BLASTX nr result

ID: Zingiber24_contig00029721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00029721
         (269 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34995.3| unnamed protein product [Vitis vinifera]               56   6e-06
ref|NP_001059101.1| Os07g0192700 [Oryza sativa Japonica Group] g...    55   7e-06
gb|EEE66727.1| hypothetical protein OsJ_23415 [Oryza sativa Japo...    55   7e-06
ref|XP_004955728.1| PREDICTED: ATP-dependent zinc metalloproteas...    55   8e-06
ref|XP_004955729.1| PREDICTED: ATP-dependent zinc metalloproteas...    55   8e-06
ref|XP_002466265.1| hypothetical protein SORBIDRAFT_01g004740 [S...    55   1e-05

>emb|CBI34995.3| unnamed protein product [Vitis vinifera]
          Length = 850

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/74 (45%), Positives = 40/74 (54%)
 Frame = +3

Query: 45  DIDCCLQLSGTRGEARXXXXXXXXXXXXXXXXXXXXXXXVTLSRLLNFIDGL*STFGGDQ 224
           DIDC L L+G +GE++                       VTLS LLNFIDGL S  G ++
Sbjct: 733 DIDCSLDLTGQQGESKESK--------------------VTLSGLLNFIDGLWSACGEER 772

Query: 225 RIVFITNHVEKLGP 266
            IVF TNHVEKL P
Sbjct: 773 LIVFTTNHVEKLDP 786


>ref|NP_001059101.1| Os07g0192700 [Oryza sativa Japonica Group]
           gi|50510117|dbj|BAD30885.1| AAA-type ATPase-like [Oryza
           sativa Japonica Group] gi|113610637|dbj|BAF21015.1|
           Os07g0192700 [Oryza sativa Japonica Group]
           gi|125557550|gb|EAZ03086.1| hypothetical protein
           OsI_25230 [Oryza sativa Indica Group]
          Length = 533

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/74 (45%), Positives = 38/74 (51%)
 Frame = +3

Query: 45  DIDCCLQLSGTRGEARXXXXXXXXXXXXXXXXXXXXXXXVTLSRLLNFIDGL*STFGGDQ 224
           DIDC L L+G R   R                       VTLS LLNFIDGL S  GG++
Sbjct: 340 DIDCSLDLTGDRATRRPGEIRGGGSM-------------VTLSGLLNFIDGLWSASGGER 386

Query: 225 RIVFITNHVEKLGP 266
            +VF TNHVEKL P
Sbjct: 387 VVVFTTNHVEKLDP 400


>gb|EEE66727.1| hypothetical protein OsJ_23415 [Oryza sativa Japonica Group]
          Length = 481

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/74 (45%), Positives = 38/74 (51%)
 Frame = +3

Query: 45  DIDCCLQLSGTRGEARXXXXXXXXXXXXXXXXXXXXXXXVTLSRLLNFIDGL*STFGGDQ 224
           DIDC L L+G R   R                       VTLS LLNFIDGL S  GG++
Sbjct: 288 DIDCSLDLTGDRATRRPGEIRGGGSM-------------VTLSGLLNFIDGLWSASGGER 334

Query: 225 RIVFITNHVEKLGP 266
            +VF TNHVEKL P
Sbjct: 335 VVVFTTNHVEKLDP 348


>ref|XP_004955728.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 3,
           mitochondrial-like isoform X1 [Setaria italica]
          Length = 534

 Score = 54.7 bits (130), Expect(2) = 8e-06
 Identities = 33/74 (44%), Positives = 38/74 (51%)
 Frame = +3

Query: 45  DIDCCLQLSGTRGEARXXXXXXXXXXXXXXXXXXXXXXXVTLSRLLNFIDGL*STFGGDQ 224
           DIDC L L+G R   R                       VTLS LLNFIDGL S  GG++
Sbjct: 326 DIDCSLDLTGDRARQRRRPGGPPKDDDRYYADDRPRNT-VTLSGLLNFIDGLWSASGGER 384

Query: 225 RIVFITNHVEKLGP 266
            +VF TNHV+KL P
Sbjct: 385 IVVFTTNHVDKLDP 398



 Score = 20.4 bits (41), Expect(2) = 8e-06
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 2   RRLIVNTAGQSIIV 43
           RRL++ T  +SIIV
Sbjct: 310 RRLLIETTSKSIIV 323


>ref|XP_004955729.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 3,
           mitochondrial-like isoform X2 [Setaria italica]
          Length = 533

 Score = 54.7 bits (130), Expect(2) = 8e-06
 Identities = 33/74 (44%), Positives = 38/74 (51%)
 Frame = +3

Query: 45  DIDCCLQLSGTRGEARXXXXXXXXXXXXXXXXXXXXXXXVTLSRLLNFIDGL*STFGGDQ 224
           DIDC L L+G R   R                       VTLS LLNFIDGL S  GG++
Sbjct: 325 DIDCSLDLTGDRARQRRRPGGPPKDDDRYYADDRPRNT-VTLSGLLNFIDGLWSASGGER 383

Query: 225 RIVFITNHVEKLGP 266
            +VF TNHV+KL P
Sbjct: 384 IVVFTTNHVDKLDP 397



 Score = 20.4 bits (41), Expect(2) = 8e-06
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 2   RRLIVNTAGQSIIV 43
           RRL++ T  +SIIV
Sbjct: 309 RRLLIETTSKSIIV 322


>ref|XP_002466265.1| hypothetical protein SORBIDRAFT_01g004740 [Sorghum bicolor]
           gi|241920119|gb|EER93263.1| hypothetical protein
           SORBIDRAFT_01g004740 [Sorghum bicolor]
          Length = 529

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/77 (45%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
 Frame = +3

Query: 45  DIDCCLQLSGTRGE---ARXXXXXXXXXXXXXXXXXXXXXXXVTLSRLLNFIDGL*STFG 215
           DIDC L L+G R +   A                        VTLS LLNFIDGL S  G
Sbjct: 316 DIDCSLDLTGAREKKAAAEEDDKDKKGGGPVRPGEKKDTSSKVTLSGLLNFIDGLWSACG 375

Query: 216 GDQRIVFITNHVEKLGP 266
           G++ IVF TNHVEKL P
Sbjct: 376 GERIIVFTTNHVEKLDP 392


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