BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00029283
         (364 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-...    84   1e-14
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]    84   1e-14
ref|XP_002304377.2| hypothetical protein POPTR_0003s10170g [Popu...    82   1e-13
gb|EMJ12292.1| hypothetical protein PRUPE_ppa001396mg [Prunus pe...    81   1e-13
gb|ESW30149.1| hypothetical protein PHAVU_002G128800g [Phaseolus...    81   2e-13
ref|XP_004245920.1| PREDICTED: replication protein A 70 kDa DNA-...    81   2e-13
ref|XP_006364465.1| PREDICTED: replication protein A 70 kDa DNA-...    80   2e-13
ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-...    80   2e-13
ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-...    80   2e-13
ref|XP_006432556.1| hypothetical protein CICLE_v10000254mg [Citr...    79   6e-13
emb|CBI37456.3| unnamed protein product [Vitis vinifera]               77   2e-12
gb|EOY25325.1| Replication factor A 1, rfa1, putative [Theobroma...    74   3e-11
ref|XP_002519884.1| replication factor A 1, rfa1, putative [Rici...    71   1e-10
gb|AFR97615.2| DNA topoisomerase III [Cryptococcus neoformans va...    71   2e-10
ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-...    70   3e-10
gb|EPS68676.1| hypothetical protein M569_06091 [Genlisea aurea]        69   5e-10
ref|XP_004512401.1| PREDICTED: replication protein A 70 kDa DNA-...    68   1e-09
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    67   2e-09
ref|XP_004960524.1| PREDICTED: replication protein A 70 kDa DNA-...    66   5e-09
ref|XP_004301636.1| PREDICTED: replication protein A 70 kDa DNA-...    65   1e-08

>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Vitis vinifera]
          Length = 882

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 42/90 (46%), Positives = 49/90 (54%), Gaps = 13/90 (14%)
 Frame = +3

Query: 3    CNNCGGQGHSFQNCPIGTSRPAQSVGGGY-------SSAGANV--CFKCHQPGHWASECP 155
            CN+CGG GHS  NCP     P QS GGGY        SAG     C+KCHQ GHWA +CP
Sbjct: 793  CNSCGGTGHSSSNCPSVMHSPRQSSGGGYVSRASTGPSAGGTTGECYKCHQFGHWARDCP 852

Query: 156  GVGAVTSAYRGSGTS----GRFTRQNIGGF 233
            G+     AY  SG +      F +Q +GGF
Sbjct: 853  GLNTGPPAYGSSGVNSGSYSSFAKQRVGGF 882


>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
          Length = 882

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 42/90 (46%), Positives = 49/90 (54%), Gaps = 13/90 (14%)
 Frame = +3

Query: 3    CNNCGGQGHSFQNCPIGTSRPAQSVGGGY-------SSAGANV--CFKCHQPGHWASECP 155
            CN+CGG GHS  NCP     P QS GGGY        SAG     C+KCHQ GHWA +CP
Sbjct: 793  CNSCGGTGHSSSNCPSVMHSPRQSSGGGYVSRASTGPSAGGTTGECYKCHQFGHWARDCP 852

Query: 156  GVGAVTSAYRGSGTS----GRFTRQNIGGF 233
            G+     AY  SG +      F +Q +GGF
Sbjct: 853  GLNTGPPAYGSSGVNSGSYSSFAKQRVGGF 882


>ref|XP_002304377.2| hypothetical protein POPTR_0003s10170g [Populus trichocarpa]
            gi|550342884|gb|EEE79356.2| hypothetical protein
            POPTR_0003s10170g [Populus trichocarpa]
          Length = 854

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
 Frame = +3

Query: 3    CNNCGGQGHSFQNCPIGTSRPAQSVGGGY----SSAGANVCFKCHQPGHWASECPGVGAV 170
            CN+CG   HS  NCP   + P QS+GG Y    S  G   C+KCHQ GHWA +CPG+ + 
Sbjct: 781  CNSCGATSHSSANCPSMVNAPGQSMGGSYANRTSQGGTGECYKCHQVGHWARDCPGLSS- 839

Query: 171  TSAYRGSGTSGRFTRQNIGGF 233
                  SG  G  ++Q++GGF
Sbjct: 840  ------SGKMGGISKQHVGGF 854


>gb|EMJ12292.1| hypothetical protein PRUPE_ppa001396mg [Prunus persica]
          Length = 838

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 13/90 (14%)
 Frame = +3

Query: 3    CNNCGGQGHSFQNCPIGTSRPAQSVGGGYSSAGANV---------CFKCHQPGHWASECP 155
            CN+CG  GHS  NCP   + P QS G GY++  ++          C+KCHQPGHWA +CP
Sbjct: 750  CNSCGDAGHSSMNCPSVMNGPGQSSGAGYNNRVSSRPGVGNTSGDCYKCHQPGHWARDCP 809

Query: 156  GVGAVTSAYRGSGTS----GRFTRQNIGGF 233
            G+   T AY GSG +    G    Q +GGF
Sbjct: 810  GLN-TTPAYGGSGGNPVRYGGVANQRVGGF 838


>gb|ESW30149.1| hypothetical protein PHAVU_002G128800g [Phaseolus vulgaris]
          Length = 866

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 13/90 (14%)
 Frame = +3

Query: 3    CNNCGGQGHSFQNCPIGTSRPAQSVGGGYSS---------AGANVCFKCHQPGHWASECP 155
            C NCGG GH+   CP   + P QS GGG+S+           +  CFKCHQPGHWA +CP
Sbjct: 777  CTNCGGSGHTSMLCPNIRNLPGQSSGGGFSNRASYGGSGGGASGECFKCHQPGHWARDCP 836

Query: 156  GVGAVTSAYRGSGT-SGRF---TRQNIGGF 233
            G  A T++Y  + T  GR+     Q  GG+
Sbjct: 837  GSSAPTASYGSANTMQGRYGIAQNQQFGGY 866


>ref|XP_004245920.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Solanum lycopersicum]
          Length = 899

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
 Frame = +3

Query: 3    CNNCGGQGHSFQNCPIGTSRPAQSVGGGY---------SSAGANVCFKCHQPGHWASECP 155
            CN+CGG GHS  NCP   S  +Q+ G G+         S  G   C+KCHQ GHWA +CP
Sbjct: 813  CNSCGGTGHSASNCPSMMSGQSQAYGSGFGNRATSGMSSGGGGGECYKCHQYGHWARDCP 872

Query: 156  GVGAVTSAYR-GSGTSGRFTRQNIGGF 233
            GV    +A    SG  G   RQ++GGF
Sbjct: 873  GVSNAPAANNMTSGRYGNTPRQHVGGF 899


>ref|XP_006364465.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like
            [Solanum tuberosum]
          Length = 905

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/91 (42%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
 Frame = +3

Query: 3    CNNCGGQGHSFQNCPIGTSRPAQSVGGGYSS-------------AGANVCFKCHQPGHWA 143
            CN+CGG GHS  NCP   S  +Q+ GGG+ +              G   C+KCHQ GHWA
Sbjct: 815  CNSCGGTGHSASNCPSMMSGQSQAYGGGFGNRATSGMSSGGGGGGGGGECYKCHQYGHWA 874

Query: 144  SECPGVGAVTSAYR-GSGTSGRFTRQNIGGF 233
             +CPGV    +A    SG  G   RQ++GGF
Sbjct: 875  RDCPGVSNAPAANNMTSGRYGNTPRQHVGGF 905


>ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
           partial [Cucumis sativus]
          Length = 425

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/76 (51%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
 Frame = +3

Query: 3   CNNCGGQGHSFQNCPIGTSRPAQSVGGGYSSAGAN--------VCFKCHQPGHWASECPG 158
           CN+CGG GHS  NCP   S PA SVGGG  S  A+         CFKCHQ GHWA +CPG
Sbjct: 350 CNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGTSGECFKCHQTGHWARDCPG 409

Query: 159 VGAVTSAYRGSGTSGR 206
           +  V  AY   G + R
Sbjct: 410 LANVPPAYGNRGFTAR 425


>ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Cucumis sativus]
          Length = 861

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/76 (51%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
 Frame = +3

Query: 3    CNNCGGQGHSFQNCPIGTSRPAQSVGGGYSSAGAN--------VCFKCHQPGHWASECPG 158
            CN+CGG GHS  NCP   S PA SVGGG  S  A+         CFKCHQ GHWA +CPG
Sbjct: 786  CNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGTSGECFKCHQTGHWARDCPG 845

Query: 159  VGAVTSAYRGSGTSGR 206
            +  V  AY   G + R
Sbjct: 846  LANVPPAYGNRGFTAR 861


>ref|XP_006432556.1| hypothetical protein CICLE_v10000254mg [Citrus clementina]
            gi|568834454|ref|XP_006471343.1| PREDICTED: replication
            protein A 70 kDa DNA-binding subunit C-like [Citrus
            sinensis] gi|557534678|gb|ESR45796.1| hypothetical
            protein CICLE_v10000254mg [Citrus clementina]
          Length = 858

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 40/91 (43%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
 Frame = +3

Query: 3    CNNCGGQGHSFQNCPIGTSRPAQSVGGGYS---SAGANV-----CFKCHQPGHWASECPG 158
            C++CG  GHS  NCP   S P QS GGGY+   S+GA +     C+KCH+ GHWA +CP 
Sbjct: 768  CSSCGAVGHSSMNCPSIMSGPGQSSGGGYANSFSSGAGIAASSECYKCHKTGHWARDCPS 827

Query: 159  VGAVTSAYRGSGTS------GRFTRQNIGGF 233
            + A   AY  SG            RQ +GGF
Sbjct: 828  LNAAPPAYGSSGIGISAAGYRGAPRQQVGGF 858


>emb|CBI37456.3| unnamed protein product [Vitis vinifera]
          Length = 754

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 37/75 (49%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
 Frame = +3

Query: 3   CNNCGGQGHSFQNCPIGTSRPAQSVGGGY-------SSAGANV--CFKCHQPGHWASECP 155
           CN+CGG GHS  NCP     P QS GGGY        SAG     C+KCHQ GHWA +CP
Sbjct: 614 CNSCGGTGHSSSNCPSVMHSPRQSSGGGYVSRASTGPSAGGTTGECYKCHQFGHWARDCP 673

Query: 156 GVGAVTSAYRGSGTS 200
           G+     AY  SG +
Sbjct: 674 GLNTGPPAYGSSGVN 688


>gb|EOY25325.1| Replication factor A 1, rfa1, putative [Theobroma cacao]
          Length = 911

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 40/87 (45%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
 Frame = +3

Query: 3    CNNCGGQGHSFQNCPIGTSRPAQSVGG---GYSSAGANV------CFKCHQPGHWASECP 155
            CN+CG  GHS  NCP   + PAQS+G    G  S+ A+V      C+KCHQ GHWA +CP
Sbjct: 825  CNSCGVTGHSSTNCPTFMNGPAQSMGRDCTGRISSEASVGRTSDECYKCHQSGHWAKDCP 884

Query: 156  GVG-AVTSAYRGSGTSGRFTRQNIGGF 233
              G +  S    SG  G  +RQ +GGF
Sbjct: 885  RSGPSYGSTDFSSGRYGGVSRQQVGGF 911


>ref|XP_002519884.1| replication factor A 1, rfa1, putative [Ricinus communis]
            gi|223540930|gb|EEF42488.1| replication factor A 1, rfa1,
            putative [Ricinus communis]
          Length = 901

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 36/79 (45%), Positives = 45/79 (56%), Gaps = 10/79 (12%)
 Frame = +3

Query: 3    CNNCGGQGHSFQNCPIGTSRPAQSVGGGYS--------SAGAN-VCFKCHQPGHWASECP 155
            C +CG   HS  NCP   + P QS GG Y+        SAGA   C+KCHQ GHWA +CP
Sbjct: 801  CISCGATSHSSANCPSTINAPRQSAGGFYANQPSSLAGSAGAGGECYKCHQVGHWARDCP 860

Query: 156  GVGAVTSAYRGSG-TSGRF 209
            G+  +  AY  +  +SGRF
Sbjct: 861  GLNNIPPAYGSTAISSGRF 879


>gb|AFR97615.2| DNA topoisomerase III [Cryptococcus neoformans var. grubii H99]
          Length = 1021

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 34/67 (50%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = +3

Query: 3    CNNCGGQGHSFQNCPIGTSRPAQSVGGGYSSAGANV-CFKCHQPGHWASECPGVGAVTSA 179
            C  CG QGH   NCP  T      VG G S  G +  CFKC+QPGHWAS CP      S+
Sbjct: 943  CYKCGEQGHWATNCPNNTCGGGVGVGAGGSGGGTSGDCFKCNQPGHWASNCPNDEGGGSS 1002

Query: 180  YRGSGTS 200
            YRGS +S
Sbjct: 1003 YRGSSSS 1009


>ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like
            [Glycine max]
          Length = 894

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
 Frame = +3

Query: 3    CNNCGGQGHSFQNCPIGTSRPAQSVGGGYSSAGANVCFKCHQPGHWASECPGVGAVTSAY 182
            C  C   GH  ++CP  ++ P  S G      G+  CFKCHQ GHWA +CPG+ A  S+Y
Sbjct: 814  CYKCHQSGHYARDCPGFSAAPPSSYGSNSGGGGSGECFKCHQTGHWARDCPGLSAAPSSY 873

Query: 183  RGS----GTSGRFTRQNIGGF 233
              +    G  G   +Q  GG+
Sbjct: 874  GSANAMQGRYGVAQKQQFGGY 894



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
 Frame = +3

Query: 3   CNNCGGQGHSFQNCPIGTSRPAQSVGGGYSS---------AGANV-CFKCHQPGHWASEC 152
           C NCG  GHS   CP   + P  S GGG+++          GA+V C+KCHQ GH+A +C
Sbjct: 768 CTNCGVSGHSSALCPNIRNVPGHSAGGGFANRASAGLGGGGGASVECYKCHQSGHYARDC 827

Query: 153 PGVGAVTSAYRGSGTSG 203
           PG  A   +  GS + G
Sbjct: 828 PGFSAAPPSSYGSNSGG 844


>gb|EPS68676.1| hypothetical protein M569_06091 [Genlisea aurea]
          Length = 832

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 37/86 (43%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
 Frame = +3

Query: 3   CNNCGGQGHSFQNCPIGTSRPAQSVGGGYSS----AGANV-----CFKCHQPGHWASECP 155
           C++CGG GH+  NCP  +S   QS G G        G NV     CFKCHQ GHWA +CP
Sbjct: 750 CSSCGGTGHNNSNCP--SSATVQSYGSGNGGMAPVGGGNVGSGGECFKCHQFGHWARDCP 807

Query: 156 GVGAVTSAYRGSGTSGRFTRQNIGGF 233
             G     Y  S   G   +Q++GGF
Sbjct: 808 NAGN-APPYASSSRYGVAPKQHVGGF 832


>ref|XP_004512401.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cicer arietinum]
          Length = 917

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
 Frame = +3

Query: 3   CNNCGGQGHSFQNCPIGTSRPAQSVGGGY-------SSAGANVCFKCHQPGHWASECPGV 161
           C+NCG  GHS   C    ++  QS G  Y       S A +  C+KCHQPGHWA +CPG+
Sbjct: 788 CSNCGASGHSSAQCLNLRNQSGQSTGAAYGNRVSAGSGAASGDCYKCHQPGHWARDCPGM 847

Query: 162 GA 167
           GA
Sbjct: 848 GA 849



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 11/88 (12%)
 Frame = +3

Query: 3    CNNCGGQGHSFQNCP-----IGTSRPAQSVGGGYSSAGANVCFKCHQPGHWASECPGVGA 167
            C  C   GH  ++CP       + +P Q    G S A +  C+KCHQ GHWA +CPG+ A
Sbjct: 831  CYKCHQPGHWARDCPGMGAAAHSDQPMQRPSAG-SGAASGECYKCHQTGHWARDCPGISA 889

Query: 168  VTSAYRGSGT-SGRF-----TRQNIGGF 233
               +Y G+    GR+       Q  GG+
Sbjct: 890  APPSYGGNNVMQGRYGNGIAQNQQYGGY 917


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355513943|gb|AES95566.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 1723

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/70 (42%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
 Frame = +3

Query: 3   CNNCGGQGHSFQNCPIGTSRPAQSVGGGY------SSAGANVCFKCHQPGHWASECPGVG 164
           C+NCGG  HS   C    + P Q+ GG Y      S   +  C+KC QPGHWAS CP + 
Sbjct: 785 CSNCGGSDHSSAQCLHLRNPPEQTAGGAYVNTVSGSGGASGKCYKCQQPGHWASNCPSMS 844

Query: 165 AVTSAYRGSG 194
           A      GSG
Sbjct: 845 AANRVSGGSG 854



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +3

Query: 3    CNNCGGQGHSFQNCPIGTSRPAQSVGGGYSSAGANVCFKCHQPGHWASECPGVGAVTSAY 182
            C  C   GH   NCP  +   A  V GG   A  N C+KC+QPGHWA+ CP + A   ++
Sbjct: 827  CYKCQQPGHWASNCP--SMSAANRVSGGSGGASGN-CYKCNQPGHWANNCPNMSAAPQSH 883

Query: 183  RGSGT-SGRF 209
              S T  GR+
Sbjct: 884  GNSNTGQGRY 893


>ref|XP_004960524.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Setaria italica]
          Length = 1002

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
 Frame = +3

Query: 3    CNNCGGQGHSFQNCPIGTSR---PAQSVGGGYSS----AGANVCFKCHQPGHWASECPGV 161
            C  CG  GH+ Q+CP    R   PA +    Y S    AG+  CF+C+QPGH+A+ CPGV
Sbjct: 925  CMGCGSSGHNAQSCPASMYRQQQPAANTASSYVSSPGDAGSGRCFRCNQPGHFANACPGV 984

Query: 162  GAVTSAY 182
            GA +  Y
Sbjct: 985  GAASGGY 991


>ref|XP_004301636.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Fragaria vesca subsp. vesca]
          Length = 874

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/79 (44%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
 Frame = +3

Query: 3    CNNCGGQGHSFQNCPIGTSRPAQSVGGGYSSA-----GANVCFKCHQPGHWASECPGVGA 167
            CN CGG  H+  NCP   +   QS GG Y+++      +  C+KCHQPGHWAS+CP V  
Sbjct: 795  CNICGGTSHNSLNCP---NVMKQSSGGSYANSRPVASNSGECYKCHQPGHWASDCP-VSN 850

Query: 168  VTSAYRGSGTS-GRFTRQN 221
               AY  SG   GR+   N
Sbjct: 851  HIPAYGSSGVQPGRYGVSN 869