BLASTX nr result
ID: Zingiber24_contig00029450
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00029450
(1209 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containi... 332 2e-88
ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containi... 327 8e-87
gb|EMJ09280.1| hypothetical protein PRUPE_ppa001520mg [Prunus pe... 325 2e-86
gb|EOY07712.1| Tetratricopeptide repeat (TPR)-like superfamily p... 323 1e-85
ref|XP_004305248.1| PREDICTED: pentatricopeptide repeat-containi... 323 1e-85
ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containi... 322 1e-85
gb|EXB84820.1| hypothetical protein L484_003853 [Morus notabilis] 320 6e-85
gb|ESW34707.1| hypothetical protein PHAVU_001G174000g [Phaseolus... 320 1e-84
gb|ESW34706.1| hypothetical protein PHAVU_001G174000g [Phaseolus... 320 1e-84
gb|AFW88748.1| hypothetical protein ZEAMMB73_433087 [Zea mays] g... 319 1e-84
ref|XP_006428907.1| hypothetical protein CICLE_v10011055mg [Citr... 317 6e-84
ref|XP_002326162.1| predicted protein [Populus trichocarpa] 316 1e-83
ref|XP_006381507.1| pentatricopeptide repeat-containing family p... 316 1e-83
ref|XP_002465430.1| hypothetical protein SORBIDRAFT_01g038770 [S... 314 4e-83
ref|XP_006577707.1| PREDICTED: pentatricopeptide repeat-containi... 313 9e-83
ref|XP_006651267.1| PREDICTED: pentatricopeptide repeat-containi... 311 3e-82
ref|XP_004493936.1| PREDICTED: pentatricopeptide repeat-containi... 311 3e-82
ref|NP_001049766.1| Os03g0284900 [Oryza sativa Japonica Group] g... 311 3e-82
gb|ABF95347.1| pentatricopeptide, putative, expressed [Oryza sat... 311 3e-82
ref|XP_006828302.1| hypothetical protein AMTR_s00023p00232870 [A... 311 4e-82
>ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Vitis vinifera]
gi|297741486|emb|CBI32618.3| unnamed protein product
[Vitis vinifera]
Length = 842
Score = 332 bits (850), Expect = 2e-88
Identities = 182/338 (53%), Positives = 233/338 (68%), Gaps = 11/338 (3%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+NILMKACG+D+YRAKALMDEMKT GL+PNHISWS LID G N+ GA++ + M++
Sbjct: 503 TYNILMKACGTDYYRAKALMDEMKTAGLSPNHISWSILIDICGGTGNIVGAVRILKTMRE 562
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
G+K DV AYTTAIK CVE+KNL++A+SL+ EMKRYQIQPNLVTYNT+LRAR +YGS E
Sbjct: 563 AGIKPDVVAYTTAIKYCVESKNLKIAFSLFAEMKRYQIQPNLVTYNTLLRARSRYGSLHE 622
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNSRKCNN 541
VQQCLAIYQ MRK+GY+SNDYYLKELIEEWCEGV+ Q + + N + + +
Sbjct: 623 VQQCLAIYQHMRKAGYKSNDYYLKELIEEWCEGVI--QDNNLNQSKFSSVNRADWGRPQS 680
Query: 542 LLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMIIITD 721
LLLEKVA HL++ + + AID++GLT++EARIVVL+VLRMIKE+Y+LG I+DD++II
Sbjct: 681 LLLEKVAAHLQKSVAESLAIDLQGLTQVEARIVVLAVLRMIKENYILGHPIKDDILIILG 740
Query: 722 VVDKGAARTLTSHNLDVQRCIVKVLQEDLSFDVRTGHG--ALD-------DPFSKP--ST 868
+ K L H V+ I+K+LQ++L +V ALD P S P
Sbjct: 741 I--KKVDANLVEHESPVKGAIIKLLQDELGLEVAFAGPKIALDKRINLGGPPGSDPDWQE 798
Query: 869 VLRPPEAVKGFKFQARRPQNTGMIKVTKESLLGWLQRK 982
L + RRP KVT++SL WLQR+
Sbjct: 799 ALGRNRLPTELESSTRRPAVLQRFKVTRKSLDHWLQRR 836
>ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Glycine max]
Length = 811
Score = 327 bits (837), Expect = 8e-87
Identities = 180/338 (53%), Positives = 233/338 (68%), Gaps = 11/338 (3%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+NIL+KACG+D+Y AKAL+ EM+T+GL+PN ISWS LID GA+ N+ GA++ + M D
Sbjct: 482 TYNILLKACGTDYYHAKALIKEMETVGLSPNQISWSILIDICGASSNVEGAIEILKTMGD 541
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
G+K DV AYTTAIK CVE+KN A +LYEEMK YQI+PN VTYNT+L+AR KYG E
Sbjct: 542 AGIKPDVIAYTTAIKVCVESKNFMQALTLYEEMKCYQIRPNWVTYNTLLKARSKYGFLHE 601
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNSRKCNN 541
VQQCLAIYQDMRK+GY+ NDYYL+ELIEEWCEGV+ Q K + N++ S + +
Sbjct: 602 VQQCLAIYQDMRKAGYKPNDYYLEELIEEWCEGVI--QNNREKQGEFSSSNKSESERPQS 659
Query: 542 LLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMIIITD 721
LLLEK+A HL + + D AID++GLTK+EAR+VVL+VLRMIKE+Y LG ++ DD++II
Sbjct: 660 LLLEKIAAHLLKRVADILAIDVQGLTKVEARLVVLAVLRMIKENYGLGHSVNDDILIIIG 719
Query: 722 V--VDKGAARTLTSHNLDVQRCIVKVLQEDLSFDVRTGHG--ALDDP-------FSKPST 868
VD+ ++ H L+VQ I+K+L+ +L +V AL D FS S
Sbjct: 720 ATKVDENPSK----HILEVQEAIIKLLRNELGLEVFPAKTRLALSDTANLEYPNFSNLSI 775
Query: 869 VLRPPEAVKGFKFQARRPQNTGMIKVTKESLLGWLQRK 982
+P E G FQ RRP +KVTK+SL WL RK
Sbjct: 776 EAQPGENALG--FQTRRPGVLVRLKVTKKSLYRWLHRK 811
Score = 57.8 bits (138), Expect = 9e-06
Identities = 47/191 (24%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Frame = +2
Query: 5 FNILMKACG--SDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQ 178
+ + CG D+ +++ + +++ +TPN +++L++ +H+LS + ++ MQ
Sbjct: 230 YRATIDTCGLCRDYMKSRYIYEDLLNQKITPNIYVFNSLMNVN--SHDLSYTLNLYQNMQ 287
Query: 179 DGGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRY----QIQPNLVTYNTMLRARDKY 346
+ G+K D+ +Y +KAC + +A +Y E+K Q++ ++ TY+T+++
Sbjct: 288 NLGLKPDMTSYNILLKACCVAGRVDLAQDIYRELKHLESVGQLKLDVFTYSTIIKV---- 343
Query: 347 GSFVEV---QQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNE 517
F +V Q L I QDM +G N LI L Q + G E
Sbjct: 344 --FADVKLWQMALKIKQDMLSAGVSLNIVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 401
Query: 518 TNSRKCNNLLL 550
N+ +C N++L
Sbjct: 402 PNT-QCFNIIL 411
>gb|EMJ09280.1| hypothetical protein PRUPE_ppa001520mg [Prunus persica]
Length = 809
Score = 325 bits (833), Expect = 2e-86
Identities = 175/338 (51%), Positives = 231/338 (68%), Gaps = 11/338 (3%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+N LMKACG+D+Y AKAL+DEM+ +GL PN ISWS L D G + N+ GA+Q + M+
Sbjct: 473 TYNTLMKACGTDYYHAKALLDEMRAVGLYPNQISWSILADICGGSGNVEGALQILKNMRA 532
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
GMK DV AYTTAIK CVEN+NL +A SL+ EMK+YQI PNLVTYNT+LRAR +YGS E
Sbjct: 533 AGMKPDVVAYTTAIKVCVENENLELALSLFGEMKKYQIHPNLVTYNTLLRARSRYGSVSE 592
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNSRKCNN 541
VQQCLAIYQDMRK+GY+SNDYYL++LIEEWCEGV+ Q + K + N+T+ + +
Sbjct: 593 VQQCLAIYQDMRKAGYKSNDYYLEQLIEEWCEGVI--QDSNAKQEEFSSCNKTDIGRPGS 650
Query: 542 LLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMIIITD 721
LLLEKVA HL+ I + A+D++GLTK+EARIVVL+VLRMIKE+Y LG +++DDM+I+
Sbjct: 651 LLLEKVAEHLQTHIAETLAVDLQGLTKVEARIVVLAVLRMIKENYTLGHSVKDDMLIVVG 710
Query: 722 VVDKGAARTLTSHNLDVQRCIVKVLQEDLSFDVRTGHG--ALDDPFSKPST--------- 868
VD G+ T+ NL+V+ I K+LQ++L V LD + +T
Sbjct: 711 EVDGGS----TTQNLEVKDAITKLLQDELGLKVLAAGAKVGLDTTIERGNTTDSDQDLDE 766
Query: 869 VLRPPEAVKGFKFQARRPQNTGMIKVTKESLLGWLQRK 982
+ E + RRP +KVT+ SL WL+R+
Sbjct: 767 MSGRDELPAELIYSTRRPVALERLKVTRGSLQHWLRRR 804
Score = 62.8 bits (151), Expect = 3e-07
Identities = 30/99 (30%), Positives = 55/99 (55%)
Frame = +2
Query: 38 FYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQDGGMKLDVAAYTT 217
++ A + ++M + G+TPN ++WS+LI + A + A+Q F M G + + +
Sbjct: 382 WHMALNVKEDMLSAGVTPNTVTWSSLISACANAGIVEKAIQLFEEMLLAGSEPNSQCFNI 441
Query: 218 AIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRA 334
+ ACVE A+ L++ +KR +P TYNT+++A
Sbjct: 442 LLHACVEANQYDRAFRLFQSLKRLSFKPTTTTYNTLMKA 480
>gb|EOY07712.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 858
Score = 323 bits (827), Expect = 1e-85
Identities = 174/338 (51%), Positives = 236/338 (69%), Gaps = 11/338 (3%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+NILMKAC +D+YRAKALMDEMK++GL+PNH+SWS LID + N+ GA+Q + M
Sbjct: 520 TYNILMKACCTDYYRAKALMDEMKSVGLSPNHVSWSILIDICRGSGNVEGAIQILKTMHV 579
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
G+K DV AYTTAIK CV +KNL++A+SL+EEMKRY++QPNLVTYNT+LRAR +YGS E
Sbjct: 580 TGIKPDVVAYTTAIKVCVGSKNLKLAFSLFEEMKRYRVQPNLVTYNTLLRARSRYGSLHE 639
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNSRKCNN 541
VQQCLAIYQDMRK+GY+SND YLKELIEEWCEGV+ + +HK + T+ + ++
Sbjct: 640 VQQCLAIYQDMRKAGYKSNDIYLKELIEEWCEGVI--KENNHKREGLSSCKRTDLERPHS 697
Query: 542 LLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMIIITD 721
LLLEK+A+HL+ + AID+RGLTK+EARIVVL+VLRMIKE+++LG +++DDM+II
Sbjct: 698 LLLEKIAVHLQMSTAESPAIDLRGLTKVEARIVVLAVLRMIKENHILGHSVKDDMLIILG 757
Query: 722 VVDKGAARTLTSHNLDVQRCIVKVLQEDLSFD-------VRTGHGALDDPFSKP----ST 868
V ++ A +V+ ++K+LQ++L + V+ G L P T
Sbjct: 758 VSERHA--NAAKQKSEVKDAVMKLLQDELGLEVLLVEPQVKNGLVDLQTPIDADPVLLET 815
Query: 869 VLRPPEAVKGFKFQARRPQNTGMIKVTKESLLGWLQRK 982
V + + K RRP +KVT++SL WL R+
Sbjct: 816 VGKNSLSSKPLS-STRRPVILQRLKVTRKSLNHWLWRR 852
Score = 63.2 bits (152), Expect = 2e-07
Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 6/187 (3%)
Frame = +2
Query: 5 FNILMKACG--SDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQ 178
+ ++ ACG D+ +++ + +++ +TPN +++L++ AH+L + ++ MQ
Sbjct: 271 YRAIIDACGLCGDYLKSRNIYEDLVNQRVTPNIYVFNSLMNVN--AHDLGYTLDVYKDMQ 328
Query: 179 DGGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQ----IQPNLVTYNTMLRARDKY 346
+ G+ D+A+Y +KAC + + +A +Y E+K + ++ ++ TY T+++ +
Sbjct: 329 NLGITADMASYNILLKACCLAQRVDLAQDIYNEVKHLESTGVLKLDVFTYCTIIKV---F 385
Query: 347 GSFVEVQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNS 526
Q L I +DM +G N LI L Q + TG E NS
Sbjct: 386 ADARLWQMALKIKEDMLSAGVTPNTVTWSSLISACANAGLVEQAFQLFEEMILTGCEPNS 445
Query: 527 RKCNNLL 547
+ CN LL
Sbjct: 446 QCCNILL 452
>ref|XP_004305248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 847
Score = 323 bits (827), Expect = 1e-85
Identities = 177/345 (51%), Positives = 239/345 (69%), Gaps = 18/345 (5%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+N LMKACGSD+Y AKALMDEMKT+GL PN I+WS L D G++ N+ GA+Q ++M+
Sbjct: 508 TYNTLMKACGSDYYHAKALMDEMKTVGLLPNQITWSILADICGSSGNVQGALQILKSMRV 567
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
G++ DV AYTTAIK CVE++NL +A L+ EMK+YQI PNLVTYNT+LRAR +YGS E
Sbjct: 568 AGIQPDVVAYTTAIKICVESENLDLALLLFAEMKKYQIHPNLVTYNTLLRARSRYGSVSE 627
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNSRKCNN 541
VQQCLAIYQDMRK+GY+ NDYYL++LIEEWCEGV+ C K G++ + + +
Sbjct: 628 VQQCLAIYQDMRKAGYKPNDYYLEQLIEEWCEGVIQDSCP--KQGEFSYGDKADIGRPGS 685
Query: 542 LLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMII--- 712
LLLEKVA HL++ I D A+D++GLTK+EARIVVL+VLRMIKE+Y+LG +++DDM+I
Sbjct: 686 LLLEKVAEHLQQHIADTLAVDLQGLTKVEARIVVLAVLRMIKENYILGDSVKDDMLIMVG 745
Query: 713 ITDVVDKGAARTLTSHNLDVQRCIVKVLQEDLSFDV--RTGHGALDDPFSKPSTV----- 871
+ D VD G+ T+HNL+V+ I K+LQ++L V ALD +T+
Sbjct: 746 VHDEVDGGS----TAHNLEVKDAITKLLQDELGLKVLSTVPKVALDTTIVSQNTIDSDQN 801
Query: 872 -----LR---PPEAVKGFKFQARRPQNTGMIKVTKESLLGWLQRK 982
LR PE + + RRP +KV+++SL WL+++
Sbjct: 802 LDEKPLRKELQPELI----YSTRRPVVLERLKVSRKSLQQWLRKR 842
>ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 322 bits (826), Expect = 1e-85
Identities = 174/333 (52%), Positives = 237/333 (71%), Gaps = 7/333 (2%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+NILMKACG+D+Y AKALM+EMK++GLTPNHISWS L+D G +H++ A+Q M+
Sbjct: 520 TYNILMKACGTDYYHAKALMEEMKSVGLTPNHISWSILVDICGRSHDVESAVQILTTMRM 579
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
G+ DV AYTTAIK CVE KN ++A+SL+EEMKR++IQPNLVTY+T+LRAR YGS E
Sbjct: 580 AGVDPDVVAYTTAIKVCVEGKNWKLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHE 639
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTG-NETNSRKCN 538
VQQCLAIYQDMRKSG++SND+YLKELI EWCEGV+ ++++ P+ T N+ + K
Sbjct: 640 VQQCLAIYQDMRKSGFKSNDHYLKELIAEWCEGVI---QKNNQQPVEITPCNKIDIGKPR 696
Query: 539 NLLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMIIIT 718
L+LEKVA HL++ + ID++ LTK+EARIVVL+VLRMIKE+Y LG++++DD+ II
Sbjct: 697 CLILEKVADHLQKSFAESLTIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIIL 756
Query: 719 DVVDKGAARTLTSHNLDVQRCIVKVLQEDLSFDV-RTGHG-ALDDPFSKPSTVLRPPEAV 892
+V L N +V+ I ++LQ++L +V TG ALD + S+ + +
Sbjct: 757 EV--NKVETDLVPQNFEVRDAITRLLQDELGLEVLPTGPTIALDKVPNSESSKISHTTKL 814
Query: 893 KGF----KFQARRPQNTGMIKVTKESLLGWLQR 979
KG K+ R+P + +KVTK+SL WLQR
Sbjct: 815 KGTMGRNKYFTRKPADVQRLKVTKKSLQDWLQR 847
>gb|EXB84820.1| hypothetical protein L484_003853 [Morus notabilis]
Length = 822
Score = 320 bits (821), Expect = 6e-85
Identities = 165/327 (50%), Positives = 227/327 (69%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+NILMKACGSD+Y AKAL++EM+ +GL+PN I+WS LID G N+ GA+Q + M+
Sbjct: 490 TYNILMKACGSDYYHAKALIEEMEAVGLSPNQITWSILIDICGDLGNVEGALQILKTMRA 549
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
G++ DV AYTT IK CVE+K+L+ A+ L+ EMKRYQIQPNLVTYNT+LRAR++YGS E
Sbjct: 550 TGIEPDVVAYTTVIKVCVESKDLKQAFELFAEMKRYQIQPNLVTYNTLLRARNRYGSLQE 609
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNSRKCNN 541
V+QCLA+YQDMR++GY SNDYYLK+LIEEWCEGV+ Q+ + + N+T+ ++ +
Sbjct: 610 VKQCLAVYQDMRRAGYNSNDYYLKQLIEEWCEGVIQGNNQNRE--ESSSFNKTDKKRPQS 667
Query: 542 LLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMIIITD 721
LLLEKVA HL + I + +D++GL K+EARIVVL+VLRM+KE+Y +G ++DDM+II
Sbjct: 668 LLLEKVAEHLEKHIAETLTVDVQGLKKVEARIVVLAVLRMVKENYTMGYLVKDDMLIIIG 727
Query: 722 VVDKGAARTLTSHNLDVQRCIVKVLQEDLSFDVRTGHGALDDPFSKPSTVLRPPEAVKGF 901
A L+V+ I K+L+++L +V + ++ S L +
Sbjct: 728 ACKVDAVP--DEQELEVKDAITKLLKDELGLEVLSTGLKIEPNRQVDSDSLGSSDFSGEM 785
Query: 902 KFQARRPQNTGMIKVTKESLLGWLQRK 982
K+ RRP +KVTKESL WLQRK
Sbjct: 786 KYSTRRPVVIQRLKVTKESLQHWLQRK 812
>gb|ESW34707.1| hypothetical protein PHAVU_001G174000g [Phaseolus vulgaris]
Length = 809
Score = 320 bits (819), Expect = 1e-84
Identities = 175/340 (51%), Positives = 231/340 (67%), Gaps = 13/340 (3%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+NIL+KACG+D+Y AKAL+ EM+T+GL+PN ISWSTLID GA+ N+ GA++ + M D
Sbjct: 476 TYNILLKACGTDYYHAKALIKEMETVGLSPNQISWSTLIDICGASANVEGAIEILKNMGD 535
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
G+K DV AYTTAIK CVE+KN A +LY+EMK Y I+PNL+TYNT+L+AR KYGS E
Sbjct: 536 AGIKPDVIAYTTAIKVCVESKNFMQALALYKEMKSYHIRPNLITYNTLLKARSKYGSLHE 595
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNSRKCNN 541
VQQCLAIYQDMRK+GY+ ND YL+ELIEEWCEGV+ Q + N++ K +
Sbjct: 596 VQQCLAIYQDMRKAGYKPNDCYLEELIEEWCEGVI--QDNREIQGEFSSSNKSELEKSQS 653
Query: 542 LLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMIIITD 721
LLLEK+A HL + + D AID++GLTK+EAR+VVL+VLRMIKE+Y LG +I DD++I+
Sbjct: 654 LLLEKIAAHLLKRVADILAIDVQGLTKVEARLVVLAVLRMIKENYSLGHSINDDILIVIG 713
Query: 722 V--VDKGAARTLTSHNLDVQRCIVKVLQEDL---SFDVRTGHGALDDP-FSKPSTVLRPP 883
VD+ A+ + L+VQ I+K+L+ +L +F RT D P P+
Sbjct: 714 ATKVDENPAKRI----LEVQEAILKLLRNELGLEAFPARTRLALSDTPKLKNPTLANLKI 769
Query: 884 EAV-------KGFKFQARRPQNTGMIKVTKESLLGWLQRK 982
EAV FQ RRP +K+T++SL WL RK
Sbjct: 770 EAVPAEDALPTSMGFQTRRPGILVRLKITRKSLYSWLHRK 809
Score = 60.5 bits (145), Expect = 1e-06
Identities = 46/188 (24%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Frame = +2
Query: 5 FNILMKACG--SDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQ 178
+ ++ ACG D+ +++ + +++ +TPN +++L++ AH+LS + ++ MQ
Sbjct: 224 YRAIIDACGLCRDYMKSRYIYEDLLNQKITPNIYVFNSLMNVN--AHDLSYTLNLYQNMQ 281
Query: 179 DGGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRY----QIQPNLVTYNTMLRARDKY 346
+ G+K D+ +Y +K C + +A +Y E+K Q++ ++ TY+T+++ +
Sbjct: 282 NLGLKPDMTSYNILLKGCCVAGRVDLAQDIYRELKHLESVGQLKLDVFTYSTIIKV---F 338
Query: 347 GSFVEVQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNS 526
Q L I QDM +G N LI L Q + G E N+
Sbjct: 339 ADARLWQMALTIKQDMLSAGVSLNIVAWSSLINACAHAGLVEQAIQLFEEMLLAGREPNT 398
Query: 527 RKCNNLLL 550
+C N++L
Sbjct: 399 -QCFNIIL 405
>gb|ESW34706.1| hypothetical protein PHAVU_001G174000g [Phaseolus vulgaris]
Length = 594
Score = 320 bits (819), Expect = 1e-84
Identities = 175/340 (51%), Positives = 231/340 (67%), Gaps = 13/340 (3%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+NIL+KACG+D+Y AKAL+ EM+T+GL+PN ISWSTLID GA+ N+ GA++ + M D
Sbjct: 261 TYNILLKACGTDYYHAKALIKEMETVGLSPNQISWSTLIDICGASANVEGAIEILKNMGD 320
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
G+K DV AYTTAIK CVE+KN A +LY+EMK Y I+PNL+TYNT+L+AR KYGS E
Sbjct: 321 AGIKPDVIAYTTAIKVCVESKNFMQALALYKEMKSYHIRPNLITYNTLLKARSKYGSLHE 380
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNSRKCNN 541
VQQCLAIYQDMRK+GY+ ND YL+ELIEEWCEGV+ Q + N++ K +
Sbjct: 381 VQQCLAIYQDMRKAGYKPNDCYLEELIEEWCEGVI--QDNREIQGEFSSSNKSELEKSQS 438
Query: 542 LLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMIIITD 721
LLLEK+A HL + + D AID++GLTK+EAR+VVL+VLRMIKE+Y LG +I DD++I+
Sbjct: 439 LLLEKIAAHLLKRVADILAIDVQGLTKVEARLVVLAVLRMIKENYSLGHSINDDILIVIG 498
Query: 722 V--VDKGAARTLTSHNLDVQRCIVKVLQEDL---SFDVRTGHGALDDP-FSKPSTVLRPP 883
VD+ A+ + L+VQ I+K+L+ +L +F RT D P P+
Sbjct: 499 ATKVDENPAKRI----LEVQEAILKLLRNELGLEAFPARTRLALSDTPKLKNPTLANLKI 554
Query: 884 EAV-------KGFKFQARRPQNTGMIKVTKESLLGWLQRK 982
EAV FQ RRP +K+T++SL WL RK
Sbjct: 555 EAVPAEDALPTSMGFQTRRPGILVRLKITRKSLYSWLHRK 594
Score = 60.5 bits (145), Expect = 1e-06
Identities = 46/188 (24%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Frame = +2
Query: 5 FNILMKACG--SDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQ 178
+ ++ ACG D+ +++ + +++ +TPN +++L++ AH+LS + ++ MQ
Sbjct: 9 YRAIIDACGLCRDYMKSRYIYEDLLNQKITPNIYVFNSLMNVN--AHDLSYTLNLYQNMQ 66
Query: 179 DGGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRY----QIQPNLVTYNTMLRARDKY 346
+ G+K D+ +Y +K C + +A +Y E+K Q++ ++ TY+T+++ +
Sbjct: 67 NLGLKPDMTSYNILLKGCCVAGRVDLAQDIYRELKHLESVGQLKLDVFTYSTIIKV---F 123
Query: 347 GSFVEVQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNS 526
Q L I QDM +G N LI L Q + G E N+
Sbjct: 124 ADARLWQMALTIKQDMLSAGVSLNIVAWSSLINACAHAGLVEQAIQLFEEMLLAGREPNT 183
Query: 527 RKCNNLLL 550
+C N++L
Sbjct: 184 -QCFNIIL 190
>gb|AFW88748.1| hypothetical protein ZEAMMB73_433087 [Zea mays]
gi|413956100|gb|AFW88749.1| hypothetical protein
ZEAMMB73_433087 [Zea mays]
Length = 487
Score = 319 bits (818), Expect = 1e-84
Identities = 176/330 (53%), Positives = 228/330 (69%), Gaps = 3/330 (0%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+NILMKACG++ RAK+ M+EM+ GL P+ ISWS LID YG++ N GA+QA R MQ
Sbjct: 155 TYNILMKACGTNAERAKSTMNEMRRNGLCPDLISWSILIDIYGSSQNRDGAVQALRRMQR 214
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
GM+L+V+AYT AIKACVENK+L++A L+EEMK +Q++PNLVTY T+L AR YGS E
Sbjct: 215 VGMRLNVSAYTVAIKACVENKDLKLALHLFEEMKTHQLKPNLVTYKTLLAARINYGSLQE 274
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNSRKCNN 541
VQQCLAIYQ+MRK+G+++NDYYLKELI EWCEGVL S+ + D ET ++ N
Sbjct: 275 VQQCLAIYQEMRKAGFQANDYYLKELIVEWCEGVLSSRSDNQDFYNLDLQPETERKESFN 334
Query: 542 LLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMIIIT- 718
L LEKV L++D Q +D+RGL+K+EARIVVLSVLR IKE YLLG+ +QDD++IIT
Sbjct: 335 LFLEKVVTVLQKDTDQNQIVDVRGLSKVEARIVVLSVLRKIKEQYLLGRVVQDDVVIITG 394
Query: 719 -DVVDKGAARTLTSHNLDVQRCIVKVLQEDLSFDVRTGHGALDDPFSKPSTVLRPPEAVK 895
+ A T TS +DV + IV VL +DL +V G G+ SKP + ++
Sbjct: 395 HEKTSTTEAETTTS-AVDVVQAIVTVLTDDLGLEVLIGPGSCPPVSSKPKAPTKSRSNLE 453
Query: 896 GF-KFQARRPQNTGMIKVTKESLLGWLQRK 982
K RRPQ GMIK+ SL WL++K
Sbjct: 454 QISKEFTRRPQ--GMIKIPINSLNHWLRKK 481
>ref|XP_006428907.1| hypothetical protein CICLE_v10011055mg [Citrus clementina]
gi|568853887|ref|XP_006480569.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Citrus sinensis]
gi|557530964|gb|ESR42147.1| hypothetical protein
CICLE_v10011055mg [Citrus clementina]
Length = 850
Score = 317 bits (812), Expect = 6e-84
Identities = 169/334 (50%), Positives = 234/334 (70%), Gaps = 7/334 (2%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+NILMKAC +D+YR KALMDEM+T+GL+PNHISW+ LID+ G + N+ GA+Q + M++
Sbjct: 517 TYNILMKACCTDYYRVKALMDEMRTVGLSPNHISWTILIDACGGSGNVEGALQILKIMRE 576
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
GM DV AYTTAIK CV +K L++A+SL+EEMK YQIQPNLVTY T+LRAR +YGS E
Sbjct: 577 DGMSPDVVAYTTAIKVCVRSKRLKLAFSLFEEMKHYQIQPNLVTYITLLRARSRYGSLHE 636
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNSRKCNN 541
VQQCLA+YQDM K+GY++ND YLKE+IEEWCEGV+ Q ++ TNS++ +
Sbjct: 637 VQQCLAVYQDMWKAGYKANDTYLKEVIEEWCEGVI--QDKNQNQGEVTLCRRTNSQRPQS 694
Query: 542 LLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMIII-- 715
LLLEKVA+HL++ + AID++GLTK+EARIVVL+VL+M+KE+Y LG ++DD++I+
Sbjct: 695 LLLEKVAVHLQKSAAENLAIDLQGLTKVEARIVVLAVLQMMKENYSLGVPVKDDLMIVLG 754
Query: 716 TDVVDKGAARTLTSHNLDVQRCIVKVLQEDLSFDVRTGHGALDDPFSKPSTVLRPPEAVK 895
+ V+K A+ H+L+V+ I K+LQ+DL V ++ + +L +
Sbjct: 755 PNKVNKIQAK----HDLEVKDAITKLLQDDLGLKVFLDGPSIQHKNAHMQKLLDSESNMA 810
Query: 896 -----GFKFQARRPQNTGMIKVTKESLLGWLQRK 982
K RRP+ +KV K+SL WLQR+
Sbjct: 811 KTLHIELKSSTRRPKILQRLKVPKKSLHHWLQRR 844
Score = 65.9 bits (159), Expect = 3e-08
Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 6/184 (3%)
Frame = +2
Query: 14 LMKACG--SDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQDGG 187
++ CG D+ +++A+ +++++ +T N +++L++ AH+L ++ ++ MQ G
Sbjct: 262 IIDVCGLCGDYMKSRAIYEDLRSQNVTLNIYVFNSLMNVN--AHDLKFTLEVYKNMQKLG 319
Query: 188 MKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQ----IQPNLVTYNTMLRARDKYGSF 355
+ D+A+Y +KAC N +A +Y E+K + ++ ++ TY+T+++ +
Sbjct: 320 VMADMASYNILLKACCLAGNTVLAQEIYGEVKHLEAKGVLKLDVFTYSTIVKV---FADA 376
Query: 356 VEVQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNSRKC 535
Q L + +DM +G N LI L Q +R G E NS+ C
Sbjct: 377 KWWQMALKVKEDMLSAGVTPNTITWSSLINACANAGLVEQAMHLFEEMRQAGCEPNSQCC 436
Query: 536 NNLL 547
N LL
Sbjct: 437 NILL 440
>ref|XP_002326162.1| predicted protein [Populus trichocarpa]
Length = 828
Score = 316 bits (810), Expect = 1e-83
Identities = 175/332 (52%), Positives = 233/332 (70%), Gaps = 5/332 (1%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+++LMKACGSD++RAKALMDEMKT+G++PNHISWS LID G + N+SGA+Q + M+
Sbjct: 514 TYHMLMKACGSDYHRAKALMDEMKTVGISPNHISWSILIDICGVSGNVSGAVQILKNMRM 573
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
G++ DV AYTTAIK CVE KNL++A+SL+ EMKR QI PNLVTYNT+LRAR +YGS E
Sbjct: 574 AGVEPDVVAYTTAIKVCVETKNLKLAFSLFAEMKRCQINPNLVTYNTLLRARTRYGSLRE 633
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVL--CSQCQSHKLPIRDTGNETNSRKC 535
VQQCLAIYQDMRK+GY+SNDYYLK+LIEEWCEGV+ +Q Q + T+ +
Sbjct: 634 VQQCLAIYQDMRKAGYKSNDYYLKQLIEEWCEGVIQDNNQIQGGFASCK----RTDLGRP 689
Query: 536 NNLLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMIII 715
+LLLEKVA HL+ +I + AID++GLTK+EARIVVL+VLRMIKE+Y LG ++++DM I
Sbjct: 690 RSLLLEKVAAHLQNNISENLAIDLQGLTKVEARIVVLAVLRMIKENYTLGYSVKEDMWIT 749
Query: 716 TDV--VDKGAARTLTSHNLDVQRCIVKVLQEDLSFDVRTG-HGALDDPFSKPSTVLRPPE 886
DV VD + R + +V+ I+++L+ +L +V G LDD
Sbjct: 750 LDVSKVDPASKR-----DSEVKNAIIELLRNELGLEVLVAVPGHLDD------------- 791
Query: 887 AVKGFKFQARRPQNTGMIKVTKESLLGWLQRK 982
+K + P T +KV ++SL WLQR+
Sbjct: 792 -IKTDSKSSLDPVVTQRLKVRRKSLHEWLQRR 822
>ref|XP_006381507.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550336211|gb|ERP59304.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 828
Score = 316 bits (809), Expect = 1e-83
Identities = 175/332 (52%), Positives = 233/332 (70%), Gaps = 5/332 (1%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+++LMKACGSD++RAKALMDEMKT+G++PNHISWS LID G + N+SGA+Q + M+
Sbjct: 514 TYHMLMKACGSDYHRAKALMDEMKTVGISPNHISWSILIDICGVSGNVSGAVQILKNMRL 573
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
G++ DV AYTTAIK CVE KNL++A+SL+ EMKR QI PNLVTYNT+LRAR +YGS E
Sbjct: 574 AGVEPDVVAYTTAIKVCVETKNLKLAFSLFAEMKRCQINPNLVTYNTLLRARTRYGSLRE 633
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVL--CSQCQSHKLPIRDTGNETNSRKC 535
VQQCLAIYQDMRK+GY+SNDYYLK+LIEEWCEGV+ +Q Q + T+ +
Sbjct: 634 VQQCLAIYQDMRKAGYKSNDYYLKQLIEEWCEGVIQDNNQIQGGFASCK----RTDLGRP 689
Query: 536 NNLLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMIII 715
+LLLEKVA HL+ +I + AID++GLTK+EARIVVL+VLRMIKE+Y LG ++++DM I
Sbjct: 690 RSLLLEKVAAHLQNNISENLAIDLQGLTKVEARIVVLAVLRMIKENYTLGYSVKEDMWIT 749
Query: 716 TDV--VDKGAARTLTSHNLDVQRCIVKVLQEDLSFDVRTG-HGALDDPFSKPSTVLRPPE 886
DV VD + R + +V+ I+++L+ +L +V G LDD
Sbjct: 750 LDVSKVDPASKR-----DSEVKNAIIELLRNELGLEVLVAVPGHLDD------------- 791
Query: 887 AVKGFKFQARRPQNTGMIKVTKESLLGWLQRK 982
+K + P T +KV ++SL WLQR+
Sbjct: 792 -IKTDSKSSLDPVVTQRLKVRRKSLHEWLQRR 822
>ref|XP_002465430.1| hypothetical protein SORBIDRAFT_01g038770 [Sorghum bicolor]
gi|241919284|gb|EER92428.1| hypothetical protein
SORBIDRAFT_01g038770 [Sorghum bicolor]
Length = 821
Score = 314 bits (805), Expect = 4e-83
Identities = 171/328 (52%), Positives = 227/328 (69%), Gaps = 1/328 (0%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+NILMKACG++ RAK++M+EM+ GL P+ ISWS L+D YG + N GA+QA R MQ
Sbjct: 493 TYNILMKACGTNAERAKSVMNEMRRNGLCPDLISWSILMDIYGTSQNRDGAVQALRRMQR 552
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
GM+L+V+AYT AIKACVENK+L++A L+EEMK +Q++PNLVTY T+L AR YGS +E
Sbjct: 553 VGMRLNVSAYTVAIKACVENKDLKLALHLFEEMKTHQLKPNLVTYKTLLAARSNYGSLLE 612
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNSRKCNN 541
VQQCLAIYQ+MRK+GY++NDYYLKELI EWCEGVL S+ + D + ++ N
Sbjct: 613 VQQCLAIYQEMRKAGYQANDYYLKELIMEWCEGVLSSRGDNQDFYNLDL--QPKRKESFN 670
Query: 542 LLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMIIITD 721
L LEKV L++D Q +D+RGL+K+EARIVVLSVLR IKE YLLG+ +QDD++IIT
Sbjct: 671 LFLEKVVTVLQKDTDQNQTVDVRGLSKVEARIVVLSVLRKIKEQYLLGRVVQDDVVIITG 730
Query: 722 VVDKGAARTLTSHNLDVQRCIVKVLQEDLSFDVRTGHGALDDPFSKPSTVLRPPEAVKGF 901
+K + ++ +DV + IV VL DL +V G G+ SKP + ++
Sbjct: 731 -HEKTSRTEAETNAVDVVQAIVTVLTTDLGLEVLIGPGSCPPVSSKPKATTKSRSNLEQV 789
Query: 902 -KFQARRPQNTGMIKVTKESLLGWLQRK 982
K RRPQ GMIK+ SL WL++K
Sbjct: 790 SKEFTRRPQ--GMIKIPLNSLNHWLKKK 815
>ref|XP_006577707.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Glycine max]
Length = 597
Score = 313 bits (802), Expect = 9e-83
Identities = 172/336 (51%), Positives = 230/336 (68%), Gaps = 9/336 (2%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+ IL+K CG+D+Y AKAL+ EM+T+GL+PN ISWS LID GA+ N+ GA++ + M D
Sbjct: 268 TYYILLKPCGTDYYHAKALIKEMETVGLSPNQISWSILIDICGASANVEGAIEILKTMGD 327
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
G+K V AYTTA+K CVE+KN A +LYEEMK Y+I+P+ VTYNT+L+AR KYGS E
Sbjct: 328 AGIKPGVIAYTTAMKVCVESKNFMQALTLYEEMKCYEIRPSWVTYNTLLKARSKYGSLHE 387
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNSRKCNN 541
VQQCLAIYQDMRK+GY+ NDYYL+ELIEEWCEGV+ Q K + N++ S + ++
Sbjct: 388 VQQCLAIYQDMRKAGYKPNDYYLEELIEEWCEGVI--QDNREKQGEFSSSNKSESERPHS 445
Query: 542 LLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMIIITD 721
LLLEK+A HL + + D AID++GLTK+EA +VVL+VLRMIKE+Y LG ++ DD++II
Sbjct: 446 LLLEKIAAHLLKRVADILAIDVQGLTKVEAHLVVLAVLRMIKENYSLGHSVNDDILIIIG 505
Query: 722 V--VDKGAARTLTSHNLDVQRCIVKVLQEDLSFDV---RTGHGALDD-PFSKPSTVLRPP 883
VD+ ++ H L+VQ I+K+L+ +L +V RT D P+
Sbjct: 506 ATKVDENPSK----HILEVQEAIIKLLRNELELEVFPARTRLALCDTAKLEYPNRSNLNI 561
Query: 884 EAVKG---FKFQARRPQNTGMIKVTKESLLGWLQRK 982
EA+ G FQ RRP +KVTK+SL WL RK
Sbjct: 562 EALPGENALGFQTRRPGVLVRLKVTKKSLYSWLHRK 597
Score = 58.2 bits (139), Expect = 7e-06
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 9/205 (4%)
Frame = +2
Query: 5 FNILMKACG--SDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQ 178
+ + ACG D+ +++ + +++ +TPN +++L++ +H+LS + ++ MQ
Sbjct: 16 YRATIDACGLCRDYMKSRHIYEDLHNQNITPNIYVFNSLMNVN--SHDLSYTLNLYQNMQ 73
Query: 179 DGGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRY----QIQPNLVTYNTMLRARDKY 346
+ G+K D+ +Y +KAC + + +Y E+K Q++ +++TY+T+++
Sbjct: 74 NLGLKPDMTSYNILLKACCVAGRVDLTQGIYRELKHLESVGQLKLDVLTYSTIIKV---- 129
Query: 347 GSFVEV---QQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNE 517
F +V Q L I QDM +G N L L Q + G E
Sbjct: 130 --FADVKLWQMALKIKQDMLSAGVSLNIVAWSSLSNACAHAGLVEQAIQLFEEMLLAGCE 187
Query: 518 TNSRKCNNLLLEKVALHLRRDIGDR 592
N+ +C N++L + D G R
Sbjct: 188 PNT-QCFNIILNACVEAYQYDRGFR 211
>ref|XP_006651267.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Oryza brachyantha]
Length = 811
Score = 311 bits (798), Expect = 3e-82
Identities = 174/328 (53%), Positives = 229/328 (69%), Gaps = 1/328 (0%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+NILMKACG++ RAK++M+EM+ GL P+ ISWS L++ YG++ N GA+QA R MQ
Sbjct: 487 TYNILMKACGTNGERAKSVMNEMRRNGLCPDLISWSILMNIYGSSQNRDGAIQALRRMQR 546
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
GMKL+V AYT AIKACVENK L++A L+EEMK Q++PNLVTY T+L AR+KYGS E
Sbjct: 547 VGMKLNVTAYTVAIKACVENKGLKLALHLFEEMKAQQLKPNLVTYRTLLTARNKYGSLQE 606
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNSRKCNN 541
VQQCLAIYQ+MRK+GY++NDYYLK LI EWCEGVL S + +L D E+
Sbjct: 607 VQQCLAIYQEMRKAGYQANDYYLKNLIVEWCEGVLSSGNGNRELYQLDQRKES-----FK 661
Query: 542 LLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMIIITD 721
L+LEKV L++D+ Q +D+RGL+K+EARIVVLSVLR IKE Y+LG+A+QDD++IIT
Sbjct: 662 LVLEKVTTFLQKDVDQNQTVDVRGLSKVEARIVVLSVLRKIKEKYILGRAVQDDVVIITG 721
Query: 722 VVDKGAARTLTSHNLDVQRCIVKVLQEDLSFDVRTGHGALDDPFSKPSTVLRPPEAV-KG 898
+ + TS +DV+ IV VL ++L +V G G+ SKP+ R + +
Sbjct: 722 NGKASSTKAETS-VVDVEHAIVAVLTDELGLEVLIGPGS-RPASSKPTVPARSRSHLDQA 779
Query: 899 FKFQARRPQNTGMIKVTKESLLGWLQRK 982
K +RRPQ GMIK+ SL WL+RK
Sbjct: 780 SKHFSRRPQ--GMIKIPINSLNHWLKRK 805
>ref|XP_004493936.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Cicer arietinum]
Length = 799
Score = 311 bits (798), Expect = 3e-82
Identities = 164/332 (49%), Positives = 227/332 (68%), Gaps = 5/332 (1%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+N L+KACG+++Y AKAL++EMKT+GL+PN ISWS LI+ G + N+ GA++ R M D
Sbjct: 473 TYNTLLKACGTNYYHAKALINEMKTVGLSPNQISWSILINICGGSENVEGAIEILRTMID 532
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
G+K DV AYTTAIK CVE+KN A +LYEEMK Y+ QPNLVTYNT+LRAR KYGS E
Sbjct: 533 AGVKPDVVAYTTAIKVCVESKNFTKALTLYEEMKSYETQPNLVTYNTLLRARSKYGSLRE 592
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNSRKCNN 541
VQQCLAIYQDMRK+GY+ NDYYL+ELIEEWCEGV+ + +++ + + + +
Sbjct: 593 VQQCLAIYQDMRKAGYKPNDYYLEELIEEWCEGVI-QDNEEYEVEF-SSSKKPEIERPES 650
Query: 542 LLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMIIITD 721
LLLEK+A HL + + D AID++GL+K+EAR+V+L+VLRMIKE+Y G ++ DD++II
Sbjct: 651 LLLEKIAAHLLKRVADILAIDVQGLSKVEARLVILAVLRMIKENYAFGHSVNDDILIIIG 710
Query: 722 V--VDKGAARTLTSHNLDVQRCIVKVLQEDLSFD---VRTGHGALDDPFSKPSTVLRPPE 886
D+ A+ + L+VQ ++K+L+ +L + +T D P + + P
Sbjct: 711 ATKADESPAKEI----LEVQEAVIKLLRNELGLEALPAKTRFAPSDSPKLQNTKENALPT 766
Query: 887 AVKGFKFQARRPQNTGMIKVTKESLLGWLQRK 982
+ F RRP +KVTK+SL WLQR+
Sbjct: 767 TM---VFHTRRPAVLQRLKVTKQSLHRWLQRR 795
Score = 59.7 bits (143), Expect = 2e-06
Identities = 45/188 (23%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Frame = +2
Query: 5 FNILMKACG--SDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQ 178
+ ++ CG DF +++ + +++ +TPN +++L+++ AH++S + ++ MQ
Sbjct: 220 YRAIIDVCGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNAN--AHDISYTLNLYQNMQ 277
Query: 179 DGGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRY----QIQPNLVTYNTMLRARDKY 346
G+K D+ +Y +KAC + +A +Y+E+K Q++ ++ TY+T+++ +
Sbjct: 278 KVGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESIGQLKLDVFTYSTIIKV---F 334
Query: 347 GSFVEVQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNS 526
Q L I DM +G N LI L Q + +G E N+
Sbjct: 335 ADAKLWQMALKIKHDMLLAGVSLNTVAWSSLINACAHAGLVEQAIQLFEEMLLSGCEPNT 394
Query: 527 RKCNNLLL 550
+C N++L
Sbjct: 395 -QCFNIIL 401
>ref|NP_001049766.1| Os03g0284900 [Oryza sativa Japonica Group]
gi|108707551|gb|ABF95346.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|108707553|gb|ABF95348.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|113548237|dbj|BAF11680.1| Os03g0284900 [Oryza sativa
Japonica Group] gi|215686909|dbj|BAG90779.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 819
Score = 311 bits (798), Expect = 3e-82
Identities = 173/328 (52%), Positives = 230/328 (70%), Gaps = 1/328 (0%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+NILMKACG++ RAK++M+EM+ GL P+ ISWS L+D YG++ N GA+QA R MQ
Sbjct: 495 TYNILMKACGTNGERAKSVMNEMRRNGLCPDLISWSILMDIYGSSQNRDGAIQALRRMQR 554
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
GMKL+V AYT AIKACVENK+L++A L+EEMK +Q++PNLVTY T+L AR+KYGS E
Sbjct: 555 VGMKLNVTAYTVAIKACVENKDLKLALHLFEEMKAHQLKPNLVTYKTLLTARNKYGSLQE 614
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNSRKCNN 541
VQQCLAIYQ+MRK+GY++NDYYLK LI EWCEGVL S + + D E+
Sbjct: 615 VQQCLAIYQEMRKAGYQANDYYLKNLIVEWCEGVLSSGNGNREYYQLDQRKES-----FK 669
Query: 542 LLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMIIITD 721
L+LEKV L++D+ Q +D+RGL+K+E+R+VVLSVLR IKE YLLG+A+QDD++IIT
Sbjct: 670 LVLEKVTTFLQKDVDQNQTVDVRGLSKVESRVVVLSVLRKIKEKYLLGRAVQDDVVIITG 729
Query: 722 VVDKGAARTLTSHNLDVQRCIVKVLQEDLSFDVRTGHGALDDPFSKPSTVLRPPEAVK-G 898
+A+ TS ++V+ IV VL ++L +V G G+ SKP+ R +
Sbjct: 730 HGKASSAKAETS-VVEVEHAIVAVLTDELGLEVLIGPGS-RPASSKPTVPARSRSHLDLA 787
Query: 899 FKFQARRPQNTGMIKVTKESLLGWLQRK 982
K +RRPQ GMIK+ SL WL+RK
Sbjct: 788 SKHFSRRPQ--GMIKIPINSLNHWLKRK 813
>gb|ABF95347.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
gi|215765857|dbj|BAG87554.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 451
Score = 311 bits (798), Expect = 3e-82
Identities = 173/328 (52%), Positives = 230/328 (70%), Gaps = 1/328 (0%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+NILMKACG++ RAK++M+EM+ GL P+ ISWS L+D YG++ N GA+QA R MQ
Sbjct: 127 TYNILMKACGTNGERAKSVMNEMRRNGLCPDLISWSILMDIYGSSQNRDGAIQALRRMQR 186
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
GMKL+V AYT AIKACVENK+L++A L+EEMK +Q++PNLVTY T+L AR+KYGS E
Sbjct: 187 VGMKLNVTAYTVAIKACVENKDLKLALHLFEEMKAHQLKPNLVTYKTLLTARNKYGSLQE 246
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNSRKCNN 541
VQQCLAIYQ+MRK+GY++NDYYLK LI EWCEGVL S + + D E+
Sbjct: 247 VQQCLAIYQEMRKAGYQANDYYLKNLIVEWCEGVLSSGNGNREYYQLDQRKES-----FK 301
Query: 542 LLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAIQDDMIIITD 721
L+LEKV L++D+ Q +D+RGL+K+E+R+VVLSVLR IKE YLLG+A+QDD++IIT
Sbjct: 302 LVLEKVTTFLQKDVDQNQTVDVRGLSKVESRVVVLSVLRKIKEKYLLGRAVQDDVVIITG 361
Query: 722 VVDKGAARTLTSHNLDVQRCIVKVLQEDLSFDVRTGHGALDDPFSKPSTVLRPPEAVK-G 898
+A+ TS ++V+ IV VL ++L +V G G+ SKP+ R +
Sbjct: 362 HGKASSAKAETS-VVEVEHAIVAVLTDELGLEVLIGPGS-RPASSKPTVPARSRSHLDLA 419
Query: 899 FKFQARRPQNTGMIKVTKESLLGWLQRK 982
K +RRPQ GMIK+ SL WL+RK
Sbjct: 420 SKHFSRRPQ--GMIKIPINSLNHWLKRK 445
>ref|XP_006828302.1| hypothetical protein AMTR_s00023p00232870 [Amborella trichopoda]
gi|548832949|gb|ERM95718.1| hypothetical protein
AMTR_s00023p00232870 [Amborella trichopoda]
Length = 855
Score = 311 bits (796), Expect = 4e-82
Identities = 169/342 (49%), Positives = 229/342 (66%), Gaps = 16/342 (4%)
Frame = +2
Query: 2 TFNILMKACGSDFYRAKALMDEMKTIGLTPNHISWSTLIDSYGAAHNLSGAMQAFRAMQD 181
T+NILMKACG+D+YRA+ALMDEMK GL+PNHISWS LID G ++N+ GA+QAF++M +
Sbjct: 517 TYNILMKACGTDYYRAQALMDEMKAGGLSPNHISWSILIDICGRSYNMKGAIQAFKSMYN 576
Query: 182 GGMKLDVAAYTTAIKACVENKNLRVAYSLYEEMKRYQIQPNLVTYNTMLRARDKYGSFVE 361
G+ DV AYTTAIKACV NK ++A+SL+EEMKR+++QPNLVTYNT+L AR +YGS E
Sbjct: 577 AGIIPDVVAYTTAIKACVGNKYFKMAFSLFEEMKRHRLQPNLVTYNTLLTARSRYGSLDE 636
Query: 362 VQQCLAIYQDMRKSGYRSNDYYLKELIEEWCEGVLCSQCQSHKLPIRDTGNETNSRKCN- 538
V QCLAIYQDMRK+GY SND +LKEL+EEWCEGV+ + + +E N KC+
Sbjct: 637 VLQCLAIYQDMRKAGYNSNDRFLKELLEEWCEGVISDKGK--------RWSELNIDKCDK 688
Query: 539 --------NLLLEKVALHLRRDIGDRQAIDIRGLTKIEARIVVLSVLRMIKESYLLGKAI 694
+LLLEKVA +L+ + + ID+RGLTK+EARI+VL+ LRM+KE+Y+LGK +
Sbjct: 689 GSEVYGPQSLLLEKVAAYLQENFAENLTIDLRGLTKVEARIIVLAKLRMLKENYILGKPV 748
Query: 695 QDDMIIITDVVDKGAARTLTSHNLDVQRCIVKVLQEDLSFDVRTGH--GALDDPFSKPST 868
+DDMIIIT + + L V+ +++VLQ +L V G G L + +
Sbjct: 749 RDDMIIIT--ANTRSNMDAAETELRVRDAVIRVLQGELGLSVLEGPELGELSTRHAHVIS 806
Query: 869 VLRPPEAVKGFK-----FQARRPQNTGMIKVTKESLLGWLQR 979
L P + + RRP + +K+ + SL WLQ+
Sbjct: 807 SLSPETLTMSKRPQLREYTTRRPVDVQRLKIPRRSLNLWLQK 848