BLASTX nr result
ID: Zingiber24_contig00029935
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00029935
(711 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi... 64 4e-08
ref|XP_006353201.1| PREDICTED: pentatricopeptide repeat-containi... 64 6e-08
ref|XP_003541711.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_004250515.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
ref|XP_006467676.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
ref|XP_006467675.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
gb|ESW20063.1| hypothetical protein PHAVU_006G178000g [Phaseolus... 61 4e-07
ref|XP_002305756.1| hypothetical protein POPTR_0004s05320g [Popu... 60 5e-07
ref|XP_002522543.1| pentatricopeptide repeat-containing protein,... 60 7e-07
ref|XP_006449472.1| hypothetical protein CICLE_v10014987mg [Citr... 60 9e-07
ref|XP_004485875.1| PREDICTED: pentatricopeptide repeat-containi... 60 9e-07
ref|XP_002450172.1| hypothetical protein SORBIDRAFT_05g001460 [S... 59 2e-06
ref|XP_006415632.1| hypothetical protein EUTSA_v10009590mg [Eutr... 58 3e-06
ref|XP_006841418.1| hypothetical protein AMTR_s00003p00032470 [A... 58 3e-06
ref|XP_006307253.1| hypothetical protein CARUB_v10008869mg [Caps... 58 3e-06
ref|XP_006486584.1| PREDICTED: pentatricopeptide repeat-containi... 57 5e-06
ref|XP_006422411.1| hypothetical protein CICLE_v10028001mg [Citr... 57 5e-06
ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat... 57 6e-06
ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selag... 57 6e-06
ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Sela... 57 6e-06
>ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
mitochondrial [Vitis vinifera]
Length = 533
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = -1
Query: 699 RPGAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWVDVNKG 559
RPGAYV LSN AAA KW VS+VR+LMK GVSK TG SWV + G
Sbjct: 486 RPGAYVALSNALAAAGKWDSVSEVRQLMKVRGVSKDTGCSWVGTDSG 532
>ref|XP_006353201.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
mitochondrial-like [Solanum tuberosum]
Length = 527
Score = 63.5 bits (153), Expect = 6e-08
Identities = 31/61 (50%), Positives = 40/61 (65%)
Frame = -1
Query: 711 SRNERPGAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWVDVNKGA*KFLFRKE 532
S RPGAYV LSN A A +W GVS++R++MK G+SKGTG SWV + FL ++
Sbjct: 467 SSGSRPGAYVALSNALADAGRWDGVSELREIMKIRGISKGTGFSWVGSDGSLKAFLAGQQ 526
Query: 531 T 529
T
Sbjct: 527 T 527
>ref|XP_003541711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
mitochondrial-like [Glycine max]
Length = 525
Score = 62.4 bits (150), Expect = 1e-07
Identities = 27/42 (64%), Positives = 35/42 (83%)
Frame = -1
Query: 699 RPGAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWV 574
RPGAYV LSNT AAA KW+ V+++R++MK G+SK TG+SWV
Sbjct: 478 RPGAYVALSNTLAAAGKWESVTELREIMKERGISKDTGRSWV 519
>ref|XP_004250515.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
mitochondrial-like [Solanum lycopersicum]
Length = 538
Score = 62.0 bits (149), Expect = 2e-07
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = -1
Query: 711 SRNERPGAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWV 574
S RPGAYV LSN A A +W GVS++R++MK G+SKGTG SWV
Sbjct: 467 SSGSRPGAYVALSNALADAGRWDGVSELREIMKIRGISKGTGFSWV 512
>ref|XP_006467676.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 499
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/49 (59%), Positives = 34/49 (69%)
Frame = -1
Query: 705 NERPGAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWVDVNKG 559
N+RPGAYV LSNT AAA KW V+++R+ MK GV K TG SWV G
Sbjct: 450 NDRPGAYVALSNTLAAAGKWDSVTELREKMKLRGVLKDTGCSWVGTESG 498
>ref|XP_006467675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 534
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/49 (59%), Positives = 34/49 (69%)
Frame = -1
Query: 705 NERPGAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWVDVNKG 559
N+RPGAYV LSNT AAA KW V+++R+ MK GV K TG SWV G
Sbjct: 485 NDRPGAYVALSNTLAAAGKWDSVTELREKMKLRGVLKDTGCSWVGTESG 533
>gb|ESW20063.1| hypothetical protein PHAVU_006G178000g [Phaseolus vulgaris]
Length = 497
Score = 60.8 bits (146), Expect = 4e-07
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = -1
Query: 699 RPGAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWV 574
RPGAYV LSNT A A KW+ V+++R+ MKA G+SK TG+SWV
Sbjct: 450 RPGAYVALSNTLADAGKWESVTELRETMKARGISKDTGRSWV 491
>ref|XP_002305756.1| hypothetical protein POPTR_0004s05320g [Populus trichocarpa]
gi|222848720|gb|EEE86267.1| hypothetical protein
POPTR_0004s05320g [Populus trichocarpa]
Length = 530
Score = 60.5 bits (145), Expect = 5e-07
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = -1
Query: 699 RPGAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWV 574
RPGAYV LSNT AAAE+W VS++R++MK G+SK T SWV
Sbjct: 483 RPGAYVALSNTLAAAERWDSVSELREMMKLRGISKDTACSWV 524
>ref|XP_002522543.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538234|gb|EEF39843.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 530
Score = 60.1 bits (144), Expect = 7e-07
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = -1
Query: 699 RPGAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWV 574
R GAYV LSNT AAA KW GV++VR++MK+ G+ K TG SWV
Sbjct: 483 RSGAYVALSNTLAAAGKWDGVTEVREIMKSRGILKDTGSSWV 524
>ref|XP_006449472.1| hypothetical protein CICLE_v10014987mg [Citrus clementina]
gi|557552083|gb|ESR62712.1| hypothetical protein
CICLE_v10014987mg [Citrus clementina]
Length = 499
Score = 59.7 bits (143), Expect = 9e-07
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = -1
Query: 705 NERPGAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWVDVNKG 559
N+RPGAYV LSNT AAA KW V+++R+ M GV K TG SWV G
Sbjct: 450 NDRPGAYVALSNTLAAAGKWDSVTELREKMNLRGVLKDTGCSWVGTESG 498
>ref|XP_004485875.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
mitochondrial-like [Cicer arietinum]
Length = 525
Score = 59.7 bits (143), Expect = 9e-07
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1
Query: 705 NERPGAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWVDVN 565
N RPGAYV LSNT A A KW VS++R++MK G+SK T SWV N
Sbjct: 476 NGRPGAYVALSNTLADAGKWDSVSELREVMKERGISKDTACSWVGAN 522
>ref|XP_002450172.1| hypothetical protein SORBIDRAFT_05g001460 [Sorghum bicolor]
gi|241936015|gb|EES09160.1| hypothetical protein
SORBIDRAFT_05g001460 [Sorghum bicolor]
Length = 521
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/46 (60%), Positives = 32/46 (69%)
Frame = -1
Query: 711 SRNERPGAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWV 574
SR RPGAY+ SNT AAA KW+GV VR++MK GV K T SWV
Sbjct: 467 SRKGRPGAYMAFSNTLAAAGKWEGVHDVREMMKQRGVLKDTACSWV 512
>ref|XP_006415632.1| hypothetical protein EUTSA_v10009590mg [Eutrema salsugineum]
gi|557093403|gb|ESQ33985.1| hypothetical protein
EUTSA_v10009590mg [Eutrema salsugineum]
Length = 523
Score = 58.2 bits (139), Expect = 3e-06
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = -1
Query: 705 NERPGAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWVDVNK 562
++RPGAY+ LSN A+A KW+ VS++R +MKA + K G+SW+ V K
Sbjct: 474 DKRPGAYIALSNVLASAGKWENVSEIRDVMKARKIPKNIGRSWIGVEK 521
>ref|XP_006841418.1| hypothetical protein AMTR_s00003p00032470 [Amborella trichopoda]
gi|548843439|gb|ERN03093.1| hypothetical protein
AMTR_s00003p00032470 [Amborella trichopoda]
Length = 791
Score = 58.2 bits (139), Expect = 3e-06
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1
Query: 708 RNERPGAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWVDVNKGA*KFL 544
R G YV+LSN +A+ KW+GV+KVRK MK MGV K G SW++V+ FL
Sbjct: 618 RPRHDGTYVLLSNMYASIGKWEGVAKVRKTMKDMGVKKEPGCSWIEVDNQVHVFL 672
>ref|XP_006307253.1| hypothetical protein CARUB_v10008869mg [Capsella rubella]
gi|482575964|gb|EOA40151.1| hypothetical protein
CARUB_v10008869mg [Capsella rubella]
Length = 517
Score = 57.8 bits (138), Expect = 3e-06
Identities = 23/43 (53%), Positives = 35/43 (81%)
Frame = -1
Query: 705 NERPGAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSW 577
++RPGAY+ LSN +A+ +KW+ VSK+R++MKA +SK G+SW
Sbjct: 471 DKRPGAYLALSNVYASNDKWENVSKIRQVMKARKISKNIGRSW 513
>ref|XP_006486584.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Citrus sinensis]
Length = 645
Score = 57.4 bits (137), Expect = 5e-06
Identities = 23/45 (51%), Positives = 35/45 (77%)
Frame = -1
Query: 696 PGAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWVDVNK 562
PG Y++LSN +A ++KW V++VRK M+A G++K G SW++VNK
Sbjct: 476 PGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNK 520
>ref|XP_006422411.1| hypothetical protein CICLE_v10028001mg [Citrus clementina]
gi|557524345|gb|ESR35651.1| hypothetical protein
CICLE_v10028001mg [Citrus clementina]
Length = 643
Score = 57.4 bits (137), Expect = 5e-06
Identities = 23/45 (51%), Positives = 35/45 (77%)
Frame = -1
Query: 696 PGAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWVDVNK 562
PG Y++LSN +A ++KW V++VRK M+A G++K G SW++VNK
Sbjct: 474 PGTYILLSNIYANSQKWDEVAEVRKTMRARGITKEPGCSWIEVNK 518
>ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 57.0 bits (136), Expect = 6e-06
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = -1
Query: 702 ERPGAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWVDVN 565
+ PG YV++SN +AAA +WK V +R++MK GV K G SW+++N
Sbjct: 914 QNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEIN 959
>ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein
SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 57.0 bits (136), Expect = 6e-06
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = -1
Query: 693 GAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWVDV 568
G YV+LSN +AAA +WK V K+RK+M A GV K G+SW+++
Sbjct: 502 GGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEI 543
>ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein
SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 57.0 bits (136), Expect = 6e-06
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = -1
Query: 693 GAYVVLSNTFAAAEKWKGVSKVRKLMKAMGVSKGTGQSWVDV 568
G YV+LSN +AAA +WK V K+RK+M A GV K G+SW+++
Sbjct: 443 GGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEI 484