BLASTX nr result
ID: Zingiber24_contig00029832
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00029832
(244 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Sela... 172 3e-41
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 172 3e-41
tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family... 172 5e-41
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 171 9e-41
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 171 9e-41
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 170 2e-40
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 170 2e-40
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 169 3e-40
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] 169 3e-40
dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Ar... 169 5e-40
ref|NP_001190573.1| nuclear RNA polymerase C1 [Arabidopsis thali... 169 5e-40
ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana... 169 5e-40
ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr... 168 6e-40
ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Caps... 168 6e-40
ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s... 168 6e-40
ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 168 6e-40
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 168 6e-40
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 168 6e-40
ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab... 168 6e-40
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 168 8e-40
>ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii]
gi|300158014|gb|EFJ24638.1| hypothetical protein
SELMODRAFT_442419 [Selaginella moellendorffii]
Length = 1348
Score = 172 bits (437), Expect = 3e-41
Identities = 78/81 (96%), Positives = 81/81 (100%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
ERHLEDGD+VLFNRQPSLHRMSIMCHRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVP
Sbjct: 463 ERHLEDGDIVLFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNMHVP 522
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEALTLMGVQNNLCT
Sbjct: 523 QTEEARTEALTLMGVQNNLCT 543
>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
gi|300146624|gb|EFJ13293.1| hypothetical protein
SELMODRAFT_446351 [Selaginella moellendorffii]
Length = 1393
Score = 172 bits (437), Expect = 3e-41
Identities = 78/81 (96%), Positives = 81/81 (100%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
ERHLEDGD+VLFNRQPSLHRMSIMCHRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVP
Sbjct: 463 ERHLEDGDIVLFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNMHVP 522
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEALTLMGVQNNLCT
Sbjct: 523 QTEEARTEALTLMGVQNNLCT 543
>tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 1030
Score = 172 bits (435), Expect = 5e-41
Identities = 80/81 (98%), Positives = 80/81 (98%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP
Sbjct: 439 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 498
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEAL LMGVQNNLCT
Sbjct: 499 QTEEARTEALMLMGVQNNLCT 519
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 171 bits (433), Expect = 9e-41
Identities = 79/81 (97%), Positives = 80/81 (98%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVP
Sbjct: 449 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVP 508
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEAL LMGVQNNLCT
Sbjct: 509 QTEEARTEALMLMGVQNNLCT 529
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 171 bits (433), Expect = 9e-41
Identities = 79/81 (97%), Positives = 80/81 (98%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVP
Sbjct: 449 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVP 508
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEAL LMGVQNNLCT
Sbjct: 509 QTEEARTEALMLMGVQNNLCT 529
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Citrus sinensis]
gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1-like isoform X2 [Citrus
sinensis]
Length = 1404
Score = 170 bits (430), Expect = 2e-40
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
+RHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVP
Sbjct: 453 DRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVP 512
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEAL LMGVQNNLCT
Sbjct: 513 QTEEARTEALLLMGVQNNLCT 533
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 170 bits (430), Expect = 2e-40
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
+RHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVP
Sbjct: 468 DRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVP 527
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEAL LMGVQNNLCT
Sbjct: 528 QTEEARTEALLLMGVQNNLCT 548
>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 1179
Score = 169 bits (429), Expect = 3e-40
Identities = 76/81 (93%), Positives = 80/81 (98%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
ERHLEDGD+VLFNRQPSLHRMSIMCHRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVP
Sbjct: 230 ERHLEDGDIVLFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNMHVP 289
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEA+ LMGVQNNLCT
Sbjct: 290 QTEEARTEAILLMGVQNNLCT 310
>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
Length = 1395
Score = 169 bits (429), Expect = 3e-40
Identities = 77/81 (95%), Positives = 80/81 (98%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
+RHLEDGD+VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVP
Sbjct: 446 DRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVP 505
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEAL LMGVQNNLCT
Sbjct: 506 QTEEARTEALMLMGVQNNLCT 526
>dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Arabidopsis thaliana]
Length = 1383
Score = 169 bits (427), Expect = 5e-40
Identities = 76/81 (93%), Positives = 81/81 (100%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
+RHL++GDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVP
Sbjct: 451 DRHLQEGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVP 510
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEA+TLMGVQNNLCT
Sbjct: 511 QTEEARTEAITLMGVQNNLCT 531
>ref|NP_001190573.1| nuclear RNA polymerase C1 [Arabidopsis thaliana]
gi|332009887|gb|AED97270.1| nuclear RNA polymerase C1
[Arabidopsis thaliana]
Length = 1391
Score = 169 bits (427), Expect = 5e-40
Identities = 76/81 (93%), Positives = 81/81 (100%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
+RHL++GDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVP
Sbjct: 461 DRHLQEGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVP 520
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEA+TLMGVQNNLCT
Sbjct: 521 QTEEARTEAITLMGVQNNLCT 541
>ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana]
gi|332009886|gb|AED97269.1| nuclear RNA polymerase C1
[Arabidopsis thaliana]
Length = 1376
Score = 169 bits (427), Expect = 5e-40
Identities = 76/81 (93%), Positives = 81/81 (100%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
+RHL++GDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVP
Sbjct: 451 DRHLQEGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVP 510
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEA+TLMGVQNNLCT
Sbjct: 511 QTEEARTEAITLMGVQNNLCT 531
>ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum]
gi|557101978|gb|ESQ42341.1| hypothetical protein
EUTSA_v10012446mg [Eutrema salsugineum]
Length = 1375
Score = 168 bits (426), Expect = 6e-40
Identities = 76/81 (93%), Positives = 80/81 (98%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
+RHLE+GD VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVP
Sbjct: 452 DRHLEEGDAVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVP 511
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEA+TLMGVQNNLCT
Sbjct: 512 QTEEARTEAITLMGVQNNLCT 532
>ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Capsella rubella]
gi|482548169|gb|EOA12363.1| hypothetical protein
CARUB_v10025743mg [Capsella rubella]
Length = 1376
Score = 168 bits (426), Expect = 6e-40
Identities = 76/81 (93%), Positives = 80/81 (98%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
+RHLE+GD VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVP
Sbjct: 451 DRHLEEGDAVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVP 510
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEA+TLMGVQNNLCT
Sbjct: 511 QTEEARTEAITLMGVQNNLCT 531
>ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Fragaria vesca subsp. vesca]
Length = 1390
Score = 168 bits (426), Expect = 6e-40
Identities = 76/81 (93%), Positives = 80/81 (98%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
+RHLEDGD+VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVP
Sbjct: 446 DRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVP 505
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEA+ LMGVQNNLCT
Sbjct: 506 QTEEARTEAVMLMGVQNNLCT 526
>ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit rpc1-like, partial [Cucumis sativus]
Length = 693
Score = 168 bits (426), Expect = 6e-40
Identities = 76/81 (93%), Positives = 79/81 (97%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
ERHLEDGDVVLFNRQPSLHRMSIMCHR R+MPWRTLRFNESVCNPYNADFDGDEMN+HVP
Sbjct: 143 ERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVP 202
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEA+ LMGVQNNLCT
Sbjct: 203 QTEEARTEAILLMGVQNNLCT 223
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Cucumis sativus]
Length = 1400
Score = 168 bits (426), Expect = 6e-40
Identities = 76/81 (93%), Positives = 79/81 (97%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
ERHLEDGDVVLFNRQPSLHRMSIMCHR R+MPWRTLRFNESVCNPYNADFDGDEMN+HVP
Sbjct: 445 ERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVP 504
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEA+ LMGVQNNLCT
Sbjct: 505 QTEEARTEAILLMGVQNNLCT 525
>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Glycine max]
Length = 1391
Score = 168 bits (426), Expect = 6e-40
Identities = 76/81 (93%), Positives = 80/81 (98%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
+RHLEDGD+VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP
Sbjct: 448 DRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 507
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEA+ LMGV+NNLCT
Sbjct: 508 QTEEARTEAILLMGVENNLCT 528
>ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp.
lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein
ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata]
Length = 1376
Score = 168 bits (426), Expect = 6e-40
Identities = 76/81 (93%), Positives = 80/81 (98%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
+RHLE+GD VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVP
Sbjct: 451 DRHLEEGDAVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVP 510
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEA+TLMGVQNNLCT
Sbjct: 511 QTEEARTEAITLMGVQNNLCT 531
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Setaria italica]
Length = 1397
Score = 168 bits (425), Expect = 8e-40
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = -1
Query: 244 ERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 65
ERHLEDGDVVLFNRQPSLHRMSIM HRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP
Sbjct: 442 ERHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVP 501
Query: 64 QTEEARTEALTLMGVQNNLCT 2
QTEEARTEAL LMGVQNNLCT
Sbjct: 502 QTEEARTEALMLMGVQNNLCT 522