BLASTX nr result

ID: Zingiber24_contig00029394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00029394
         (292 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001061853.1| Os08g0430100 [Oryza sativa Japonica Group] g...    62   6e-08
gb|EOY27078.1| DNA double-strand break repair rad50 ATPase isofo...    59   9e-07
gb|EOY27077.1| DNA double-strand break repair rad50 ATPase isofo...    59   9e-07
ref|XP_004238924.1| PREDICTED: uncharacterized protein LOC101253...    59   9e-07
gb|AFW64774.1| hypothetical protein ZEAMMB73_104223 [Zea mays]         57   2e-06
gb|AFW64773.1| hypothetical protein ZEAMMB73_104223 [Zea mays]         57   2e-06
ref|NP_001131756.1| myosin-like protein [Zea mays] gi|194692442|...    57   2e-06
ref|XP_006659420.1| PREDICTED: protein FLX-like 3-like [Oryza br...    57   2e-06
gb|ACG32914.1| myosin-like protein [Zea mays]                          56   4e-06
ref|XP_002282562.1| PREDICTED: uncharacterized protein LOC100242...    56   4e-06
ref|XP_006836237.1| hypothetical protein AMTR_s00101p00119280 [A...    56   6e-06

>ref|NP_001061853.1| Os08g0430100 [Oryza sativa Japonica Group]
           gi|38175471|dbj|BAD01168.1| myosin-like protein [Oryza
           sativa Japonica Group] gi|113623822|dbj|BAF23767.1|
           Os08g0430100 [Oryza sativa Japonica Group]
          Length = 268

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 36/62 (58%), Positives = 42/62 (67%), Gaps = 4/62 (6%)
 Frame = -3

Query: 182 MAGRNRIPRHLVNERSHGFRDGPP--LRRPVPVHPA--EEELALRHDEIRRLHTDNQLLM 15
           MAGR+RIPR   +ER  GFRDGPP  L R  P+ P   EEEL+ R  E+RR+H DNQ L 
Sbjct: 1   MAGRHRIPREYYDER-RGFRDGPPPPLARARPISPRRLEEELSSRRAEMRRIHDDNQRLA 59

Query: 14  DE 9
           DE
Sbjct: 60  DE 61


>gb|EOY27078.1| DNA double-strand break repair rad50 ATPase isoform 2 [Theobroma
           cacao]
          Length = 250

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
 Frame = -3

Query: 182 MAGRNRIPRHLVNER-----SHGFRDGPPLRRPVPVHPA--EEELALRHDEIRRLHTDNQ 24
           MAGRNRIPR   N+R        F  GPPL +P P HP   EEEL ++H EIRRL TDN+
Sbjct: 1   MAGRNRIPREAFNDRRGFPPERPFLRGPPLPQPPP-HPVLLEEELEMQHAEIRRLLTDNR 59

Query: 23  LLMDENI 3
            L+++ +
Sbjct: 60  RLVEDRM 66


>gb|EOY27077.1| DNA double-strand break repair rad50 ATPase isoform 1 [Theobroma
           cacao]
          Length = 275

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
 Frame = -3

Query: 182 MAGRNRIPRHLVNER-----SHGFRDGPPLRRPVPVHPA--EEELALRHDEIRRLHTDNQ 24
           MAGRNRIPR   N+R        F  GPPL +P P HP   EEEL ++H EIRRL TDN+
Sbjct: 1   MAGRNRIPREAFNDRRGFPPERPFLRGPPLPQPPP-HPVLLEEELEMQHAEIRRLLTDNR 59

Query: 23  LLMDENI 3
            L+++ +
Sbjct: 60  RLVEDRM 66


>ref|XP_004238924.1| PREDICTED: uncharacterized protein LOC101253185 [Solanum
           lycopersicum]
          Length = 262

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 9/69 (13%)
 Frame = -3

Query: 182 MAGRNRIPRHLVNERSHGFRDGPPLRR-------PVPVHPA--EEELALRHDEIRRLHTD 30
           MAGRNR+PR   N R  GF DGPP R        PVP HP+  EEEL L+H +++RL  +
Sbjct: 1   MAGRNRMPRQPDNFR--GFHDGPPPRGIMQRGPGPVPPHPSVLEEELELQHRDMQRLIAE 58

Query: 29  NQLLMDENI 3
           N+ ++DEN+
Sbjct: 59  NRQVIDENV 67


>gb|AFW64774.1| hypothetical protein ZEAMMB73_104223 [Zea mays]
          Length = 233

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
 Frame = -3

Query: 182 MAGRNRIPRHLVNERSHGFRDGPP--LRRPVPVHPAE--EELALRHDEIRRLHTDNQLLM 15
           MAGR+R PR   +E   G+RDGPP  L RP P+ P    EEL+ R  EIRR+H DNQ L 
Sbjct: 1   MAGRHRAPRQYHDE-PRGYRDGPPPPLPRPRPLSPRRMAEELSRRRAEIRRIHEDNQRLA 59

Query: 14  DE 9
           DE
Sbjct: 60  DE 61


>gb|AFW64773.1| hypothetical protein ZEAMMB73_104223 [Zea mays]
          Length = 179

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
 Frame = -3

Query: 182 MAGRNRIPRHLVNERSHGFRDGPP--LRRPVPVHPAE--EELALRHDEIRRLHTDNQLLM 15
           MAGR+R PR   +E   G+RDGPP  L RP P+ P    EEL+ R  EIRR+H DNQ L 
Sbjct: 1   MAGRHRAPRQYHDE-PRGYRDGPPPPLPRPRPLSPRRMAEELSRRRAEIRRIHEDNQRLA 59

Query: 14  DE 9
           DE
Sbjct: 60  DE 61


>ref|NP_001131756.1| myosin-like protein [Zea mays] gi|194692442|gb|ACF80305.1| unknown
           [Zea mays] gi|223942349|gb|ACN25258.1| unknown [Zea
           mays] gi|413924843|gb|AFW64775.1| myosin-like protein
           [Zea mays]
          Length = 272

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
 Frame = -3

Query: 182 MAGRNRIPRHLVNERSHGFRDGPP--LRRPVPVHPAE--EELALRHDEIRRLHTDNQLLM 15
           MAGR+R PR   +E   G+RDGPP  L RP P+ P    EEL+ R  EIRR+H DNQ L 
Sbjct: 1   MAGRHRAPRQYHDE-PRGYRDGPPPPLPRPRPLSPRRMAEELSRRRAEIRRIHEDNQRLA 59

Query: 14  DE 9
           DE
Sbjct: 60  DE 61


>ref|XP_006659420.1| PREDICTED: protein FLX-like 3-like [Oryza brachyantha]
          Length = 268

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
 Frame = -3

Query: 182 MAGRNRIPRHLVNERSHGFRDGPP--LRRPVPVHPA--EEELALRHDEIRRLHTDNQLLM 15
           MAGR+RIPR   +E   GFRDGPP  L RP P+ P   EE+L+ R  + RR+  DNQ L 
Sbjct: 1   MAGRHRIPREYYDE-PRGFRDGPPPPLARPRPISPRRLEEQLSSRRADTRRIRDDNQRLA 59

Query: 14  DE 9
           DE
Sbjct: 60  DE 61


>gb|ACG32914.1| myosin-like protein [Zea mays]
          Length = 272

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
 Frame = -3

Query: 182 MAGRNRIPRHLVNERSHGFRDGPP--LRRPVPVHPAE--EELALRHDEIRRLHTDNQLLM 15
           MAGR+R PR   +E   G+RDGPP  L RP P+ P    EEL+ R  E+RR+H DNQ L 
Sbjct: 1   MAGRHRAPRQYHDE-PRGYRDGPPPPLPRPRPLSPRRMAEELSRRRAEMRRIHEDNQRLA 59

Query: 14  DE 9
           DE
Sbjct: 60  DE 61


>ref|XP_002282562.1| PREDICTED: uncharacterized protein LOC100242187 isoform 1 [Vitis
           vinifera] gi|147801663|emb|CAN76874.1| hypothetical
           protein VITISV_007099 [Vitis vinifera]
           gi|297737820|emb|CBI27021.3| unnamed protein product
           [Vitis vinifera]
          Length = 265

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 7/66 (10%)
 Frame = -3

Query: 182 MAGRNRIPRHLVNERSHGFRDGPP--LRR---PVPVHPA--EEELALRHDEIRRLHTDNQ 24
           MAGRNR+PR+    R  GFRDGPP  L R   P+P+HP   EEEL L+H E++R+  +N+
Sbjct: 1   MAGRNRMPRNPNGFR--GFRDGPPPVLNRGPGPLPLHPVAMEEELELQHRELQRIVAENR 58

Query: 23  LLMDEN 6
            ++D+N
Sbjct: 59  HVIDDN 64


>ref|XP_006836237.1| hypothetical protein AMTR_s00101p00119280 [Amborella trichopoda]
           gi|548838737|gb|ERM99090.1| hypothetical protein
           AMTR_s00101p00119280 [Amborella trichopoda]
          Length = 279

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 10/70 (14%)
 Frame = -3

Query: 182 MAGRNRIPRHLVNERSHGFRDGPP-------LRRPVPVHP---AEEELALRHDEIRRLHT 33
           M+GRNR PRH+V +   G+R GPP       +R P PV      EEEL ++H+EIRRL  
Sbjct: 1   MSGRNRGPRHMVEDGRRGYRPGPPGIHEGPFIRGPGPVPRPIILEEELEIQHEEIRRLVG 60

Query: 32  DNQLLMDENI 3
           DN+ L ++ +
Sbjct: 61  DNRRLAEDRM 70


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