zea m... 129 4e-28
tpg|DAA37418.1| TPA: hypothetical protein ZEAMMB73_349198 [Zea m... 129 4e-28
gb|EAZ23574.1| hypothetical protein OsJ_07273 [Oryza sativa Japo... 128 9e-28
ref|NP_001143878.1| uncharacterized protein LOC100276679 [Zea ma... 127 1e-27
gb|EMT18603.1| General negative regulator of transcription subun... 126 3e-27
gb|EMS61725.1| General negative regulator of transcription subun... 126 3e-27
ref|XP_003575233.1| PREDICTED: uncharacterized protein LOC100842... 125 8e-27
ref|XP_002447976.1| hypothetical protein SORBIDRAFT_06g019180 [S... 125 8e-27
emb|CBI35016.3| unnamed protein product [Vitis vinifera] 124 1e-26
ref|XP_002281744.1| PREDICTED: uncharacterized protein LOC100261... 124 1e-26
ref|XP_006829471.1| hypothetical protein AMTR_s00074p00034110 [A... 120 2e-25
ref|XP_004302381.1| PREDICTED: eukaryotic initiation factor 4A-3... 117 2e-24
gb|EMJ16683.1| hypothetical protein PRUPE_ppa006654mg [Prunus pe... 117 2e-24
ref|XP_006354813.1| PREDICTED: mediator of RNA polymerase II tra... 117 2e-24
ref|XP_004236157.1| PREDICTED: uncharacterized protein LOC101261... 117 2e-24
ref|XP_006344994.1| PREDICTED: mediator of RNA polymerase II tra... 115 5e-24
ref|XP_006344993.1| PREDICTED: mediator of RNA polymerase II tra... 115 5e-24
>ref|XP_004975878.1| PREDICTED: uncharacterized protein LOC101752921 [Setaria italica]
Length = 355
Score = 137 bits (346), Expect = 1e-30
Identities = 72/141 (51%), Positives = 87/141 (61%), Gaps = 9/141 (6%)
Frame = +3
Query: 3 KPEPIHNTKRAWRPDDTSRPPSLPTISKQWIFPANAG--WNHR--ISQQKGXXXXXXXXX 170
+PEPI + RAW PDD RP SLP+ISKQ FPA+ G W + Q+G
Sbjct: 213 RPEPIRSKARAWAPDDIFRPQSLPSISKQASFPASIGNCWAGMGMSAAQQGILSLPLSCP 272
Query: 171 XXXEDLDLTDSNFLPCSCGFRLCLFCHKRILEADGRCPGCRQQYNSIP-----GGTVEVN 335
EDLD TDS+FLPC CGF LCLFCH RILEADGRCPGCR+QYN++P GG
Sbjct: 273 ICYEDLDPTDSSFLPCPCGFHLCLFCHNRILEADGRCPGCRKQYNTVPAAEGGGGPRATM 332
Query: 336 MGGARAPILQMQLSHICNLRP 398
+G A I ++LS C++ P
Sbjct: 333 IGREMANIAPVRLSRSCSMGP 353
>ref|XP_003579918.1| PREDICTED: uncharacterized protein LOC100826612 [Brachypodium
distachyon]
Length = 349
Score = 137 bits (344), Expect = 2e-30
Identities = 70/137 (51%), Positives = 87/137 (63%), Gaps = 5/137 (3%)
Frame = +3
Query: 3 KPEPIHNTKRAWRPDDTSRPPSLPTISKQWIFPANAG--WNHRISQQKGXXXXXXXXXXX 176
+ +PI + RAW PDD RP SLP+ISKQ FPAN G W + Q+
Sbjct: 211 RKDPICSNTRAWTPDDMFRPQSLPSISKQASFPANIGNCWVGMGAAQQSVLSLPLSCPIC 270
Query: 177 XEDLDLTDSNFLPCSCGFRLCLFCHKRILEADGRCPGCRQQYNSIPGGTVE---VNMGGA 347
EDLD TDS+FLPC CGF LCLFCHKRILEAD RCPGCR+QYN++P G V+ V +G
Sbjct: 271 YEDLDPTDSSFLPCPCGFHLCLFCHKRILEADERCPGCRKQYNAVPAGGVKAPAVGIGRE 330
Query: 348 RAPILQMQLSHICNLRP 398
A + ++LS C++ P
Sbjct: 331 MANGVPLRLSRSCSMGP 347
>ref|XP_006647423.1| PREDICTED: uncharacterized protein LOC102707188 [Oryza brachyantha]
Length = 347
Score = 129 bits (325), Expect = 3e-28
Identities = 74/141 (52%), Positives = 85/141 (60%), Gaps = 9/141 (6%)
Frame = +3
Query: 3 KPEPIHNTKRAWRPDDTSRPPSLPTISKQWIFPANAGWNHRI-----SQQKGXXXXXXXX 167
+ EPI + RAW PDD RP SLP++SKQ FPA+ G N + S QKG
Sbjct: 213 RQEPIKSRTRAWSPDDVFRPQSLPSLSKQVSFPASMG-NCWVAMGIGSAQKGILSLPISC 271
Query: 168 XXXXEDLDLTDSNFLPCSCGFRLCLFCHKRILEADGRCPGCRQQYN--SIPGGTV--EVN 335
EDLD TDS+FLPC CGF LCLFCHKRILEADGRCPGCR+QY S GGT+ E
Sbjct: 272 PICYEDLDPTDSSFLPCPCGFHLCLFCHKRILEADGRCPGCRKQYTPASSGGGTIGNECE 331
Query: 336 MGGARAPILQMQLSHICNLRP 398
MG R LS C++ P
Sbjct: 332 MGNLR-------LSRSCSMGP 345
>tpg|DAA37419.1| TPA: hypothetical protein ZEAMMB73_349198 [Zea mays]
gi|414586849|tpg|DAA37420.1| TPA: hypothetical protein
ZEAMMB73_349198 [Zea mays]
Length = 178
Score = 129 bits (324), Expect = 4e-28
Identities = 69/144 (47%), Positives = 87/144 (60%), Gaps = 12/144 (8%)
Frame = +3
Query: 3 KPEPIHNTKRAWRPDDTSRPPSLPTISKQWIFPANAG--WNHR--ISQQKGXXXXXXXXX 170
KPEPI + RAW PDD RP SLP+ISKQ FPA+ G W + Q+G
Sbjct: 37 KPEPIQSKTRAWAPDDIFRPQSLPSISKQTSFPASIGNRWQDMGMSAAQQGILSLPLSCP 96
Query: 171 XXXEDLDLTDSNFLPCSCGFRLCLFCHKRILEADGRCPGCRQQYNSI---PGGTVEVNMG 341
+DLDLTDS+F PC CGF +CLFCH RIL DGRCPGCR+QYN++ GG G
Sbjct: 97 ICCDDLDLTDSSFCPCPCGFHMCLFCHNRILVEDGRCPGCRKQYNTVSAAEGG----GGG 152
Query: 342 GARAPI-----LQMQLSHICNLRP 398
G+RA + ++ +LS C++ P
Sbjct: 153 GSRATVGTGREMEKRLSRSCSMGP 176
>tpg|DAA37418.1| TPA: hypothetical protein ZEAMMB73_349198 [Zea mays]
Length = 347
Score = 129 bits (324), Expect = 4e-28
Identities = 69/144 (47%), Positives = 87/144 (60%), Gaps = 12/144 (8%)
Frame = +3
Query: 3 KPEPIHNTKRAWRPDDTSRPPSLPTISKQWIFPANAG--WNHR--ISQQKGXXXXXXXXX 170
KPEPI + RAW PDD RP SLP+ISKQ FPA+ G W + Q+G
Sbjct: 206 KPEPIQSKTRAWAPDDIFRPQSLPSISKQTSFPASIGNRWQDMGMSAAQQGILSLPLSCP 265
Query: 171 XXXEDLDLTDSNFLPCSCGFRLCLFCHKRILEADGRCPGCRQQYNSI---PGGTVEVNMG 341
+DLDLTDS+F PC CGF +CLFCH RIL DGRCPGCR+QYN++ GG G
Sbjct: 266 ICCDDLDLTDSSFCPCPCGFHMCLFCHNRILVEDGRCPGCRKQYNTVSAAEGG----GGG 321
Query: 342 GARAPI-----LQMQLSHICNLRP 398
G+RA + ++ +LS C++ P
Sbjct: 322 GSRATVGTGREMEKRLSRSCSMGP 345
>gb|EAZ23574.1| hypothetical protein OsJ_07273 [Oryza sativa Japonica Group]
Length = 325
Score = 128 bits (321), Expect = 9e-28
Identities = 69/137 (50%), Positives = 84/137 (61%), Gaps = 5/137 (3%)
Frame = +3
Query: 3 KPEPIHNTKRAWRPDDTSRPPSLPTISKQWIFPANAGWNHRI-----SQQKGXXXXXXXX 167
+ EPI ++ RAW PDD RP SLP++SKQ FPA+ G N + S QKG
Sbjct: 191 RQEPIKSSTRAWSPDDAFRPQSLPSLSKQVSFPASMG-NCWVAMGIGSAQKGVPSKPTSC 249
Query: 168 XXXXEDLDLTDSNFLPCSCGFRLCLFCHKRILEADGRCPGCRQQYNSIPGGTVEVNMGGA 347
EDLD TDS+FLPC CGF LCLFCHKRILEADGRCP CR+QY S G V G+
Sbjct: 250 PICYEDLDPTDSSFLPCPCGFHLCLFCHKRILEADGRCPACRKQYISASSGGETV---GS 306
Query: 348 RAPILQMQLSHICNLRP 398
+ ++LS C++ P
Sbjct: 307 EREMGNLRLSRSCSMGP 323
>ref|NP_001143878.1| uncharacterized protein LOC100276679 [Zea mays]
gi|195628694|gb|ACG36177.1| hypothetical protein [Zea
mays]
Length = 347
Score = 127 bits (320), Expect = 1e-27
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 12/144 (8%)
Frame = +3
Query: 3 KPEPIHNTKRAWRPDDTSRPPSLPTISKQWIFPANAG--WNHR--ISQQKGXXXXXXXXX 170
KPEPI + RAW PDD RP SLP+ISKQ FP + G W + Q+G
Sbjct: 206 KPEPIQSKTRAWAPDDIFRPQSLPSISKQTSFPTSIGNRWQDMGMSAAQQGILSLPLSCP 265
Query: 171 XXXEDLDLTDSNFLPCSCGFRLCLFCHKRILEADGRCPGCRQQYNSI---PGGTVEVNMG 341
+DLDLTDS+F PC CGF +CLFCH RIL DGRCPGCR+QYN++ GG G
Sbjct: 266 ICCDDLDLTDSSFCPCPCGFHMCLFCHNRILVEDGRCPGCRKQYNTVSAAEGG----GGG 321
Query: 342 GARAPI-----LQMQLSHICNLRP 398
G+RA + ++ +LS C++ P
Sbjct: 322 GSRATVGTGREMEKRLSRSCSMGP 345
>gb|EMT18603.1| General negative regulator of transcription subunit 4 [Aegilops
tauschii]
Length = 347
Score = 126 bits (317), Expect = 3e-27
Identities = 69/135 (51%), Positives = 81/135 (60%), Gaps = 3/135 (2%)
Frame = +3
Query: 3 KPEPIHNTKRAWRPDDTSRPPSLPTISKQWIFPANAG--WNHRISQ-QKGXXXXXXXXXX 173
+ EPI + RAW PDDT RP SLP+ISKQ FPA G W +S +
Sbjct: 220 RTEPIRSNARAWTPDDTFRPQSLPSISKQSSFPARIGNCWGMGMSAAHQSILSMPLSCPI 279
Query: 174 XXEDLDLTDSNFLPCSCGFRLCLFCHKRILEADGRCPGCRQQYNSIPGGTVEVNMGGARA 353
EDLD TDS+FLPC CGF LCLFCHKRILEAD RCPGCR+ YN+ G GA A
Sbjct: 280 CYEDLDPTDSSFLPCPCGFHLCLFCHKRILEADARCPGCRKLYNAGSAGE------GAPA 333
Query: 354 PILQMQLSHICNLRP 398
P+ +LS C++ P
Sbjct: 334 PV---RLSRSCSMGP 345
>gb|EMS61725.1| General negative regulator of transcription subunit 4 [Triticum
urartu]
Length = 347
Score = 126 bits (316), Expect = 3e-27
Identities = 69/135 (51%), Positives = 80/135 (59%), Gaps = 3/135 (2%)
Frame = +3
Query: 3 KPEPIHNTKRAWRPDDTSRPPSLPTISKQWIFPANAG--WNHRISQ-QKGXXXXXXXXXX 173
+ EPI + RAW PDDT RP SLP+ISKQ FPA G W +S +
Sbjct: 220 RTEPIRSNARAWTPDDTFRPQSLPSISKQSSFPARIGNCWGMGMSAAHQSILSMPLSCPI 279
Query: 174 XXEDLDLTDSNFLPCSCGFRLCLFCHKRILEADGRCPGCRQQYNSIPGGTVEVNMGGARA 353
EDLD TDS+FLPC CGF LCLFCHKRILEAD RCPGCR+ YNS G GA
Sbjct: 280 CYEDLDPTDSSFLPCPCGFHLCLFCHKRILEADARCPGCRKLYNSGSAGE------GAPT 333
Query: 354 PILQMQLSHICNLRP 398
P+ +LS C++ P
Sbjct: 334 PV---RLSRSCSMGP 345
>ref|XP_003575233.1| PREDICTED: uncharacterized protein LOC100842055 [Brachypodium
distachyon]
Length = 355
Score = 125 bits (313), Expect = 8e-27
Identities = 67/137 (48%), Positives = 81/137 (59%), Gaps = 5/137 (3%)
Frame = +3
Query: 3 KPEPIHNTKRAWRPDDTSRPPSLPTISKQWIFPANAGWNHRISQ-----QKGXXXXXXXX 167
+PE I + RAW PDD RP +LP++SKQ FP++ G N + QK
Sbjct: 221 RPESIKSQTRAWSPDDVFRPHTLPSLSKQVSFPSSMG-NCWVGMGIGAAQKSIISFQMSC 279
Query: 168 XXXXEDLDLTDSNFLPCSCGFRLCLFCHKRILEADGRCPGCRQQYNSIPGGTVEVNMGGA 347
EDLD TDS+FLPC CGF LCLFCHKRILEAD RCPGCR QY S P G G
Sbjct: 280 PICYEDLDPTDSSFLPCPCGFHLCLFCHKRILEADARCPGCRNQYKSTPLGG---EAGRE 336
Query: 348 RAPILQMQLSHICNLRP 398
++QM+LS C++ P
Sbjct: 337 IENLVQMRLSRSCSMGP 353
>ref|XP_002447976.1| hypothetical protein SORBIDRAFT_06g019180 [Sorghum bicolor]
gi|241939159|gb|EES12304.1| hypothetical protein
SORBIDRAFT_06g019180 [Sorghum bicolor]
Length = 352
Score = 125 bits (313), Expect = 8e-27
Identities = 64/141 (45%), Positives = 83/141 (58%), Gaps = 9/141 (6%)
Frame = +3
Query: 3 KPEPIHNTKRAWRPDDTSRPPSLPTISKQWIFPANAG--WNHR--ISQQKGXXXXXXXXX 170
+PEPI + RAW PDD RP SLP+ISKQ FPA+ G W + Q+G
Sbjct: 210 RPEPIRSKTRAWAPDDIFRPQSLPSISKQASFPASIGNRWPEMGMSAAQQGILSLPLSCP 269
Query: 171 XXXEDLDLTDSNFLPCSCGFRLCLFCHKRILEADGRCPGCRQQYNSIPGGTVEVNMGGAR 350
+DLD TDS+F PC CGF +CLFCH RI DGRCPGCR+QYN++ GGA+
Sbjct: 270 ICCDDLDPTDSSFCPCPCGFHMCLFCHNRIKLEDGRCPGCRKQYNTVSAAEGVGGGGGAK 329
Query: 351 API-----LQMQLSHICNLRP 398
A + ++ +LS C++ P
Sbjct: 330 AAVGTGREMEKRLSRSCSMGP 350
>emb|CBI35016.3| unnamed protein product [Vitis vinifera]
Length = 308
Score = 124 bits (312), Expect = 1e-26
Identities = 62/106 (58%), Positives = 68/106 (64%), Gaps = 10/106 (9%)
Frame = +3
Query: 30 RAWRPDDTSRPPSLPTISKQWIFPANA----------GWNHRISQQKGXXXXXXXXXXXX 179
RAWRPDD RP SLP +SKQ FP N+ W ISQ
Sbjct: 187 RAWRPDDALRPQSLPNLSKQCTFPMNSERHCHRAIPWAWKSTISQPSSCPICC------- 239
Query: 180 EDLDLTDSNFLPCSCGFRLCLFCHKRILEADGRCPGCRQQYNSIPG 317
EDLDLTDS+FLPC+CGFRLCLFCHKRILEADGRCPGCR+QY+ I G
Sbjct: 240 EDLDLTDSSFLPCTCGFRLCLFCHKRILEADGRCPGCRKQYDPIHG 285
>ref|XP_002281744.1| PREDICTED: uncharacterized protein LOC100261085 [Vitis vinifera]
Length = 332
Score = 124 bits (312), Expect = 1e-26
Identities = 62/106 (58%), Positives = 68/106 (64%), Gaps = 10/106 (9%)
Frame = +3
Query: 30 RAWRPDDTSRPPSLPTISKQWIFPANA----------GWNHRISQQKGXXXXXXXXXXXX 179
RAWRPDD RP SLP +SKQ FP N+ W ISQ
Sbjct: 211 RAWRPDDALRPQSLPNLSKQCTFPMNSERHCHRAIPWAWKSTISQPSSCPICC------- 263
Query: 180 EDLDLTDSNFLPCSCGFRLCLFCHKRILEADGRCPGCRQQYNSIPG 317
EDLDLTDS+FLPC+CGFRLCLFCHKRILEADGRCPGCR+QY+ I G
Sbjct: 264 EDLDLTDSSFLPCTCGFRLCLFCHKRILEADGRCPGCRKQYDPIHG 309
>ref|XP_006829471.1| hypothetical protein AMTR_s00074p00034110 [Amborella trichopoda]
gi|548834955|gb|ERM96887.1| hypothetical protein
AMTR_s00074p00034110 [Amborella trichopoda]
Length = 280
Score = 120 bits (301), Expect = 2e-25
Identities = 59/105 (56%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Frame = +3
Query: 3 KPEPIH---NTKRAWRPDDTSRPPSLPTISKQWIFPANAGWN--HRISQQKGXXXXXXXX 167
KP+P H T RAWRPDD SRP SLPT+SKQ FP N + H
Sbjct: 153 KPKPSHFENRTARAWRPDDASRPISLPTLSKQRSFPMNLDRHCLHGSMNWASSHSTPSSC 212
Query: 168 XXXXEDLDLTDSNFLPCSCGFRLCLFCHKRILEADGRCPGCRQQY 302
E+LD+TD++F PC+CGFRLCLFCHKRILEADGRCPGCR+ Y
Sbjct: 213 PICYEELDVTDTSFFPCACGFRLCLFCHKRILEADGRCPGCRKHY 257
>ref|XP_004302381.1| PREDICTED: eukaryotic initiation factor 4A-3-like [Fragaria vesca
subsp. vesca]
Length = 695
Score = 117 bits (293), Expect = 2e-24
Identities = 58/106 (54%), Positives = 69/106 (65%), Gaps = 4/106 (3%)
Frame = +3
Query: 6 PEPIHNTKRAWRPDDTSRPPSLPTISKQWIFPANAGWNHRISQ----QKGXXXXXXXXXX 173
PE NT AWRP+D SRP SLP +SK+ FP + W+ +
Sbjct: 196 PESRVNTC-AWRPNDASRPQSLPNLSKEHSFPVQSDWHCGHGAIAWTWQSIVPQPSSCPI 254
Query: 174 XXEDLDLTDSNFLPCSCGFRLCLFCHKRILEADGRCPGCRQQYNSI 311
EDLD+TDS+FLPCSCGFRLCLFCHKRILEADGRCPGCR+QY+ +
Sbjct: 255 CYEDLDITDSSFLPCSCGFRLCLFCHKRILEADGRCPGCRKQYDRV 300
>gb|EMJ16683.1| hypothetical protein PRUPE_ppa006654mg [Prunus persica]
Length = 401
Score = 117 bits (293), Expect = 2e-24
Identities = 56/102 (54%), Positives = 66/102 (64%), Gaps = 4/102 (3%)
Frame = +3
Query: 24 TKRAWRPDDTSRPPSLPTISKQWIFPANAGWNHRISQ----QKGXXXXXXXXXXXXEDLD 191
T+ AWRPDD SRP SLP + KQ F + W+ + EDLD
Sbjct: 286 TRCAWRPDDASRPQSLPNVPKQHSFLVQSDWHCGHGAIAWAWQSIVPQPSSCPICYEDLD 345
Query: 192 LTDSNFLPCSCGFRLCLFCHKRILEADGRCPGCRQQYNSIPG 317
+TDS+FLPCSCGFRLCLFCHKRILEADGRCPGCR+QY+ + G
Sbjct: 346 VTDSSFLPCSCGFRLCLFCHKRILEADGRCPGCRKQYDRVNG 387
>ref|XP_006354813.1| PREDICTED: mediator of RNA polymerase II transcription subunit
1-like [Solanum tuberosum]
Length = 354
Score = 117 bits (292), Expect = 2e-24
Identities = 57/108 (52%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Frame = +3
Query: 30 RAWRPDDTSRPPSLPTISKQWIFPANAGWNHRISQQKGXXXXXXXXXXXX--EDLDLTDS 203
+AWRPDD RP SLP +SKQ+ FP N+G ++R G EDLD TD+
Sbjct: 232 QAWRPDDEFRPQSLPNLSKQYTFPMNSGRHYRGGSVWGCKSAAIPTSCPICCEDLDFTDT 291
Query: 204 NFLPCSCGFRLCLFCHKRILEADGRCPGCRQQY-NSIPGGTVEVNMGG 344
+FLPC CGFRLCLFCHK+ILE DGRCP CR+QY + GG + GG
Sbjct: 292 SFLPCPCGFRLCLFCHKKILEEDGRCPACRKQYKHDTVGGETTKDAGG 339
>ref|XP_004236157.1| PREDICTED: uncharacterized protein LOC101261009 [Solanum
lycopersicum]
Length = 348
Score = 117 bits (292), Expect = 2e-24
Identities = 62/123 (50%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Frame = +3
Query: 30 RAWRPDDTSRPPSLPTISKQWIFPANAGWNHRISQQKGXXXXXXXXXXXX--EDLDLTDS 203
RAWRPDDT RP LP +SKQ FP N+ R G EDLD TD+
Sbjct: 226 RAWRPDDTFRPSGLPNLSKQHSFPMNSERRCRRDSVWGCKTLATPTLCPICCEDLDYTDT 285
Query: 204 NFLPCSCGFRLCLFCHKRILEADGRCPGCRQQYNSIPGGTVEVNMGGARAPILQMQLSHI 383
+FLPCSCGFRLCLFCHK+ILE DGRCPGCR+QYN E + G R L ++L+
Sbjct: 286 SFLPCSCGFRLCLFCHKKILEEDGRCPGCRKQYNQ-EAVEREATIDGGR---LTIRLARS 341
Query: 384 CNL 392
C++
Sbjct: 342 CSM 344
>ref|XP_006344994.1| PREDICTED: mediator of RNA polymerase II transcription subunit
1-like isoform X2 [Solanum tuberosum]
Length = 308
Score = 115 bits (289), Expect = 5e-24
Identities = 61/123 (49%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
Frame = +3
Query: 30 RAWRPDDTSRPPSLPTISKQWIFPANAGWNHRISQQKGXXXXXXXXXXXX--EDLDLTDS 203
+AWRPDDT RP LP +SKQ FP N+ + R G EDLD TD+
Sbjct: 186 QAWRPDDTFRPSGLPNLSKQHSFPMNSERHCRRDSVWGCKTLATPTLCPICCEDLDYTDT 245
Query: 204 NFLPCSCGFRLCLFCHKRILEADGRCPGCRQQYNSIPGGTVEVNMGGARAPILQMQLSHI 383
+FLPCSCGFRLCLFCHK+ILE DGRCPGCR+QYN E + G R L ++L+
Sbjct: 246 SFLPCSCGFRLCLFCHKKILEEDGRCPGCRKQYNQ-EAVEREATIDGGR---LTIRLARS 301
Query: 384 CNL 392
C++
Sbjct: 302 CSM 304
>ref|XP_006344993.1| PREDICTED: mediator of RNA polymerase II transcription subunit
1-like isoform X1 [Solanum tuberosum]
Length = 348
Score = 115 bits (289), Expect = 5e-24
Identities = 61/123 (49%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
Frame = +3
Query: 30 RAWRPDDTSRPPSLPTISKQWIFPANAGWNHRISQQKGXXXXXXXXXXXX--EDLDLTDS 203
+AWRPDDT RP LP +SKQ FP N+ + R G EDLD TD+
Sbjct: 226 QAWRPDDTFRPSGLPNLSKQHSFPMNSERHCRRDSVWGCKTLATPTLCPICCEDLDYTDT 285
Query: 204 NFLPCSCGFRLCLFCHKRILEADGRCPGCRQQYNSIPGGTVEVNMGGARAPILQMQLSHI 383
+FLPCSCGFRLCLFCHK+ILE DGRCPGCR+QYN E + G R L ++L+
Sbjct: 286 SFLPCSCGFRLCLFCHKKILEEDGRCPGCRKQYNQ-EAVEREATIDGGR---LTIRLARS 341
Query: 384 CNL 392
C++
Sbjct: 342 CSM 344