BLASTX nr result

ID: Zingiber24_contig00029169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00029169
         (324 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK54297.1|AC034258_15 putative helicase [Oryza sativa Japoni...    67   2e-09
gb|EEE51080.1| hypothetical protein OsJ_31779 [Oryza sativa Japo...    67   2e-09
gb|EEC67097.1| hypothetical protein OsI_33891 [Oryza sativa Indi...    67   2e-09
ref|NP_001064765.1| Os10g0457700 [Oryza sativa Japonica Group] g...    67   2e-09
gb|ABB47753.2| SNF2 domain-containing protein, putative, express...    67   2e-09
ref|XP_006661831.1| PREDICTED: transcriptional regulator ATRX-li...    61   1e-07
ref|XP_006854411.1| hypothetical protein AMTR_s00039p00200130 [A...    60   4e-07
ref|XP_004982960.1| PREDICTED: transcriptional regulator ATRX-li...    56   4e-06
ref|XP_004982959.1| PREDICTED: transcriptional regulator ATRX-li...    56   4e-06
ref|NP_001132124.1| chromatin complex subunit A [Zea mays] gi|19...    55   8e-06

>gb|AAK54297.1|AC034258_15 putative helicase [Oryza sativa Japonica Group]
          Length = 1492

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/76 (55%), Positives = 48/76 (63%)
 Frame = -3

Query: 232 SDEDDENVSFEMLLDGSDNEITSASDNDCEPKSEAPLTDXXXXXXXXXXXXXESKAAEAQ 53
           +D+D EN S+E LL  SDNE TS SD   E  +EAPLTD             ESKAA+AQ
Sbjct: 74  TDDDSENDSYEYLLRESDNEQTSESDAG-EGDNEAPLTDEEVETLITEFLDAESKAAQAQ 132

Query: 52  ESLEHESLANVESEVR 5
           ESLE ESL  +ESEVR
Sbjct: 133 ESLEKESLEKIESEVR 148


>gb|EEE51080.1| hypothetical protein OsJ_31779 [Oryza sativa Japonica Group]
          Length = 1417

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/76 (55%), Positives = 48/76 (63%)
 Frame = -3

Query: 232 SDEDDENVSFEMLLDGSDNEITSASDNDCEPKSEAPLTDXXXXXXXXXXXXXESKAAEAQ 53
           +D+D EN S+E LL  SDNE TS SD   E  +EAPLTD             ESKAA+AQ
Sbjct: 74  TDDDSENDSYEYLLRESDNEQTSESDAG-EGDNEAPLTDEEVETLITEFLDAESKAAQAQ 132

Query: 52  ESLEHESLANVESEVR 5
           ESLE ESL  +ESEVR
Sbjct: 133 ESLEKESLEKIESEVR 148


>gb|EEC67097.1| hypothetical protein OsI_33891 [Oryza sativa Indica Group]
          Length = 1143

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/76 (55%), Positives = 48/76 (63%)
 Frame = -3

Query: 232 SDEDDENVSFEMLLDGSDNEITSASDNDCEPKSEAPLTDXXXXXXXXXXXXXESKAAEAQ 53
           +D+D EN S+E LL  SDNE TS SD   E  +EAPLTD             ESKAA+AQ
Sbjct: 12  TDDDSENDSYEYLLRESDNEQTSESDAG-EGDNEAPLTDEEVETLITEFLDAESKAAQAQ 70

Query: 52  ESLEHESLANVESEVR 5
           ESLE ESL  +ESEVR
Sbjct: 71  ESLEKESLEKIESEVR 86


>ref|NP_001064765.1| Os10g0457700 [Oryza sativa Japonica Group]
           gi|113639374|dbj|BAF26679.1| Os10g0457700, partial
           [Oryza sativa Japonica Group]
          Length = 1319

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/76 (55%), Positives = 48/76 (63%)
 Frame = -3

Query: 232 SDEDDENVSFEMLLDGSDNEITSASDNDCEPKSEAPLTDXXXXXXXXXXXXXESKAAEAQ 53
           +D+D EN S+E LL  SDNE TS SD   E  +EAPLTD             ESKAA+AQ
Sbjct: 74  TDDDSENDSYEYLLRESDNEQTSESDAG-EGDNEAPLTDEEVETLITEFLDAESKAAQAQ 132

Query: 52  ESLEHESLANVESEVR 5
           ESLE ESL  +ESEVR
Sbjct: 133 ESLEKESLEKIESEVR 148


>gb|ABB47753.2| SNF2 domain-containing protein, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 1476

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/76 (55%), Positives = 48/76 (63%)
 Frame = -3

Query: 232 SDEDDENVSFEMLLDGSDNEITSASDNDCEPKSEAPLTDXXXXXXXXXXXXXESKAAEAQ 53
           +D+D EN S+E LL  SDNE TS SD   E  +EAPLTD             ESKAA+AQ
Sbjct: 74  TDDDSENDSYEYLLRESDNEQTSESDAG-EGDNEAPLTDEEVETLITEFLDAESKAAQAQ 132

Query: 52  ESLEHESLANVESEVR 5
           ESLE ESL  +ESEVR
Sbjct: 133 ESLEKESLEKIESEVR 148


>ref|XP_006661831.1| PREDICTED: transcriptional regulator ATRX-like [Oryza brachyantha]
          Length = 1480

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/76 (50%), Positives = 48/76 (63%)
 Frame = -3

Query: 232 SDEDDENVSFEMLLDGSDNEITSASDNDCEPKSEAPLTDXXXXXXXXXXXXXESKAAEAQ 53
           +D+D E+ S+E LL  SDNE +S SD   E  +EAPLT+             ESKAA+AQ
Sbjct: 74  ADDDSESNSYEYLLQESDNEQSSESDAG-EGDNEAPLTEEEVEALVTEFLDVESKAAQAQ 132

Query: 52  ESLEHESLANVESEVR 5
           ESLE ESL  +E+EVR
Sbjct: 133 ESLEKESLDKIEAEVR 148


>ref|XP_006854411.1| hypothetical protein AMTR_s00039p00200130 [Amborella trichopoda]
           gi|548858087|gb|ERN15878.1| hypothetical protein
           AMTR_s00039p00200130 [Amborella trichopoda]
          Length = 1585

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
 Frame = -3

Query: 298 DDTSIESKVHIEPEADVIAEDYSDEDDEN-----------VSFEMLLDGSDNEITSASDN 152
           DD++I+ +     +++++ E+   ED EN           +  +  ++ SD++    S+N
Sbjct: 105 DDSTIDKEQKDVEDSEIVNEEEELEDLENGKEHEELEDSEIGTDSFVEDSDDDEPFISEN 164

Query: 151 DCEPKSEAPLTDXXXXXXXXXXXXXESKAAEAQESLEHESLANVESEVR 5
           + +   EAPLTD             ESKAAEAQESLE ESLA VE+EVR
Sbjct: 165 ESDLDVEAPLTDAEIEELINEFLEVESKAAEAQESLEKESLAQVENEVR 213


>ref|XP_004982960.1| PREDICTED: transcriptional regulator ATRX-like isoform X2 [Setaria
           italica]
          Length = 1453

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/97 (40%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
 Frame = -3

Query: 277 KVHIEPEADVIAEDYS------DEDDENVSFEMLLDGSDNEITSASDNDCEPKSEAPLTD 116
           K H EP    +  D +      D+D E  SFE  +  SDNE    S+ D    +E PLT+
Sbjct: 39  KEHKEPVCKTMDNDVNEETSITDDDSEADSFEFFVHESDNEQALGSEKD----TEVPLTE 94

Query: 115 XXXXXXXXXXXXXESKAAEAQESLEHESLANVESEVR 5
                        ESKAA+AQESLE ESL  +E+EVR
Sbjct: 95  EEVEELVCEFLEVESKAAQAQESLEKESLDKIETEVR 131


>ref|XP_004982959.1| PREDICTED: transcriptional regulator ATRX-like isoform X1 [Setaria
           italica]
          Length = 1471

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/97 (40%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
 Frame = -3

Query: 277 KVHIEPEADVIAEDYS------DEDDENVSFEMLLDGSDNEITSASDNDCEPKSEAPLTD 116
           K H EP    +  D +      D+D E  SFE  +  SDNE    S+ D    +E PLT+
Sbjct: 57  KEHKEPVCKTMDNDVNEETSITDDDSEADSFEFFVHESDNEQALGSEKD----TEVPLTE 112

Query: 115 XXXXXXXXXXXXXESKAAEAQESLEHESLANVESEVR 5
                        ESKAA+AQESLE ESL  +E+EVR
Sbjct: 113 EEVEELVCEFLEVESKAAQAQESLEKESLDKIETEVR 149


>ref|NP_001132124.1| chromatin complex subunit A [Zea mays] gi|194693490|gb|ACF80829.1|
           unknown [Zea mays]
          Length = 338

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 42/106 (39%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
 Frame = -3

Query: 295 DTSIES---KVHIEPEADVIAEDYS------DEDDENVSFEMLLDGSDNEITSASDNDCE 143
           +TSI     K H EP    +  + +      D+D E  S+E  +  SDNE  SAS    E
Sbjct: 45  ETSIRESSLKEHKEPPRTTVDNNVNEETSTTDDDSEANSYEFFVRESDNEQASAS----E 100

Query: 142 PKSEAPLTDXXXXXXXXXXXXXESKAAEAQESLEHESLANVESEVR 5
             +E PLT+             ESKAA+AQESLE ESL  +E+EVR
Sbjct: 101 EGTEVPLTEEEVEELVVEFLEVESKAAQAQESLEKESLDKIETEVR 146


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