BLASTX nr result

ID: Zingiber24_contig00029225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00029225
         (259 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS47041.1| hypothetical protein TRIUR3_04150 [Triticum urartu]     55   8e-06

>gb|EMS47041.1| hypothetical protein TRIUR3_04150 [Triticum urartu]
          Length = 522

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
 Frame = +2

Query: 20  SKLRDKASPLITVLSSF-PSAEMLQAMRILFANKTNGSNFMDITFDASKRSMEIPQLLIN 196
           S+ R ++  L++ L  + P A+ L+   + F  + N ++FMD+ F  ++  +EIPQL +N
Sbjct: 324 SRRRRRSDELLSELPQWIPCAKELEESGVRFRKRKNATSFMDVRF--ARGVLEIPQLELN 381

Query: 197 DDNISLLRNLIAFEQQFHGVP 259
           D + SL RNLIAFEQ +   P
Sbjct: 382 DSSESLFRNLIAFEQTYPDTP 402


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