BLASTX nr result
ID: Zingiber24_contig00030093
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00030093
(296 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003552730.1| PREDICTED: pentatricopeptide repeat-containi... 119 3e-25
ref|XP_003538531.1| PREDICTED: pentatricopeptide repeat-containi... 116 4e-24
gb|ESW35794.1| hypothetical protein PHAVU_001G265200g [Phaseolus... 114 1e-23
ref|XP_002268109.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
emb|CAN80932.1| hypothetical protein VITISV_017362 [Vitis vinifera] 114 1e-23
gb|EMJ24063.1| hypothetical protein PRUPE_ppa004279mg [Prunus pe... 113 2e-23
ref|XP_006855721.1| hypothetical protein AMTR_s00044p00151840 [A... 112 4e-23
gb|EOY05094.1| Pentatricopeptide repeat-containing protein, puta... 110 2e-22
ref|XP_004298231.1| PREDICTED: pentatricopeptide repeat-containi... 108 1e-21
ref|XP_002321108.2| hypothetical protein POPTR_0014s14700g [Popu... 107 1e-21
ref|XP_006421046.1| hypothetical protein CICLE_v10004784mg [Citr... 106 4e-21
gb|EXC14264.1| hypothetical protein L484_021763 [Morus notabilis] 104 1e-20
ref|XP_006414780.1| hypothetical protein EUTSA_v10027442mg [Eutr... 103 2e-20
ref|XP_002516403.1| pentatricopeptide repeat-containing protein,... 103 3e-20
ref|XP_002868305.1| binding protein [Arabidopsis lyrata subsp. l... 101 1e-19
ref|NP_193155.4| pentatricopeptide repeat-containing protein [Ar... 101 1e-19
emb|CAB10198.1| salt-inducible protein homolog [Arabidopsis thal... 101 1e-19
ref|XP_006283572.1| hypothetical protein CARUB_v10004636mg [Caps... 98 1e-18
ref|XP_004985997.1| PREDICTED: pentatricopeptide repeat-containi... 70 4e-10
ref|XP_006492991.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
>ref|XP_003552730.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
chloroplastic-like [Glycine max]
Length = 509
Score = 119 bits (299), Expect = 3e-25
Identities = 55/97 (56%), Positives = 75/97 (77%)
Frame = -3
Query: 291 AYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLNL 112
AYG F +YDEM +CVK+MEL GC PD +TYNILI EYAR+GLL++ME Y+ + SK +++
Sbjct: 216 AYGKFQMYDEMGECVKKMELEGCSPDHITYNILIQEYARAGLLQRMEKLYQRMVSKRMHV 275
Query: 111 QASTLVSMLEAYAEMGNLEKIERVYRRILKLKAYIKE 1
Q+STLV+MLEAY G +EK+E YR+IL K +++
Sbjct: 276 QSSTLVAMLEAYTTFGMVEKMENFYRKILSSKTCLED 312
>ref|XP_003538531.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
chloroplastic-like isoform X1 [Glycine max]
Length = 506
Score = 116 bits (290), Expect = 4e-24
Identities = 54/97 (55%), Positives = 74/97 (76%)
Frame = -3
Query: 291 AYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLNL 112
AYG F +YDEM +CVK+MEL GC PD +TYNILI EYA GLL++ME Y+ + SK +++
Sbjct: 214 AYGKFQMYDEMGECVKKMELEGCSPDPITYNILIQEYAGGGLLQRMEKLYQRMLSKRMHV 273
Query: 111 QASTLVSMLEAYAEMGNLEKIERVYRRILKLKAYIKE 1
++STLV+MLEAY G +EK+E+ YR+IL K I++
Sbjct: 274 KSSTLVAMLEAYTTFGMVEKMEKFYRKILNSKTCIED 310
>gb|ESW35794.1| hypothetical protein PHAVU_001G265200g [Phaseolus vulgaris]
Length = 496
Score = 114 bits (285), Expect = 1e-23
Identities = 52/97 (53%), Positives = 74/97 (76%)
Frame = -3
Query: 291 AYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLNL 112
AYG F LYDEM +CVK+MEL GC PD +TYNILI EYAR+G+L++ME Y+ + SK + L
Sbjct: 215 AYGKFQLYDEMGECVKKMELEGCSPDHITYNILIQEYARAGILQRMEKLYQRMLSKRMRL 274
Query: 111 QASTLVSMLEAYAEMGNLEKIERVYRRILKLKAYIKE 1
Q+ST V+ML+AY G +EK+E +R++L K+ +++
Sbjct: 275 QSSTFVAMLKAYTTFGIVEKMEFFFRKVLNSKSCLED 311
>ref|XP_002268109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
chloroplastic-like [Vitis vinifera]
Length = 581
Score = 114 bits (285), Expect = 1e-23
Identities = 50/98 (51%), Positives = 73/98 (74%)
Frame = -3
Query: 294 RAYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLN 115
++YG + +YDE+ +CVK+ME GC PD +TYN+LI E++R GLL++ME ++ + SK +
Sbjct: 243 QSYGKYKMYDELDECVKKMESDGCLPDHITYNLLIQEFSRGGLLKRMERVFQTVLSKKMG 302
Query: 114 LQASTLVSMLEAYAEMGNLEKIERVYRRILKLKAYIKE 1
LQ+STLV MLEAYA G +EK+E YRR+L K +K+
Sbjct: 303 LQSSTLVVMLEAYANFGIIEKMENAYRRVLNSKTSLKD 340
>emb|CAN80932.1| hypothetical protein VITISV_017362 [Vitis vinifera]
Length = 1697
Score = 114 bits (285), Expect = 1e-23
Identities = 50/98 (51%), Positives = 73/98 (74%)
Frame = -3
Query: 294 RAYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLN 115
++YG + +YDE+ +CVK+ME GC PD +TYN+LI E++R GLL++ME ++ + SK +
Sbjct: 1482 QSYGKYKMYDELDECVKKMESDGCLPDHITYNLLIQEFSRGGLLKRMERVFQTVLSKKMG 1541
Query: 114 LQASTLVSMLEAYAEMGNLEKIERVYRRILKLKAYIKE 1
LQ+STLV MLEAYA G +EK+E YRR+L K +K+
Sbjct: 1542 LQSSTLVVMLEAYANFGIIEKMENAYRRVLNSKTSLKD 1579
>gb|EMJ24063.1| hypothetical protein PRUPE_ppa004279mg [Prunus persica]
Length = 518
Score = 113 bits (283), Expect = 2e-23
Identities = 50/96 (52%), Positives = 74/96 (77%)
Frame = -3
Query: 291 AYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLNL 112
AYG + +YD++ CVK+M+L+GC PD +TYN+LI E+AR GLL++MES Y+ + S+ + L
Sbjct: 226 AYGKYRMYDQIGMCVKKMKLNGCSPDHITYNLLIREFARGGLLKRMESVYQSMLSRRMAL 285
Query: 111 QASTLVSMLEAYAEMGNLEKIERVYRRILKLKAYIK 4
Q+STL++M+E YA+ G LEK+E VYRR+L +K
Sbjct: 286 QSSTLIAMVEVYAKFGILEKMENVYRRVLNSGTVVK 321
>ref|XP_006855721.1| hypothetical protein AMTR_s00044p00151840 [Amborella trichopoda]
gi|548859508|gb|ERN17188.1| hypothetical protein
AMTR_s00044p00151840 [Amborella trichopoda]
Length = 506
Score = 112 bits (281), Expect = 4e-23
Identities = 55/98 (56%), Positives = 72/98 (73%)
Frame = -3
Query: 294 RAYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLN 115
RAYG +YD+M+KC K+ME G PD +TYNILI E+AR GL+ +ME YR L SK +
Sbjct: 218 RAYGNHRMYDDMAKCAKKMESEGFTPDHLTYNILIREFARGGLMVRMEGAYRTLLSKKMG 277
Query: 114 LQASTLVSMLEAYAEMGNLEKIERVYRRILKLKAYIKE 1
LQ STLV+MLEAYA +G + ++E V+RR+LK K +KE
Sbjct: 278 LQYSTLVAMLEAYAALGCVNEMETVFRRLLKSKIPLKE 315
>gb|EOY05094.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 504
Score = 110 bits (275), Expect = 2e-22
Identities = 49/89 (55%), Positives = 70/89 (78%)
Frame = -3
Query: 291 AYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLNL 112
AYG + +YDE+ C+K MEL C PD TYN+LI E++R GLL++ME Y++L SK +NL
Sbjct: 217 AYGKYKMYDEIGTCLKMMELDRCRPDHFTYNLLIREFSRGGLLQRMEQVYQILLSKQMNL 276
Query: 111 QASTLVSMLEAYAEMGNLEKIERVYRRIL 25
Q+S+LV+MLEAYA G L+K+E+VYR+++
Sbjct: 277 QSSSLVAMLEAYANFGILDKMEKVYRKVV 305
>ref|XP_004298231.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 509
Score = 108 bits (269), Expect = 1e-21
Identities = 48/97 (49%), Positives = 71/97 (73%)
Frame = -3
Query: 291 AYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLNL 112
AYG + +YDEM C+K+M L+GC PD +TYN+LI E+A GLL ++E Y+ + S+ ++L
Sbjct: 223 AYGKYKMYDEMGMCLKKMRLNGCSPDYITYNLLIREFAHGGLLNRVERVYQSMVSRRMDL 282
Query: 111 QASTLVSMLEAYAEMGNLEKIERVYRRILKLKAYIKE 1
Q TL+++LE YA+ G LEK+E YRR+L +A +KE
Sbjct: 283 QVPTLIAILEVYAKFGILEKMEVFYRRVLNSRAILKE 319
>ref|XP_002321108.2| hypothetical protein POPTR_0014s14700g [Populus trichocarpa]
gi|550324215|gb|EEE99423.2| hypothetical protein
POPTR_0014s14700g [Populus trichocarpa]
Length = 508
Score = 107 bits (268), Expect = 1e-21
Identities = 49/97 (50%), Positives = 70/97 (72%)
Frame = -3
Query: 291 AYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLNL 112
AYG + +YDEM+ C+K+MEL GC PD TYN+LI ++A+ GLL +ME Y+ + +K + L
Sbjct: 223 AYGTYRMYDEMAMCLKKMELDGCSPDRYTYNLLIQKFAQGGLLTRMERVYQSMRTKRMKL 282
Query: 111 QASTLVSMLEAYAEMGNLEKIERVYRRILKLKAYIKE 1
Q+STL+SMLEAYA G +EK+E++ R K +KE
Sbjct: 283 QSSTLISMLEAYANFGIVEKMEKILRWAWNSKITVKE 319
>ref|XP_006421046.1| hypothetical protein CICLE_v10004784mg [Citrus clementina]
gi|557522919|gb|ESR34286.1| hypothetical protein
CICLE_v10004784mg [Citrus clementina]
Length = 510
Score = 106 bits (264), Expect = 4e-21
Identities = 45/98 (45%), Positives = 75/98 (76%)
Frame = -3
Query: 294 RAYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLN 115
+AYG + +YDE+ C+K M+L GC PD +TYN+LI E+A +GLL++ME TY+ + +K ++
Sbjct: 217 QAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEGTYKSMLTKRMH 276
Query: 114 LQASTLVSMLEAYAEMGNLEKIERVYRRILKLKAYIKE 1
L++ST+V++L+AY G L+K+E+ Y+R+L + +KE
Sbjct: 277 LRSSTMVAILDAYMNFGMLDKMEKFYKRLLNSRTPLKE 314
>gb|EXC14264.1| hypothetical protein L484_021763 [Morus notabilis]
Length = 664
Score = 104 bits (260), Expect = 1e-20
Identities = 47/97 (48%), Positives = 71/97 (73%)
Frame = -3
Query: 291 AYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLNL 112
AY + +YDE+ C+K+M+L+GC PD +TYN+L+ ++++ GLL++MES Y + SK + L
Sbjct: 218 AYAKYEMYDEIGLCLKKMKLNGCPPDHITYNLLMRKFSKGGLLKRMESVYHTMISKRMYL 277
Query: 111 QASTLVSMLEAYAEMGNLEKIERVYRRILKLKAYIKE 1
Q+STLV+MLE YA G L+K+E+ Y R LK K + E
Sbjct: 278 QSSTLVAMLETYARFGILDKMEKFYMRTLKTKTPLGE 314
>ref|XP_006414780.1| hypothetical protein EUTSA_v10027442mg [Eutrema salsugineum]
gi|557115950|gb|ESQ56233.1| hypothetical protein
EUTSA_v10027442mg [Eutrema salsugineum]
Length = 495
Score = 103 bits (258), Expect = 2e-20
Identities = 50/97 (51%), Positives = 68/97 (70%)
Frame = -3
Query: 291 AYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLNL 112
AYG + LYDE+ C+K+ME GC D VTYN+LI E+AR GLL++ME Y+ L S+ + L
Sbjct: 210 AYGKWKLYDEIVLCIKKMESDGCVRDHVTYNLLIREFARGGLLKRMEQMYQSLMSRKMTL 269
Query: 111 QASTLVSMLEAYAEMGNLEKIERVYRRILKLKAYIKE 1
+ TL+SMLEAYAE G LEK+E Y +I++ + E
Sbjct: 270 EPCTLLSMLEAYAEFGVLEKMEDTYNKIVRFGISLDE 306
>ref|XP_002516403.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223544501|gb|EEF46020.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 502
Score = 103 bits (256), Expect = 3e-20
Identities = 47/98 (47%), Positives = 68/98 (69%)
Frame = -3
Query: 294 RAYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLN 115
+AYG + +YDEM C+K+ME+ GC PD VTYN+LI E A +GLL +ME Y+ ++
Sbjct: 211 QAYGKYKMYDEMGMCLKKMEMEGCSPDHVTYNLLIQELAEAGLLTRMEKVYQTTRMNRMD 270
Query: 114 LQASTLVSMLEAYAEMGNLEKIERVYRRILKLKAYIKE 1
L+++TL +MLEAYA G +EK+E + +R KA +KE
Sbjct: 271 LKSTTLTAMLEAYANFGIVEKMELILKRTRNSKALLKE 308
>ref|XP_002868305.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297314141|gb|EFH44564.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 502
Score = 101 bits (251), Expect = 1e-19
Identities = 48/97 (49%), Positives = 68/97 (70%)
Frame = -3
Query: 291 AYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLNL 112
AYG + +YDE+ C+KRME GC D VTYN+LI E++R GLL++ME Y+ L S+ + L
Sbjct: 212 AYGKWKMYDEIVLCLKRMESEGCVRDHVTYNLLIREFSRGGLLKRMEQMYQSLMSRKMTL 271
Query: 111 QASTLVSMLEAYAEMGNLEKIERVYRRILKLKAYIKE 1
+ STL+SMLEAYAE G +EK+E +I++ + E
Sbjct: 272 EPSTLLSMLEAYAEFGLIEKMEETCNKIIRFGISLDE 308
>ref|NP_193155.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635638|sp|O23278.2|PP310_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g14190, chloroplastic; Flags: Precursor
gi|332657991|gb|AEE83391.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 501
Score = 101 bits (251), Expect = 1e-19
Identities = 48/97 (49%), Positives = 68/97 (70%)
Frame = -3
Query: 291 AYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLNL 112
AYG + +YDE+ C+KRME GC D VTYN+LI E++R GLL++ME Y+ L S+ + L
Sbjct: 211 AYGKWKMYDEIVLCLKRMESDGCVRDHVTYNLLIREFSRGGLLKRMEQMYQSLMSRKMTL 270
Query: 111 QASTLVSMLEAYAEMGNLEKIERVYRRILKLKAYIKE 1
+ STL+SMLEAYAE G +EK+E +I++ + E
Sbjct: 271 EPSTLLSMLEAYAEFGLIEKMEETCNKIIRFGISLDE 307
>emb|CAB10198.1| salt-inducible protein homolog [Arabidopsis thaliana]
gi|7268124|emb|CAB78461.1| salt-inducible protein
homolog [Arabidopsis thaliana]
Length = 561
Score = 101 bits (251), Expect = 1e-19
Identities = 48/97 (49%), Positives = 68/97 (70%)
Frame = -3
Query: 291 AYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLNL 112
AYG + +YDE+ C+KRME GC D VTYN+LI E++R GLL++ME Y+ L S+ + L
Sbjct: 271 AYGKWKMYDEIVLCLKRMESDGCVRDHVTYNLLIREFSRGGLLKRMEQMYQSLMSRKMTL 330
Query: 111 QASTLVSMLEAYAEMGNLEKIERVYRRILKLKAYIKE 1
+ STL+SMLEAYAE G +EK+E +I++ + E
Sbjct: 331 EPSTLLSMLEAYAEFGLIEKMEETCNKIIRFGISLDE 367
>ref|XP_006283572.1| hypothetical protein CARUB_v10004636mg [Capsella rubella]
gi|482552277|gb|EOA16470.1| hypothetical protein
CARUB_v10004636mg [Capsella rubella]
Length = 501
Score = 97.8 bits (242), Expect = 1e-18
Identities = 45/90 (50%), Positives = 65/90 (72%)
Frame = -3
Query: 291 AYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLNL 112
AYG + +YDE+ CV+RME GC D VTYN+LI +++R GLL++ME Y+ L S+ + L
Sbjct: 218 AYGKWKMYDEIVLCVRRMESDGCVRDHVTYNLLIRQFSRGGLLKRMEQMYQSLMSRKMTL 277
Query: 111 QASTLVSMLEAYAEMGNLEKIERVYRRILK 22
+ TL+SMLEAYAE G +EK+E +I++
Sbjct: 278 EPCTLLSMLEAYAEFGVIEKMEETCNKIIR 307
>ref|XP_004985997.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Setaria italica]
Length = 481
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/92 (36%), Positives = 55/92 (59%)
Frame = -3
Query: 291 AYGCFGLYDEMSKCVKRMELSGCFPDEVTYNILITEYARSGLLEKMESTYRVLSSKNLNL 112
AYG +G DEM K EL G PD T+NI+I Y ++G+ +KM S ++ + + +L
Sbjct: 272 AYGNYGRTDEMEKWYSEFELMGVEPDTKTFNIMIKSYGKAGMYDKMMSIFKYMKKRFFSL 331
Query: 111 QASTLVSMLEAYAEMGNLEKIERVYRRILKLK 16
A T ++E + GN+EK+E Y R++K++
Sbjct: 332 TAVTFNIVIECFGRAGNIEKME-YYFRLMKIQ 362
>ref|XP_006492991.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
chloroplastic-like [Citrus sinensis]
Length = 477
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/98 (35%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Frame = -3
Query: 288 YGCFGLYDEMSKCVKRMELSGCFPDEVTYNILIT--EYARSGLLEKMESTYRVLSSKNLN 115
Y G ++E + M+ P TY+ LI E+A +GLL++ME TY+ + +K ++
Sbjct: 184 YSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYEFACAGLLKRMEGTYKSMLTKRMH 243
Query: 114 LQASTLVSMLEAYAEMGNLEKIERVYRRILKLKAYIKE 1
L++ST+V++L+AY G L+K+E+ Y+R+L + +KE
Sbjct: 244 LRSSTMVAILDAYMNFGMLDKMEKFYKRLLNSRTPLKE 281