BLASTX nr result

ID: Zingiber24_contig00029439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00029439
         (391 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002887766.1| hypothetical protein ARALYDRAFT_477076 [Arab...    55   1e-05

>ref|XP_002887766.1| hypothetical protein ARALYDRAFT_477076 [Arabidopsis lyrata subsp.
           lyrata] gi|297333607|gb|EFH64025.1| hypothetical protein
           ARALYDRAFT_477076 [Arabidopsis lyrata subsp. lyrata]
          Length = 382

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
 Frame = -1

Query: 391 RAPSCAIRWRELLRLKRAAGSKLGHENA--SAAASSIGSRKHFFHRNPKSPSVLDPAMSL 218
           +AP C+ RWR+LL LKR + +         S   SS  S K F HR+ +S S    A  L
Sbjct: 115 KAPRCSSRWRDLLGLKRFSQNSKAASTTIPSNPRSSTSSLKQFLHRSSRSSSSSSDASLL 174

Query: 217 PXXXXXXXXXXXXXXXXXXXXXXXSCAAGRDDEGLPHLSLDAEKPHHH 74
                                   S ++G D E +P LSLDAE+P+H+
Sbjct: 175 MSLPLLKDSDCESISISSSRMSLSSSSSGHDHEDIPRLSLDAERPNHN 222


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