BLASTX nr result
ID: Zingiber24_contig00029284
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00029284
(355 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-... 70 4e-10
ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-... 70 4e-10
ref|XP_006432556.1| hypothetical protein CICLE_v10000254mg [Citr... 68 1e-09
gb|ESW30149.1| hypothetical protein PHAVU_002G128800g [Phaseolus... 67 2e-09
ref|XP_002304377.2| hypothetical protein POPTR_0003s10170g [Popu... 67 2e-09
emb|CBI37456.3| unnamed protein product [Vitis vinifera] 67 2e-09
ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-... 67 2e-09
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera] 67 2e-09
gb|EMJ12292.1| hypothetical protein PRUPE_ppa001396mg [Prunus pe... 66 6e-09
ref|XP_004245920.1| PREDICTED: replication protein A 70 kDa DNA-... 65 9e-09
ref|XP_006364465.1| PREDICTED: replication protein A 70 kDa DNA-... 65 1e-08
gb|EEC78388.1| hypothetical protein OsI_18166 [Oryza sativa Indi... 62 6e-08
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 61 1e-07
ref|NP_001151792.1| DNA binding protein [Zea mays] gi|195649707|... 61 1e-07
gb|EOY25325.1| Replication factor A 1, rfa1, putative [Theobroma... 61 2e-07
ref|XP_004301636.1| PREDICTED: replication protein A 70 kDa DNA-... 60 2e-07
ref|XP_004512401.1| PREDICTED: replication protein A 70 kDa DNA-... 60 3e-07
gb|EMT33605.1| Replication protein A 70 kDa DNA-binding subunit ... 60 3e-07
gb|EMS59946.1| Replication protein A 70 kDa DNA-binding subunit ... 60 3e-07
gb|AFR97615.2| DNA topoisomerase III [Cryptococcus neoformans va... 60 4e-07
>ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cucumis sativus]
Length = 425
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/61 (52%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGY--------SSAGSNVCFKCHQPGHWASECPS 158
CN+CGG GHS NCP S PA SV GG S S CFKCHQ GHWA +CP
Sbjct: 350 CNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGTSGECFKCHQTGHWARDCPG 409
Query: 159 V 161
+
Sbjct: 410 L 410
>ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 861
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/61 (52%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGY--------SSAGSNVCFKCHQPGHWASECPS 158
CN+CGG GHS NCP S PA SV GG S S CFKCHQ GHWA +CP
Sbjct: 786 CNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGTSGECFKCHQTGHWARDCPG 845
Query: 159 V 161
+
Sbjct: 846 L 846
>ref|XP_006432556.1| hypothetical protein CICLE_v10000254mg [Citrus clementina]
gi|568834454|ref|XP_006471343.1| PREDICTED: replication
protein A 70 kDa DNA-binding subunit C-like [Citrus
sinensis] gi|557534678|gb|ESR45796.1| hypothetical
protein CICLE_v10000254mg [Citrus clementina]
Length = 858
Score = 67.8 bits (164), Expect = 1e-09
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 8/61 (13%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSS--------AGSNVCFKCHQPGHWASECPS 158
C++CG GHS NCP S P QS GGY++ A S+ C+KCH+ GHWA +CPS
Sbjct: 768 CSSCGAVGHSSMNCPSIMSGPGQSSGGGYANSFSSGAGIAASSECYKCHKTGHWARDCPS 827
Query: 159 V 161
+
Sbjct: 828 L 828
>gb|ESW30149.1| hypothetical protein PHAVU_002G128800g [Phaseolus vulgaris]
Length = 866
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/60 (48%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSS---------AGSNVCFKCHQPGHWASECP 155
C NCGG GH+ CP + P QS GG+S+ S CFKCHQPGHWA +CP
Sbjct: 777 CTNCGGSGHTSMLCPNIRNLPGQSSGGGFSNRASYGGSGGGASGECFKCHQPGHWARDCP 836
>ref|XP_002304377.2| hypothetical protein POPTR_0003s10170g [Populus trichocarpa]
gi|550342884|gb|EEE79356.2| hypothetical protein
POPTR_0003s10170g [Populus trichocarpa]
Length = 854
Score = 67.4 bits (163), Expect = 2e-09
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGY----SSAGSNVCFKCHQPGHWASECPSV 161
CN+CG HS NCP + P QS+ G Y S G+ C+KCHQ GHWA +CP +
Sbjct: 781 CNSCGATSHSSANCPSMVNAPGQSMGGSYANRTSQGGTGECYKCHQVGHWARDCPGL 837
>emb|CBI37456.3| unnamed protein product [Vitis vinifera]
Length = 754
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSAGS---------NVCFKCHQPGHWASECP 155
CN+CGG GHS NCP P QS GGY S S C+KCHQ GHWA +CP
Sbjct: 614 CNSCGGTGHSSSNCPSVMHSPRQSSGGGYVSRASTGPSAGGTTGECYKCHQFGHWARDCP 673
Query: 156 SV 161
+
Sbjct: 674 GL 675
>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Vitis vinifera]
Length = 882
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSAGS---------NVCFKCHQPGHWASECP 155
CN+CGG GHS NCP P QS GGY S S C+KCHQ GHWA +CP
Sbjct: 793 CNSCGGTGHSSSNCPSVMHSPRQSSGGGYVSRASTGPSAGGTTGECYKCHQFGHWARDCP 852
Query: 156 SV 161
+
Sbjct: 853 GL 854
>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
Length = 882
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSAGS---------NVCFKCHQPGHWASECP 155
CN+CGG GHS NCP P QS GGY S S C+KCHQ GHWA +CP
Sbjct: 793 CNSCGGTGHSSSNCPSVMHSPRQSSGGGYVSRASTGPSAGGTTGECYKCHQFGHWARDCP 852
Query: 156 SV 161
+
Sbjct: 853 GL 854
>gb|EMJ12292.1| hypothetical protein PRUPE_ppa001396mg [Prunus persica]
Length = 838
Score = 65.9 bits (159), Expect = 6e-09
Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 9/62 (14%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSAGSNV---------CFKCHQPGHWASECP 155
CN+CG GHS NCP + P QS GY++ S+ C+KCHQPGHWA +CP
Sbjct: 750 CNSCGDAGHSSMNCPSVMNGPGQSSGAGYNNRVSSRPGVGNTSGDCYKCHQPGHWARDCP 809
Query: 156 SV 161
+
Sbjct: 810 GL 811
>ref|XP_004245920.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Solanum lycopersicum]
Length = 899
Score = 65.1 bits (157), Expect = 9e-09
Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGY---------SSAGSNVCFKCHQPGHWASECP 155
CN+CGG GHS NCP S +Q+ G+ S G C+KCHQ GHWA +CP
Sbjct: 813 CNSCGGTGHSASNCPSMMSGQSQAYGSGFGNRATSGMSSGGGGGECYKCHQYGHWARDCP 872
Query: 156 SV 161
V
Sbjct: 873 GV 874
>ref|XP_006364465.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like
[Solanum tuberosum]
Length = 905
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 13/66 (19%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSS-------------AGSNVCFKCHQPGHWA 143
CN+CGG GHS NCP S +Q+ GG+ + G C+KCHQ GHWA
Sbjct: 815 CNSCGGTGHSASNCPSMMSGQSQAYGGGFGNRATSGMSSGGGGGGGGGECYKCHQYGHWA 874
Query: 144 SECPSV 161
+CP V
Sbjct: 875 RDCPGV 880
>gb|EEC78388.1| hypothetical protein OsI_18166 [Oryza sativa Indica Group]
Length = 988
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSA---------GSNVCFKCHQPGHWASECP 155
CN CG +GHS QNC +G Q S G SS GS+ C+KC QPGH+A +CP
Sbjct: 853 CNICGANGHSAQNCHVGADMDMQETSAGGSSMGNYNSIAGNGSSECYKCKQPGHYARDCP 912
>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355513943|gb|AES95566.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/59 (45%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGY------SSAGSNVCFKCHQPGHWASECPSV 161
C+NCGG HS C + P Q+ G Y S S C+KC QPGHWAS CPS+
Sbjct: 785 CSNCGGSDHSSAQCLHLRNPPEQTAGGAYVNTVSGSGGASGKCYKCQQPGHWASNCPSM 843
Score = 55.5 bits (132), Expect = 7e-06
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSAGSNVCFKCHQPGHWASECPSV 161
C C GH NCP + A VSGG A N C+KC+QPGHWA+ CP++
Sbjct: 827 CYKCQQPGHWASNCP--SMSAANRVSGGSGGASGN-CYKCNQPGHWANNCPNM 876
>ref|NP_001151792.1| DNA binding protein [Zea mays] gi|195649707|gb|ACG44321.1| DNA
binding protein [Zea mays] gi|223945267|gb|ACN26717.1|
unknown [Zea mays] gi|413942327|gb|AFW74976.1| DNA
binding protein [Zea mays]
Length = 876
Score = 61.2 bits (147), Expect = 1e-07
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSG----GYSSAGSNVCFKCHQPGHWASECP 155
C +CG GH+ QNCP GT R + S G S + +CFKC+QPGH+A+ CP
Sbjct: 788 CVSCGSSGHNVQNCPAGTYRQQAAASAASSYGTSQPRNGLCFKCNQPGHFANSCP 842
>gb|EOY25325.1| Replication factor A 1, rfa1, putative [Theobroma cacao]
Length = 911
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 9/60 (15%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSV----SGGYSSAGS-----NVCFKCHQPGHWASECP 155
CN+CG GHS NCP + PAQS+ +G SS S + C+KCHQ GHWA +CP
Sbjct: 825 CNSCGVTGHSSTNCPTFMNGPAQSMGRDCTGRISSEASVGRTSDECYKCHQSGHWAKDCP 884
>ref|XP_004301636.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Fragaria vesca subsp. vesca]
Length = 874
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSA-----GSNVCFKCHQPGHWASECP 155
CN CGG H+ NCP + QS G Y+++ S C+KCHQPGHWAS+CP
Sbjct: 795 CNICGGTSHNSLNCP---NVMKQSSGGSYANSRPVASNSGECYKCHQPGHWASDCP 847
>ref|XP_004512401.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cicer arietinum]
Length = 917
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGY-------SSAGSNVCFKCHQPGHWASECPSV 161
C+NCG GHS C ++ QS Y S A S C+KCHQPGHWA +CP +
Sbjct: 788 CSNCGASGHSSAQCLNLRNQSGQSTGAAYGNRVSAGSGAASGDCYKCHQPGHWARDCPGM 847
>gb|EMT33605.1| Replication protein A 70 kDa DNA-binding subunit [Aegilops
tauschii]
Length = 877
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSS---------AGSNVCFKCHQPGHWASECP 155
C+ CG GHS QNCP Q + GY++ AGS +CFKC+QPGH++ +CP
Sbjct: 684 CSVCGSTGHSVQNCPAVAMDMQQPAASGYAASSYGSSPGDAGSGLCFKCNQPGHFSRDCP 743
>gb|EMS59946.1| Replication protein A 70 kDa DNA-binding subunit [Triticum urartu]
Length = 1001
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSS---------AGSNVCFKCHQPGHWASECP 155
C+ CG GHS QNCP Q + GY++ AGS +CFKC+QPGH++ +CP
Sbjct: 808 CSVCGSTGHSVQNCPAVAMDMQQPAASGYAASSYGSSPGDAGSGLCFKCNQPGHFSRDCP 867
>gb|AFR97615.2| DNA topoisomerase III [Cryptococcus neoformans var. grubii H99]
Length = 1021
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/53 (50%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 3 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSAG-SNVCFKCHQPGHWASECPS 158
C CG GH NCP T V G S G S CFKC+QPGHWAS CP+
Sbjct: 943 CYKCGEQGHWATNCPNNTCGGGVGVGAGGSGGGTSGDCFKCNQPGHWASNCPN 995