BLASTX nr result

ID: Zingiber24_contig00029927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00029927
         (770 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD82774.1| putative MRP-like ABC transporter [Oryza sativa ...    58   4e-06

>dbj|BAD82774.1| putative MRP-like ABC transporter [Oryza sativa Japonica Group]
           gi|56784875|dbj|BAD82115.1| putative MRP-like ABC
           transporter [Oryza sativa Japonica Group]
          Length = 1487

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
 Frame = -2

Query: 325 AIIQLSWRMMMVDYLSIGEFSLLLVWIILDFTILIKSSTEVGEVRQHLTPRKQRVL--AR 152
           A++ ++  + ++DY+ I  F++LLVWI+ +   L K     G      + RK  VL  A 
Sbjct: 42  ALLVVNELIAVLDYVRIASFAILLVWILAELARLNKRHRREGHGDMVSSQRKGEVLLPAY 101

Query: 151 IIVACNXXXXXXXXXXXXXXIWKLGRVFVADVFLTMSWVLVTLYATYC 8
           IIV CN               WK   V +  +F ++SW+LVTL+  YC
Sbjct: 102 IIVLCNASISLMHICFSVLVFWKRQTVSLDLIFKSVSWLLVTLFLLYC 149


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