BLASTX nr result
ID: Zingiber24_contig00030241
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00030241
(259 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 59 7e-07
emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera] 59 7e-07
gb|ACI14439.1| Os01g67210-like protein [Aegilops speltoides] 58 2e-06
ref|XP_002300357.2| hypothetical protein POPTR_0001s37250g [Popu... 57 2e-06
ref|XP_002514778.1| pentatricopeptide repeat-containing protein,... 57 2e-06
gb|EMS56270.1| hypothetical protein TRIUR3_02952 [Triticum urartu] 57 3e-06
ref|XP_006472252.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_006472251.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
gb|EMT33347.1| hypothetical protein F775_20296 [Aegilops tauschii] 57 3e-06
gb|ACI14438.1| Os01g67210-like protein [Triticum urartu] 57 3e-06
gb|ACI14437.1| Os01g67210-like protein [Triticum monococcum] 57 3e-06
gb|EMJ06208.1| hypothetical protein PRUPE_ppa003637mg [Prunus pe... 56 6e-06
dbj|BAJ85493.1| predicted protein [Hordeum vulgare subsp. vulgare] 56 6e-06
ref|XP_006433585.1| hypothetical protein CICLE_v10004046mg, part... 55 8e-06
ref|XP_006858815.1| hypothetical protein AMTR_s00066p00170330 [A... 55 8e-06
gb|EOY28352.1| Pentatricopeptide repeat-containing protein, puta... 55 8e-06
gb|EOY28351.1| Pentatricopeptide repeat-containing protein, puta... 55 8e-06
ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containi... 55 8e-06
ref|XP_003564838.1| PREDICTED: pentatricopeptide repeat-containi... 55 8e-06
>ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g02650, mitochondrial-like [Vitis vinifera]
Length = 509
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELEEEAKS 117
DW+TAEKLLEEMK++GL LN TR LI AVKELEEE ++
Sbjct: 463 DWQTAEKLLEEMKQNGLHLNGITRGLIRAVKELEEEGRA 501
>emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]
Length = 549
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELEEEAKS 117
DW+TAEKLLEEMK++GL LN TR LI AVKELEEE ++
Sbjct: 503 DWQTAEKLLEEMKQNGLHLNGITRGLIRAVKELEEEGRA 541
>gb|ACI14439.1| Os01g67210-like protein [Aegilops speltoides]
Length = 358
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/42 (73%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELE-EEAKSES 123
DWRTAEKLLEEM+ SGL+L TRSLI AVKELE EEA +S
Sbjct: 314 DWRTAEKLLEEMEGSGLYLKGLTRSLIAAVKELEMEEASKDS 355
>ref|XP_002300357.2| hypothetical protein POPTR_0001s37250g [Populus trichocarpa]
gi|550349076|gb|EEE85162.2| hypothetical protein
POPTR_0001s37250g [Populus trichocarpa]
Length = 584
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELEEEAKSESV 126
DW TAEKL EMKE GL+LN TRSLI AVKELE+E ++ +
Sbjct: 531 DWGTAEKLFAEMKEKGLYLNSITRSLITAVKELEQEGLAKEI 572
>ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545829|gb|EEF47332.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 584
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELEEEAKSESVGDE 135
DW AEKLLE+MKE GL LN TR LI AVKELE+E + VG E
Sbjct: 539 DWERAEKLLEKMKEDGLHLNGITRGLIRAVKELEDEGIEKEVGAE 583
>gb|EMS56270.1| hypothetical protein TRIUR3_02952 [Triticum urartu]
Length = 282
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELEEEAKSE 120
DWRTAEKLLEEM+ SGL+L TRSLI AVKELE E S+
Sbjct: 238 DWRTAEKLLEEMEGSGLYLKGITRSLIAAVKELEMEEMSK 277
>ref|XP_006472252.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 489
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELEEEA 111
DWRTAEKLLE+MK GL LN TR+LI AVKELEE+A
Sbjct: 443 DWRTAEKLLEDMKLKGLHLNGITRALIRAVKELEEDA 479
>ref|XP_006472251.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 570
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELEEEA 111
DWRTAEKLLE+MK GL LN TR+LI AVKELEE+A
Sbjct: 524 DWRTAEKLLEDMKLKGLHLNGITRALIRAVKELEEDA 560
>gb|EMT33347.1| hypothetical protein F775_20296 [Aegilops tauschii]
Length = 423
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELEEE 108
DWRTAEKLLEEM+ SGL+L TRSLI+AVKELE E
Sbjct: 379 DWRTAEKLLEEMEGSGLYLKGITRSLIVAVKELEME 414
>gb|ACI14438.1| Os01g67210-like protein [Triticum urartu]
Length = 358
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELEEEAKSE 120
DWRTAEKLLEEM+ SGL+L TRSLI AVKELE E S+
Sbjct: 314 DWRTAEKLLEEMEGSGLYLKGITRSLIAAVKELEMEEVSK 353
>gb|ACI14437.1| Os01g67210-like protein [Triticum monococcum]
Length = 358
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELEEEAKSE 120
DWRTAEKLLEEM+ SGL+L TRSLI AVKELE E S+
Sbjct: 314 DWRTAEKLLEEMEGSGLYLKGITRSLIAAVKELEMEEVSK 353
>gb|EMJ06208.1| hypothetical protein PRUPE_ppa003637mg [Prunus persica]
Length = 560
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELEEE 108
DW TAEKLLEEMK++GL LN TR LI AVKEL+EE
Sbjct: 514 DWETAEKLLEEMKDNGLHLNGITRGLIKAVKELKEE 549
>dbj|BAJ85493.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 567
Score = 55.8 bits (133), Expect = 6e-06
Identities = 31/42 (73%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELE-EEAKSES 123
DWRTAEKLLEEM+ SGL L TRSLI AVKELE EEA +S
Sbjct: 523 DWRTAEKLLEEMEGSGLCLKGITRSLIAAVKELEMEEASKDS 564
>ref|XP_006433585.1| hypothetical protein CICLE_v10004046mg, partial [Citrus clementina]
gi|557535707|gb|ESR46825.1| hypothetical protein
CICLE_v10004046mg, partial [Citrus clementina]
Length = 578
Score = 55.5 bits (132), Expect = 8e-06
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELEEEA 111
DWRTAEKLLE+M+ GL LN TR+LI AVKELEE+A
Sbjct: 535 DWRTAEKLLEDMRLKGLHLNGITRALIRAVKELEEDA 571
>ref|XP_006858815.1| hypothetical protein AMTR_s00066p00170330 [Amborella trichopoda]
gi|548862926|gb|ERN20282.1| hypothetical protein
AMTR_s00066p00170330 [Amborella trichopoda]
Length = 626
Score = 55.5 bits (132), Expect = 8e-06
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELEEE 108
DWRTA+KLLEEM ++GL+ N TRSLI AVKELEEE
Sbjct: 574 DWRTAQKLLEEMTKAGLYPNAITRSLISAVKELEEE 609
>gb|EOY28352.1| Pentatricopeptide repeat-containing protein, putative isoform 2
[Theobroma cacao]
Length = 472
Score = 55.5 bits (132), Expect = 8e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELEEE 108
DW+TAEKLL+EMKE+GL+LN T+ LI AVKELE E
Sbjct: 425 DWQTAEKLLDEMKENGLYLNGITQGLIKAVKELEAE 460
>gb|EOY28351.1| Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao]
Length = 569
Score = 55.5 bits (132), Expect = 8e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELEEE 108
DW+TAEKLL+EMKE+GL+LN T+ LI AVKELE E
Sbjct: 522 DWQTAEKLLDEMKENGLYLNGITQGLIKAVKELEAE 557
>ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like [Cucumis sativus]
gi|449477884|ref|XP_004155152.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like [Cucumis sativus]
Length = 479
Score = 55.5 bits (132), Expect = 8e-06
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELEEE 108
DWRT+E+L EEMKE+GL LN TR LI AV+ELEEE
Sbjct: 433 DWRTSERLFEEMKENGLHLNGITRGLIRAVRELEEE 468
>ref|XP_003564838.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like isoform 1 [Brachypodium distachyon]
gi|357126326|ref|XP_003564839.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like isoform 2 [Brachypodium distachyon]
Length = 552
Score = 55.5 bits (132), Expect = 8e-06
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = +1
Query: 1 DWRTAEKLLEEMKESGLFLNDATRSLILAVKELEEEAKSE 120
DWRTAEKLLEEM+ SGL L TRSL+ AVKELE E S+
Sbjct: 508 DWRTAEKLLEEMESSGLCLKGITRSLVAAVKELEMEEMSK 547