BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00029990
         (619 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006664566.1| PREDICTED: pentatricopeptide repeat-containi...   173   3e-41
gb|EEC69305.1| hypothetical protein OsI_38371 [Oryza sativa Indi...   173   3e-41
gb|ABA98288.2| pentatricopeptide, putative [Oryza sativa Japonic...   173   3e-41
ref|XP_002442156.1| hypothetical protein SORBIDRAFT_08g015260 [S...   166   4e-39
ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containi...   166   6e-39
ref|NP_001176959.1| Os12g0490100 [Oryza sativa Japonica Group] g...   162   7e-38
tpg|DAA55420.1| TPA: hypothetical protein ZEAMMB73_457942 [Zea m...   159   4e-37
gb|EMT19719.1| hypothetical protein F775_03918 [Aegilops tauschii]    158   1e-36
ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containi...   151   2e-34
ref|XP_004295870.1| PREDICTED: pentatricopeptide repeat-containi...   150   3e-34
ref|XP_004306131.1| PREDICTED: pentatricopeptide repeat-containi...   150   4e-34
gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]        149   8e-34
ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea ma...   149   8e-34
ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [S...   148   1e-33
gb|EMJ16874.1| hypothetical protein PRUPE_ppa003946mg [Prunus pe...   147   2e-33
ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containi...   147   2e-33
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi...   147   2e-33
ref|XP_002311462.1| pentatricopeptide repeat-containing family p...   147   2e-33
ref|XP_004239417.1| PREDICTED: pentatricopeptide repeat-containi...   146   5e-33
gb|EOX94498.1| Basic helix-loop-helix DNA-binding superfamily pr...   145   9e-33

>ref|XP_006664566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Oryza brachyantha]
          Length = 656

 Score =  173 bits (439), Expect = 3e-41
 Identities = 85/205 (41%), Positives = 129/205 (62%)
 Frame = +3

Query: 3   SYSNYRSEVTREAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGH 182
           S S+    V  EA++++ +M + G  PN FT++SV+K CS L+AV EG QVH    K G 
Sbjct: 74  SSSSSSPAVAAEAVVLFGLMLRSGPRPNAFTVTSVVKCCSKLRAVHEGLQVHGFLAKAGV 133

Query: 183 NSSMYVQATLADMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDK 362
            SS++V A L D+Y  +G + +A R+     + N+V+ NTM++   + GD+ AARE+FD 
Sbjct: 134 GSSVHVGAALLDLYGNIGYVGDARRVFDEMPQRNIVVENTMVACNVRAGDLAAAREVFDG 193

Query: 363 MSHKDSVSWNVMISGYAGIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSLF 542
           M+ KD +SWN ++SGY   GD + AR LFD+M  R ++SWN ++A    +G W + + +F
Sbjct: 194 MTEKDPISWNTLMSGYLHTGDAAAARGLFDEMPLRNLNSWNIMIAACSEEGLWVDAVMVF 253

Query: 543 KEMNLRNIKPNHVSMAMLMSACGHL 617
             M +   KP+  +MA+LMSAC  L
Sbjct: 254 NRMRVIGFKPDAATMAVLMSACAQL 278



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 8/199 (4%)
 Frame = +3

Query: 36  EAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMYVQATLA 215
           +A++++  M   G  P+  T++ ++ AC+ L ++    QVH    K     + +VQ +L 
Sbjct: 248 DAVMVFNRMRVIGFKPDAATMAVLMSACAQLGSLAVAGQVHGLLQKCYVEMNCHVQNSLI 307

Query: 216 DMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKM----SHKDSV 383
           DMY + G I +A  L   +   + V  N MI+ +   G    A ELF+ M       D++
Sbjct: 308 DMYAKCGSISQAQFLFNETYPKDAVSYNVMITAFAHHGHARDALELFNLMVDVGLQPDAI 367

Query: 384 SWNVMISGYAGIGDTSTARKLFDQMTER----EISSWNALMAGYCRDGGWYEVMSLFKEM 551
           ++  ++S  A  G     +  F+ M       + S   A M       G  E    F  +
Sbjct: 368 TFLGVLSACAHAGLVDNGKHYFESMRTTYAVPQSSDHYACMVDLYGRAGLIEEAHYF--V 425

Query: 552 NLRNIKPNHVSMAMLMSAC 608
               +KP+      L+SAC
Sbjct: 426 KTMTVKPHAGVWGALLSAC 444


>gb|EEC69305.1| hypothetical protein OsI_38371 [Oryza sativa Indica Group]
          Length = 560

 Score =  173 bits (439), Expect = 3e-41
 Identities = 87/206 (42%), Positives = 131/206 (63%), Gaps = 1/206 (0%)
 Frame = +3

Query: 3   SYSNYRSEVTREAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGH 182
           S S++  EV  EA+ ++ +M   G  PN FT++SV+K CS ++AV EG QVHA   K G 
Sbjct: 89  SSSSHALEVAGEAVALFALMLWSGPRPNAFTVTSVIKCCSKVRAVHEGLQVHAFLAKAGL 148

Query: 183 N-SSMYVQATLADMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFD 359
             SS++V A L D+Y  +G + +A R+       NVV+ NTM++   + GDM AARE+FD
Sbjct: 149 GCSSVHVGAALLDLYGNIGLVGDARRVFDEMPVKNVVVGNTMVACNVRAGDMGAAREVFD 208

Query: 360 KMSHKDSVSWNVMISGYAGIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSL 539
            M+ +D +SWN ++SGY  +GDT+T R+LFD+MT R ++SWN ++A    +G   + + +
Sbjct: 209 GMAERDPISWNTLMSGYLHLGDTATVRELFDEMTVRNVNSWNTMIAACSEEGSLADTVKV 268

Query: 540 FKEMNLRNIKPNHVSMAMLMSACGHL 617
           F  M     +P+  +MA+LMSAC  L
Sbjct: 269 FNRMRATGFEPDAATMAVLMSACAQL 294



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 9/200 (4%)
 Frame = +3

Query: 36  EAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMYVQATLA 215
           + + ++  M   G  P+  T++ ++ AC+ L ++    QVH    K     + +VQ +L 
Sbjct: 264 DTVKVFNRMRATGFEPDAATMAVLMSACAQLGSLTIAGQVHGLLQKSCVEMNCHVQNSLI 323

Query: 216 DMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKM----SHKDSV 383
           DMY + G I +A  L   +   + V  N MI  + + G    A +LF+ M       D+V
Sbjct: 324 DMYAKCGCISQAQFLFTETYPKDTVSYNVMIIAFAQHGHARDALDLFNAMVDSGLQPDAV 383

Query: 384 SWNVMISGYAGIGDTSTARKLFDQM-----TEREISSWNALMAGYCRDGGWYEVMSLFKE 548
           ++  ++S  A  G     +  F+ M      ++    +  ++  Y R G   E     K 
Sbjct: 384 TFLGVLSACAHAGLVEYGKNYFELMKTTYAVQQSPDHYACVVDLYGRAGLIEEAHCFVKT 443

Query: 549 MNLRNIKPNHVSMAMLMSAC 608
           M    +KP+      L++AC
Sbjct: 444 M---PVKPHAGVWGALLNAC 460


>gb|ABA98288.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 572

 Score =  173 bits (439), Expect = 3e-41
 Identities = 87/206 (42%), Positives = 131/206 (63%), Gaps = 1/206 (0%)
 Frame = +3

Query: 3   SYSNYRSEVTREAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGH 182
           S S++  EV  EA+ ++ +M   G  PN FT++SV+K CS ++AV EG QVHA   K G 
Sbjct: 89  SSSSHALEVAGEAVALFALMLWSGPRPNAFTVTSVIKCCSKVRAVHEGLQVHAFLAKAGL 148

Query: 183 N-SSMYVQATLADMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFD 359
             SS++V A L D+Y  +G + +A R+       NVV+ NTM++   + GDM AARE+FD
Sbjct: 149 GCSSVHVGAALLDLYGNIGLVGDARRVFDEMPVKNVVVGNTMVACNVRAGDMGAAREVFD 208

Query: 360 KMSHKDSVSWNVMISGYAGIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSL 539
            M+ +D +SWN ++SGY  +GDT+T R+LFD+MT R ++SWN ++A    +G   + + +
Sbjct: 209 GMAERDPISWNTLMSGYLHLGDTATVRELFDEMTVRNVNSWNTMIAACSEEGSLADTVKV 268

Query: 540 FKEMNLRNIKPNHVSMAMLMSACGHL 617
           F  M     +P+  +MA+LMSAC  L
Sbjct: 269 FNRMRATGFEPDAATMAVLMSACAQL 294



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 9/200 (4%)
 Frame = +3

Query: 36  EAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMYVQATLA 215
           + + ++  M   G  P+  T++ ++ AC+ L ++    QVH    K     + +VQ +L 
Sbjct: 264 DTVKVFNRMRATGFEPDAATMAVLMSACAQLGSLTIAGQVHGLLQKSCVEMNCHVQNSLI 323

Query: 216 DMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKM----SHKDSV 383
           DMY + G I +A  L   +   + V  N MI  + + G    A +LF+ M       D+V
Sbjct: 324 DMYAKCGCISQAQFLFTETYPKDTVSYNVMIIAFAQHGHARDALDLFNAMVDSGLQPDAV 383

Query: 384 SWNVMISGYAGIGDTSTARKLFDQM-----TEREISSWNALMAGYCRDGGWYEVMSLFKE 548
           ++  ++S  A  G     +  F+ M      ++    +  ++  Y R G   E     K 
Sbjct: 384 TFLGVLSACAHAGLVEYGKNYFELMKTTYAVQQSPDHYACVVDLYGRAGLIEEAHCFVKT 443

Query: 549 MNLRNIKPNHVSMAMLMSAC 608
           M    +KP+      L++AC
Sbjct: 444 M---PVKPHAGVWGALLNAC 460


>ref|XP_002442156.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
           gi|241942849|gb|EES15994.1| hypothetical protein
           SORBIDRAFT_08g015260 [Sorghum bicolor]
          Length = 557

 Score =  166 bits (421), Expect = 4e-39
 Identities = 80/194 (41%), Positives = 123/194 (63%), Gaps = 1/194 (0%)
 Frame = +3

Query: 39  AILIYRMMHQRGA-HPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMYVQATLA 215
           A+ ++R+M +RG   PN FT SSV++ CS L+AV EG QVH      G   + +V A L 
Sbjct: 100 ALALFRLMLRRGVPRPNAFTASSVVRCCSALRAVREGIQVHGFLFSAGLGRASHVGAALV 159

Query: 216 DMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKMSHKDSVSWNV 395
           DMY  +GR+ +A R+       NVVL NTM++ Y + GD+EA R++FD+M+ +D +SWN 
Sbjct: 160 DMYGSLGRVADARRVFDEMPSTNVVLGNTMVACYVRAGDVEAGRDVFDRMAERDPISWNT 219

Query: 396 MISGYAGIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSLFKEMNLRNIKPN 575
           ++ GY   G+   AR LF++M +R ++SWN ++A   ++G W + + +F  M L   +P+
Sbjct: 220 LMMGYLRQGEAGVARDLFEEMPDRNVNSWNMVIAACSQEGLWADAVEVFNRMRLARFQPD 279

Query: 576 HVSMAMLMSACGHL 617
             +MA+LMSAC  L
Sbjct: 280 PATMAVLMSACAQL 293



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 9/200 (4%)
 Frame = +3

Query: 36  EAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMYVQATLA 215
           +A+ ++  M      P+P T++ ++ AC+ L ++   +QVH    K     + +V  +L 
Sbjct: 263 DAVEVFNRMRLARFQPDPATMAVLMSACAQLGSLSIASQVHGILRKGCVEMNFHVLNSLI 322

Query: 216 DMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKMSHK----DSV 383
           DMY + G + +A  L   +   + V  N MI    + G    A ++FD+MS +    D+V
Sbjct: 323 DMYAKCGSVSQAHLLFVETRLKDTVSYNVMICALAQHGHGRDALQIFDEMSEEGLQPDAV 382

Query: 384 SWNVMISGYAGIGDTSTARKLFDQM-----TEREISSWNALMAGYCRDGGWYEVMSLFKE 548
           ++  ++S  A  G     +  F+ M      E+    +  ++  Y R G   E   L + 
Sbjct: 383 TFLGVLSACAHAGLVHDGKFYFESMRTNYAIEQSPDHYACMVDLYGRAGLIEEAYQLARA 442

Query: 549 MNLRNIKPNHVSMAMLMSAC 608
           M    +KP+      L++AC
Sbjct: 443 M---PVKPHAGVWGALINAC 459


>ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Brachypodium distachyon]
          Length = 548

 Score =  166 bits (419), Expect = 6e-39
 Identities = 85/206 (41%), Positives = 128/206 (62%), Gaps = 1/206 (0%)
 Frame = +3

Query: 3   SYSNYRSE-VTREAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLG 179
           SY+ + S  +  EA  ++  M + G  PN FT+SSVLK+ S L+A  +  QVH    K G
Sbjct: 79  SYAKHASPALAAEAFPLFMFMLRSGPRPNGFTVSSVLKSLSKLRAAHQVCQVHGFLVKAG 138

Query: 180 HNSSMYVQATLADMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFD 359
             SS++V ATL D Y  + R+++A R+       NVV+ N M+S Y K GD+EAAR++FD
Sbjct: 139 LASSLHVGATLLDSYGNLCRVKDARRVFDEMPRSNVVVGNAMVSGYVKAGDVEAARQVFD 198

Query: 360 KMSHKDSVSWNVMISGYAGIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSL 539
            M  +DS+SWN ++SGY   GD   AR LFD+M +R ++SWN +++     G W + +++
Sbjct: 199 GMVERDSISWNTLMSGYLRRGDAGLARDLFDEMPQRNVNSWNMMISACSEVGLWADSVAV 258

Query: 540 FKEMNLRNIKPNHVSMAMLMSACGHL 617
           F +M   + +P+  +MA+LMSAC  L
Sbjct: 259 FNQMRFMSFRPDAATMAVLMSACAQL 284


>ref|NP_001176959.1| Os12g0490100 [Oryza sativa Japonica Group]
           gi|255670316|dbj|BAH95687.1| Os12g0490100 [Oryza sativa
           Japonica Group]
          Length = 451

 Score =  162 bits (410), Expect = 7e-38
 Identities = 80/183 (43%), Positives = 118/183 (64%), Gaps = 1/183 (0%)
 Frame = +3

Query: 72  GAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHN-SSMYVQATLADMYTRVGRIQE 248
           G  PN FT++SV+K CS ++AV EG QVHA   K G   SS++V A L D+Y  +G + +
Sbjct: 5   GPRPNAFTVTSVIKCCSKVRAVHEGLQVHAFLAKAGLGCSSVHVGAALLDLYGNIGLVGD 64

Query: 249 ASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKMSHKDSVSWNVMISGYAGIGDT 428
           A R+       NVV+ NTM++   + GDM AARE+FD M+ +D +SWN ++SGY  +GDT
Sbjct: 65  ARRVFDEMPVKNVVVGNTMVACNVRAGDMGAAREVFDGMAERDPISWNTLMSGYLHLGDT 124

Query: 429 STARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSLFKEMNLRNIKPNHVSMAMLMSAC 608
           +T R+LFD+MT R ++SWN ++A    +G   + + +F  M     +P+  +MA+LMSAC
Sbjct: 125 ATVRELFDEMTVRNVNSWNTMIAACSEEGSLADTVKVFNRMRATGFEPDAATMAVLMSAC 184

Query: 609 GHL 617
             L
Sbjct: 185 AQL 187



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 9/200 (4%)
 Frame = +3

Query: 36  EAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMYVQATLA 215
           + + ++  M   G  P+  T++ ++ AC+ L ++    QVH    K     + +VQ +L 
Sbjct: 157 DTVKVFNRMRATGFEPDAATMAVLMSACAQLGSLTIAGQVHGLLQKSCVEMNCHVQNSLI 216

Query: 216 DMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKM----SHKDSV 383
           DMY + G I +A  L   +   + V  N MI  + + G    A +LF+ M       D+V
Sbjct: 217 DMYAKCGCISQAQFLFTETYPKDTVSYNVMIIAFAQHGHARDALDLFNAMVDSGLQPDAV 276

Query: 384 SWNVMISGYAGIGDTSTARKLFDQM-----TEREISSWNALMAGYCRDGGWYEVMSLFKE 548
           ++  ++S  A  G     +  F+ M      ++    +  ++  Y R G   E     K 
Sbjct: 277 TFLGVLSACAHAGLVEYGKNYFELMKTTYAVQQSPDHYACVVDLYGRAGLIEEAHCFVKT 336

Query: 549 MNLRNIKPNHVSMAMLMSAC 608
           M    +KP+      L++AC
Sbjct: 337 M---PVKPHAGVWGALLNAC 353


>tpg|DAA55420.1| TPA: hypothetical protein ZEAMMB73_457942 [Zea mays]
          Length = 534

 Score =  159 bits (403), Expect = 4e-37
 Identities = 78/198 (39%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
 Frame = +3

Query: 27  VTREAILIYRMMHQRGA-HPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMYVQ 203
           V   A+ ++R+M + G   PN FT SSV++ CS L+AV  G QVH      G   + +V+
Sbjct: 73  VAEGALTLFRLMLRHGVPRPNAFTASSVVRCCSALRAVRVGIQVHGFLVNAGLGRAEHVR 132

Query: 204 ATLADMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKMSHKDSV 383
           A L DMY   GR+ +A R+    S  +VVL NTM++ Y + GD+E+ R +FD+M  +D +
Sbjct: 133 AALVDMYGNHGRVADARRVFDEMSATSVVLGNTMVACYVRAGDVESGRVVFDRMVERDLI 192

Query: 384 SWNVMISGYAGIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSLFKEMNLRN 563
           SWN ++ GY   G    AR+LF++M +R ++SWN  +A Y ++  W + +++F  M L  
Sbjct: 193 SWNTLMMGYLRQGGAGVARELFEEMPDRNVNSWNMAIAAYSQERSWADAVAVFNRMRLAR 252

Query: 564 IKPNHVSMAMLMSACGHL 617
            +P+  +MA+LMSAC  L
Sbjct: 253 FQPDPATMAVLMSACAQL 270



 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 9/211 (4%)
 Frame = +3

Query: 3   SYSNYRSEVTREAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGH 182
           +YS  RS    +A+ ++  M      P+P T++ ++ AC+ L ++    QVH    K   
Sbjct: 231 AYSQERSWA--DAVAVFNRMRLARFQPDPATMAVLMSACAQLGSLSVARQVHGILRKGCV 288

Query: 183 NSSMYVQATLADMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDK 362
             + +V  +L DMY + G I +A  L   +   + V  N MI    + G    A ++FD+
Sbjct: 289 EMNFHVLNSLIDMYAKCGSISQAHLLFVETHLKDTVSYNVMICALARHGHGRDALQVFDE 348

Query: 363 MSHK----DSVSWNVMISGYAGIGDTSTARKLFDQM-----TEREISSWNALMAGYCRDG 515
           MS +    D+V+   ++S  A  G     +  F+ M      E+    +  ++  Y R G
Sbjct: 349 MSKERLQPDAVTLLGVLSACAHAGLVHDGKFYFESMKTNYAIEQSPDHYACMVDLYGRAG 408

Query: 516 GWYEVMSLFKEMNLRNIKPNHVSMAMLMSAC 608
              E   L + M +   +P+      L++AC
Sbjct: 409 LIKEAYELARAMPM---EPHAGVWGALINAC 436


>gb|EMT19719.1| hypothetical protein F775_03918 [Aegilops tauschii]
          Length = 496

 Score =  158 bits (400), Expect = 1e-36
 Identities = 80/195 (41%), Positives = 119/195 (61%), Gaps = 1/195 (0%)
 Frame = +3

Query: 36  EAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMYVQATLA 215
           EA  ++R+M + G  PN FT+SS LK+ S L+ V E  QVH    K G  SS++V + L 
Sbjct: 38  EAFALFRLMLRSGPPPNAFTVSSALKSLSALRGVREACQVHGFLVKAGLGSSVHVGSALL 97

Query: 216 DMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKMSHKDSVSWNV 395
           D Y  +GR+++A R+       NVV  N M++ Y + GD+EAA+E+FD M  +D +SWN 
Sbjct: 98  DSYGSLGRVRDARRVFDEMPARNVVAGNAMVACYARAGDVEAAQEVFDGMEERDLISWNT 157

Query: 396 MISGYAGIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSLFKEMNLRNI-KP 572
           ++SGY   GD   AR LF+QM +R + SWN ++    + G W + + +F  M L +  +P
Sbjct: 158 LMSGYLRQGDAGVARDLFEQMPQRNVHSWNMMITACSQAGLWADSVGVFNRMRLMSFQRP 217

Query: 573 NHVSMAMLMSACGHL 617
           +  +MA+LMSAC  L
Sbjct: 218 DAATMAVLMSACAQL 232


>ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Vitis vinifera]
          Length = 464

 Score =  151 bits (381), Expect = 2e-34
 Identities = 76/186 (40%), Positives = 111/186 (59%)
 Frame = +3

Query: 60  MHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMYVQATLADMYTRVGR 239
           M Q    P  FT SS++KACS +  +  G  VH H  K G +S ++VQ  L D Y   G+
Sbjct: 1   MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60

Query: 240 IQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKMSHKDSVSWNVMISGYAGI 419
           I EA R+    SE +V    TMIS + + GDM +AR+LFD+M  +++ SWN MI GY+ +
Sbjct: 61  IVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRL 120

Query: 420 GDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSLFKEMNLRNIKPNHVSMAMLM 599
            +  +A  LF QM  R+I SW  ++A Y ++  + E +++F EM    I P+ V+MA ++
Sbjct: 121 RNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATII 180

Query: 600 SACGHL 617
           SAC HL
Sbjct: 181 SACAHL 186



 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 44/201 (21%), Positives = 94/201 (46%), Gaps = 9/201 (4%)
 Frame = +3

Query: 33  REAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMYVQATL 212
           REA+ ++  M   G  P+  T+++++ AC+ L A+  G ++H ++ ++G +  +Y+ + L
Sbjct: 155 REALAVFNEMQTNGIDPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSAL 214

Query: 213 ADMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKMSHK----DS 380
            DMY + G + ++  + +   + N+   N++I      G  E A  +F +M  +    + 
Sbjct: 215 IDMYAKCGSLDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNG 274

Query: 381 VSWNVMISGYAGIGDTSTARKLFDQMTE-----REISSWNALMAGYCRDGGWYEVMSLFK 545
           V++  ++      G     RK F  M+       EI  +  ++    + G   + + L +
Sbjct: 275 VTFISVLGACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVR 334

Query: 546 EMNLRNIKPNHVSMAMLMSAC 608
            M +   +PN V    L+  C
Sbjct: 335 SMRM---EPNSVIWGALLGGC 352


>ref|XP_004295870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Fragaria vesca subsp. vesca]
          Length = 729

 Score =  150 bits (379), Expect = 3e-34
 Identities = 72/179 (40%), Positives = 113/179 (63%)
 Frame = +3

Query: 81  PNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMYVQATLADMYTRVGRIQEASRL 260
           P+ +T +SVLKAC+ L  V EG +VH   TK G   +++V+ +L DMY + G++  A +L
Sbjct: 192 PDEYTFTSVLKACAGLLRVTEGGKVHCLVTKFGCEENLFVRNSLTDMYFKFGKVGVAQKL 251

Query: 261 LWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKMSHKDSVSWNVMISGYAGIGDTSTAR 440
                  +VV  NT+++ YC  G++  AR +FD M  K S SW+ MIS YA +G+   A+
Sbjct: 252 FDEMRVRDVVSWNTLVAGYCVSGEVGEARRVFDGMVEKSSFSWSTMISAYAKLGELEEAQ 311

Query: 441 KLFDQMTEREISSWNALMAGYCRDGGWYEVMSLFKEMNLRNIKPNHVSMAMLMSACGHL 617
           +LFD + +R + SWNA++AGY ++  + E + LF+EM    + PN V++  ++SAC HL
Sbjct: 312 RLFDAVPQRNVVSWNAMIAGYAQNEKYDEAVGLFREMQECGLAPNDVTLVSVLSACAHL 370



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 38/116 (32%), Positives = 61/116 (52%)
 Frame = +3

Query: 18  RSEVTREAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMY 197
           ++E   EA+ ++R M + G  PN  T+ SVL AC+ L A+  G  +     + G +  ++
Sbjct: 334 QNEKYDEAVGLFREMQECGLAPNDVTLVSVLSACAHLGALDLGKWIDRFIKRSGMDLGLF 393

Query: 198 VQATLADMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKM 365
           +   LADMY + G I EA R+     E +V+  + +I+     G  + A E FDKM
Sbjct: 394 LGNALADMYAKCGCITEARRVFNNMQERDVISWSIIITGLAMNGHADQAFECFDKM 449


>ref|XP_004306131.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Fragaria vesca subsp. vesca]
          Length = 540

 Score =  150 bits (378), Expect = 4e-34
 Identities = 76/190 (40%), Positives = 117/190 (61%)
 Frame = +3

Query: 39  AILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMYVQATLAD 218
           A+++Y  M +RG  P+ FT   VLKAC+ L  V  G  +H    + G  S+  V+ TL D
Sbjct: 97  AVVLYTRMEKRGLRPDDFTFPFVLKACNKLCWVRMGMGIHGKVVRFGFESNASVRNTLID 156

Query: 219 MYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKMSHKDSVSWNVM 398
            + + G ++ A+ L   S+  +VV  + + + Y + G ++AAR LFD+M  KD VSWNVM
Sbjct: 157 FHAKCGDLRVATALFDGSARRDVVAWSALTAGYARRGKLDAARRLFDEMPVKDLVSWNVM 216

Query: 399 ISGYAGIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSLFKEMNLRNIKPNH 578
           I+GY   G+  +ARKLFD++  R++ +WNA++AGY R G   + + +F+EM     KP+ 
Sbjct: 217 ITGYTKQGEMESARKLFDEVPRRDVVTWNAMIAGYVRCGCVEQALQMFEEMTSLGEKPDE 276

Query: 579 VSMAMLMSAC 608
           V+M  L+SAC
Sbjct: 277 VTMLSLLSAC 286



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 40/171 (23%)
 Frame = +3

Query: 222 YTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKMSH----KDSVSW 389
           YT+ G ++ A +L       +VV  N MI+ Y + G +E A ++F++M+      D V+ 
Sbjct: 220 YTKQGEMESARKLFDEVPRRDVVTWNAMIAGYVRCGCVEQALQMFEEMTSLGEKPDEVTM 279

Query: 390 ------------------------------------NVMISGYAGIGDTSTARKLFDQMT 461
                                               N +I  Y+  G    A ++F  M 
Sbjct: 280 LSLLSACADVGELEIGKRLHSSLLELGSGEISIIHGNALIDMYSKCGSIERALEVFWGMR 339

Query: 462 EREISSWNALMAGYCRDGGWYEVMSLFKEMNLRNIKPNHVSMAMLMSACGH 614
           E+++SSWN+++ G    G   E ++LF+EM    ++P+ ++   ++ AC H
Sbjct: 340 EKDVSSWNSVIGGLAFHGHAEESVNLFEEMRRLKVRPDGITFVGVLVACSH 390



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 10/207 (4%)
 Frame = +3

Query: 18  RSEVTREAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMY 197
           R     +A+ ++  M   G  P+  T+ S+L AC+ +  +  G ++H+   +LG      
Sbjct: 253 RCGCVEQALQMFEEMTSLGEKPDEVTMLSLLSACADVGELEIGKRLHSSLLELGSGEISI 312

Query: 198 VQAT-LADMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKMS-- 368
           +    L DMY++ G I+ A  + W   E +V   N++I      G  E +  LF++M   
Sbjct: 313 IHGNALIDMYSKCGSIERALEVFWGMREKDVSSWNSVIGGLAFHGHAEESVNLFEEMRRL 372

Query: 369 --HKDSVSWNVMISGYAGIGDTSTARKLFDQM-----TEREISSWNALMAGYCRDGGWYE 527
               D +++  ++   +  G     R  F  M      E  I  +  ++    R G   E
Sbjct: 373 KVRPDGITFVGVLVACSHAGKVEDGRGYFSLMRNKYKIEPNIKHYGCMVDLLGRAGLLDE 432

Query: 528 VMSLFKEMNLRNIKPNHVSMAMLMSAC 608
                + M +   +PN +    L+ AC
Sbjct: 433 AFDCIENMEM---QPNAIVWRTLLGAC 456


>gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
          Length = 537

 Score =  149 bits (375), Expect = 8e-34
 Identities = 81/203 (39%), Positives = 119/203 (58%), Gaps = 7/203 (3%)
 Frame = +3

Query: 21  SEVTREAILIYRMMHQRGA-------HPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLG 179
           S+  R+A+ IY  M +  A        P+  T   VL+AC+ + A   G QVHAH  K G
Sbjct: 86  SDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGETGAQVHAHVVKAG 145

Query: 180 HNSSMYVQATLADMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFD 359
             S  +V+  L  M+  +G +  A+ L    + ++ V  + MIS + + GD+ AARELFD
Sbjct: 146 CESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSAMISGFARRGDIGAARELFD 205

Query: 360 KMSHKDSVSWNVMISGYAGIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSL 539
           +   KD VSWNVMI+ YA +GD + AR+LFD   +R++ SWNA+++GY R G   + M L
Sbjct: 206 ESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSRKQAMEL 265

Query: 540 FKEMNLRNIKPNHVSMAMLMSAC 608
           F++M     KP+ V+M  L+SAC
Sbjct: 266 FEQMQAMGEKPDTVTMLSLLSAC 288



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
 Frame = +3

Query: 222 YTRVGRIQEASRLLWT----SSEDNVVLCNTMISHYCKEGDMEAARELFDKMSHKDS--- 380
           Y R G  ++A  L         + + V   +++S     GD++A R L   +S + S   
Sbjct: 253 YVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFLSGRFSRIG 312

Query: 381 ---VSWNVMISGYAGIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSLFKEM 551
                 N +I  YA  G  ++A ++F  M ++ +S+WN+++ G    G   E +++F++M
Sbjct: 313 PTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAVFRKM 372

Query: 552 NLRNIKPNHVSMAMLMSACGH 614
              N+KP+ ++   +++AC H
Sbjct: 373 LQGNVKPDEITFVAVLAACSH 393


>ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
           gi|219886289|gb|ACL53519.1| unknown [Zea mays]
          Length = 537

 Score =  149 bits (375), Expect = 8e-34
 Identities = 81/203 (39%), Positives = 119/203 (58%), Gaps = 7/203 (3%)
 Frame = +3

Query: 21  SEVTREAILIYRMMHQRGA-------HPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLG 179
           S+  R+A+ IY  M +  A        P+  T   VL+AC+ + A   G QVHAH  K G
Sbjct: 86  SDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGETGAQVHAHVVKAG 145

Query: 180 HNSSMYVQATLADMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFD 359
             S  +V+  L  M+  +G +  A+ L    + ++ V  + MIS + + GD+ AARELFD
Sbjct: 146 CESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSAMISGFARRGDIGAARELFD 205

Query: 360 KMSHKDSVSWNVMISGYAGIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSL 539
           +   KD VSWNVMI+ YA +GD + AR+LFD   +R++ SWNA+++GY R G   + M L
Sbjct: 206 ESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSRKQAMEL 265

Query: 540 FKEMNLRNIKPNHVSMAMLMSAC 608
           F++M     KP+ V+M  L+SAC
Sbjct: 266 FEQMQAMGEKPDTVTMLSLLSAC 288



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
 Frame = +3

Query: 222 YTRVGRIQEASRLLWT----SSEDNVVLCNTMISHYCKEGDMEAARELFDKMSHKDS--- 380
           Y R G  ++A  L         + + V   +++S     GD++A R L   +S + S   
Sbjct: 253 YVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFLSGRFSRIG 312

Query: 381 ---VSWNVMISGYAGIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSLFKEM 551
                 N +I  YA  G  ++A ++F  M ++ +S+WN+++ G    G   E +++F++M
Sbjct: 313 PTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAVFRKM 372

Query: 552 NLRNIKPNHVSMAMLMSACGH 614
              N+KP+ ++   +++AC H
Sbjct: 373 LQGNVKPDEITFVAVLAACSH 393


>ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
           gi|241919651|gb|EER92795.1| hypothetical protein
           SORBIDRAFT_01g045970 [Sorghum bicolor]
          Length = 531

 Score =  148 bits (374), Expect = 1e-33
 Identities = 81/202 (40%), Positives = 117/202 (57%), Gaps = 6/202 (2%)
 Frame = +3

Query: 21  SEVTREAILIYRMMHQR------GAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGH 182
           S   R+A+ IY  M +       G  P+  T   VL+AC+ + A   G QVHAH  K G 
Sbjct: 86  SYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFVLRACAAMGASETGAQVHAHVVKAGC 145

Query: 183 NSSMYVQATLADMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDK 362
            S  +V+  L  M+   G +  A+ L    + ++ V  + MIS + + GD+ AARELFD+
Sbjct: 146 ESDAFVRNALIGMHATCGDLGAAAALFDGEAREDAVAWSAMISGFARRGDIGAARELFDE 205

Query: 363 MSHKDSVSWNVMISGYAGIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSLF 542
              KD VSWNVMI+ YA +GD + AR+LFD   +R++ SWNA+++GY R G   + M LF
Sbjct: 206 SPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSHKQAMELF 265

Query: 543 KEMNLRNIKPNHVSMAMLMSAC 608
           ++M     KP+ V+M  L+SAC
Sbjct: 266 EQMQAMGEKPDTVTMLSLLSAC 287



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
 Frame = +3

Query: 222 YTRVGRIQEASRLLWT----SSEDNVVLCNTMISHYCKEGDMEAARELFDKMSHKDS--- 380
           Y R G  ++A  L         + + V   +++S     GDM+A R L   +S + S   
Sbjct: 252 YVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLHRFLSGRFSRIG 311

Query: 381 ---VSWNVMISGYAGIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSLFKEM 551
              V  N +I  YA  G  ++A ++F  M ++ +S+WN+++ G    G   E + +F++M
Sbjct: 312 PSTVLGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVTEAIDVFQKM 371

Query: 552 NLRNIKPNHVSMAMLMSACGH 614
              N+KP+ ++   ++ AC H
Sbjct: 372 LQGNVKPDEITFVAVLVACSH 392


>gb|EMJ16874.1| hypothetical protein PRUPE_ppa003946mg [Prunus persica]
          Length = 539

 Score =  147 bits (371), Expect = 2e-33
 Identities = 76/197 (38%), Positives = 119/197 (60%)
 Frame = +3

Query: 18  RSEVTREAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMY 197
           +S+    AI++Y  M  R A P+ FT   +LKAC+ L  V  G  +H    + G  S+ +
Sbjct: 90  QSQNPLNAIVLYTRMENRHAMPDSFTFPFILKACTKLSWVKMGMGIHGKVVRFGFESNTF 149

Query: 198 VQATLADMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKMSHKD 377
           V+ TL   +   G ++ AS L   S++ +VV  + + + Y + G ++ AR+LFD+M  KD
Sbjct: 150 VRNTLIYFHANCGDLKIASELFDASAKRDVVPWSALTAGYARRGKLDEARQLFDEMPVKD 209

Query: 378 SVSWNVMISGYAGIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSLFKEMNL 557
            VSWNVMI+GY   G+  +ARKLFD++ ER++ +WNA++AGY   G   + + +F+EM  
Sbjct: 210 LVSWNVMITGYGKQGEMESARKLFDKVPERDVVTWNAMIAGYVLCGSNEQALQMFEEMRS 269

Query: 558 RNIKPNHVSMAMLMSAC 608
              KP+ V+M  L+SAC
Sbjct: 270 LGEKPDEVTMLSLLSAC 286


>ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  147 bits (371), Expect = 2e-33
 Identities = 69/189 (36%), Positives = 116/189 (61%)
 Frame = +3

Query: 45  LIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMYVQATLADMY 224
           L ++M HQ     + +++S V++AC  LK    G ++H    K+G  S ++V+  L +MY
Sbjct: 91  LFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMY 150

Query: 225 TRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKMSHKDSVSWNVMIS 404
            + G I+ A  +L   +  ++V  N +++ Y + G++  A +LFD+M  +D VSWN MI 
Sbjct: 151 AKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIH 210

Query: 405 GYAGIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSLFKEMNLRNIKPNHVS 584
           G+A +GD  TA+KLFD+  ER++ SW++++A Y +     E + LF EM L N+ P+ V+
Sbjct: 211 GHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVT 270

Query: 585 MAMLMSACG 611
           M  ++SACG
Sbjct: 271 MVSVLSACG 279


>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Vitis vinifera]
          Length = 536

 Score =  147 bits (371), Expect = 2e-33
 Identities = 74/202 (36%), Positives = 115/202 (56%), Gaps = 1/202 (0%)
 Frame = +3

Query: 15  YRSEVTREAIL-IYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSS 191
           Y +  T EA L I+  M      P+ +T +  LK+C     V EG Q+H H  K G    
Sbjct: 83  YANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDD 142

Query: 192 MYVQATLADMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKMSH 371
           +++Q TL  +Y   G I++A  LL    E +VV  N ++S Y + G ME A  LFD+M+ 
Sbjct: 143 LFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELACHLFDEMTE 202

Query: 372 KDSVSWNVMISGYAGIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSLFKEM 551
           ++  SWN MISGY G+G    AR++F +   + + SWNA++ GY   G + EV+ LF++M
Sbjct: 203 RNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDM 262

Query: 552 NLRNIKPNHVSMAMLMSACGHL 617
               +KP++ ++  ++SAC H+
Sbjct: 263 QHAGVKPDNCTLVSVLSACAHV 284



 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 38/145 (26%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
 Frame = +3

Query: 36  EAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMYVQATLA 215
           E ++++  M   G  P+  T+ SVL AC+ + A+ +G  VHA+  K G +   +V   L 
Sbjct: 254 EVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALV 313

Query: 216 DMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKM----SHKDSV 383
           DMY++ G I++A  +  +    ++   N++IS     G  + A ++F +M       + V
Sbjct: 314 DMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEV 373

Query: 384 SWNVMISGYAGIGDTSTARKLFDQM 458
           ++  ++S  +  G     R++F+ M
Sbjct: 374 TFVCVLSACSRAGLLDEGREMFNLM 398


>ref|XP_002311462.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222851282|gb|EEE88829.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 538

 Score =  147 bits (371), Expect = 2e-33
 Identities = 84/232 (36%), Positives = 124/232 (53%), Gaps = 32/232 (13%)
 Frame = +3

Query: 18  RSEVTREAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMY 197
           ++E  ++ I+++R M      PN FT   +LK+C  + A+ EG +VH    K G  ++ +
Sbjct: 28  QNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVKINALKEGEEVHCFVIKSGFRANPF 87

Query: 198 VQATLADMYTRVGRIQEASRLL----------WTSS---------------------EDN 284
           V  TL DMY   G I  A R+           WT+                      E +
Sbjct: 88  VATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAMINGYITCCDLVTARRLFDLAPERD 147

Query: 285 VVLCNTMISHYCKEGDMEAARELFDKMSHKDSVSWNVMISGYAGIGDTSTARKLFDQMTE 464
           +VL NTMIS Y +  D+  ARELFDKM +KD +SWN +++GYA  GD     +LF++M E
Sbjct: 148 IVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSWNTVLNGYASNGDVMACERLFEEMPE 207

Query: 465 REISSWNALMAGYCRDGGWYEVMSLFKEMNL-RNIKPNHVSMAMLMSACGHL 617
           R + SWNAL+ GY R+G + EV+S FK M +   + PN  ++  ++SAC  L
Sbjct: 208 RNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARL 259


>ref|XP_004239417.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Solanum lycopersicum]
          Length = 621

 Score =  146 bits (368), Expect = 5e-33
 Identities = 85/232 (36%), Positives = 127/232 (54%), Gaps = 32/232 (13%)
 Frame = +3

Query: 18  RSEVTREAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMY 197
           ++++ R+ ++ +R M       N F+   VLK+C  L A+ EG +VH    K+G  ++ +
Sbjct: 114 QNDMYRDVVVSFRRMMNEDVSLNCFSFPMVLKSCGKLLALVEGEEVHGVVVKVGFLTNTF 173

Query: 198 VQATLADMYTRVGRIQEASRLL----------WTS---------------------SEDN 284
           V +TL DMY+ VGR++ A R+           WTS                      E +
Sbjct: 174 VGSTLIDMYSSVGRVKCAYRVFNEMVLRNVFTWTSMINGYIANGDLVSARMLFDLAPERD 233

Query: 285 VVLCNTMISHYCKEGDMEAARELFDKMSHKDSVSWNVMISGYAGIGDTSTARKLFDQMTE 464
           VVL N MI+ Y +  DME AR+LFD M +KD +SWN +++GYA  GD      LF++M E
Sbjct: 234 VVLWNRMITGYIECRDMEEARKLFDVMPNKDLMSWNTLLNGYANNGDVEGCENLFEEMKE 293

Query: 465 REISSWNALMAGYCRDGGWYEVMSLFKEM-NLRNIKPNHVSMAMLMSACGHL 617
           R I SWN L+ GY  +G + EV+S FK M N  ++KPN  ++  ++SAC  L
Sbjct: 294 RNIFSWNGLIGGYAHNGRFTEVISAFKRMLNESDVKPNDATLVNVLSACTRL 345



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 44/188 (23%), Positives = 73/188 (38%)
 Frame = +3

Query: 54  RMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMYVQATLADMYTRV 233
           RM+++    PN  T+ +VL AC+ L A+  G  VH ++   G+  ++YV   L DMY + 
Sbjct: 321 RMLNESDVKPNDATLVNVLSACTRLGALDLGKWVHVYAESNGYKHNVYVANGLIDMYAKC 380

Query: 234 GRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKMSHKDSVSWNVMISGYA 413
           G +  A                                ++F  M  +D +SWN +I+G A
Sbjct: 381 GLVGNAV-------------------------------DVFRSMDKRDLISWNTIINGLA 409

Query: 414 GIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSLFKEMNLRNIKPNHVSMAM 593
             G  S A                               +SLF EM    ++P+ ++   
Sbjct: 410 VHGRGSDA-------------------------------LSLFAEMKNSGVEPDGITFIG 438

Query: 594 LMSACGHL 617
           ++ AC H+
Sbjct: 439 VLCACSHM 446


>gb|EOX94498.1| Basic helix-loop-helix DNA-binding superfamily protein [Theobroma
           cacao]
          Length = 600

 Score =  145 bits (366), Expect = 9e-33
 Identities = 68/194 (35%), Positives = 115/194 (59%)
 Frame = +3

Query: 36  EAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMYVQATLA 215
           +A+  ++ M + G  P+ FT SS++KAC  +  +  G  VH    K G  S ++VQ  L 
Sbjct: 129 QALDYHKHMLRAGVWPSSFTFSSLVKACGLVSELGFGESVHGQVWKHGFESHVFVQTALV 188

Query: 216 DMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKMSHKDSVSWNV 395
           D Y  VG+  E+ R+     + +V    TM+S + K GD+ ++R LFD+M  +++ +WN 
Sbjct: 189 DFYANVGKFAESKRVFDEMPDRDVFAWTTMVSGFLKAGDLVSSRRLFDEMPERNTATWNA 248

Query: 396 MISGYAGIGDTSTARKLFDQMTEREISSWNALMAGYCRDGGWYEVMSLFKEMNLRNIKPN 575
           MI GYA +GD  +A   F+QM  ++I SW +++  Y ++  + E +++F+EM    + P+
Sbjct: 249 MIDGYARVGDVESAELFFNQMPVKDIISWTSMINCYSKNKQFREALAVFEEMRRNKVSPD 308

Query: 576 HVSMAMLMSACGHL 617
            V+MA ++SAC HL
Sbjct: 309 EVTMASVISACAHL 322



 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
 Frame = +3

Query: 33  REAILIYRMMHQRGAHPNPFTISSVLKACSFLKAVPEGNQVHAHSTKLGHNSSMYVQATL 212
           REA+ ++  M +    P+  T++SV+ AC+ L A+  G ++H +  + G    +Y+ + L
Sbjct: 291 REALAVFEEMRRNKVSPDEVTMASVISACAHLGALNTGKEIHHYVMQNGFYLDVYIGSAL 350

Query: 213 ADMYTRVGRIQEASRLLWTSSEDNVVLCNTMISHYCKEGDMEAARELFDKMSH----KDS 380
            DMY + G ++ +    +   E N+   N++I      G  + A  +FD M       + 
Sbjct: 351 VDMYAKCGSLERSLLAFFKLREKNLFCWNSVIEGLAVHGYAQEALAMFDSMERHHVKPNG 410

Query: 381 VSWNVMISGYAGIGDTSTARKLFDQMTE-----REISSWNALMAGYCRDGGWYEVMSLFK 545
           V++  ++S     G     R+ F  MT       E+  +  ++    + G   + + L +
Sbjct: 411 VTFVSVLSACTHAGLVEVGRQRFLSMTRDYSIPPEVEHYGCMVDLLSKAGLLEDALFLIR 470

Query: 546 EMNLRNIKPNHVSMAMLMSAC 608
            M L   +PN V    L+  C
Sbjct: 471 SMKL---EPNPVIWGALLGGC 488