BLASTX nr result

ID: Zingiber24_contig00029163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00029163
         (202 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006659294.1| PREDICTED: heterogeneous nuclear ribonucleop...    67   3e-09
ref|NP_001061525.1| Os08g0320100 [Oryza sativa Japonica Group] g...    67   3e-09
gb|EEE57298.1| hypothetical protein OsJ_07373 [Oryza sativa Japo...    67   3e-09
ref|XP_003573706.1| PREDICTED: RNA-binding protein Musashi homol...    64   3e-08
gb|ADN95983.1| G-strand specific single-stranded telomere-bindin...    62   6e-08
gb|ADN95985.1| G-strand specific single-stranded telomere-bindin...    62   8e-08
gb|ADN95984.1| G-strand specific single-stranded telomere-bindin...    62   8e-08
tpg|DAA46949.1| TPA: hypothetical protein ZEAMMB73_935024 [Zea m...    62   1e-07
ref|XP_002455956.1| hypothetical protein SORBIDRAFT_03g027920 [S...    62   1e-07
gb|EOX93553.1| RNA-binding family protein isoform 1 [Theobroma c...    61   1e-07
gb|EMJ16810.1| hypothetical protein PRUPE_ppa007812mg [Prunus pe...    61   2e-07
gb|EXB34469.1| Heterogeneous nuclear ribonucleoprotein 27C [Moru...    60   2e-07
gb|ESW18006.1| hypothetical protein PHAVU_006G005300g [Phaseolus...    60   2e-07
ref|XP_006357669.1| PREDICTED: heterogeneous nuclear ribonucleop...    60   3e-07
gb|EPS72088.1| g-strand specific single-stranded telomere-bindin...    60   3e-07
ref|XP_004502113.1| PREDICTED: glycine-rich RNA-binding protein ...    60   3e-07
ref|XP_004502112.1| PREDICTED: glycine-rich RNA-binding protein ...    60   3e-07
ref|XP_004243590.1| PREDICTED: DAZ-associated protein 1-like [So...    60   3e-07
ref|XP_003542187.1| PREDICTED: heterogeneous nuclear ribonucleop...    60   3e-07
ref|XP_003601524.1| RNA-binding protein [Medicago truncatula] gi...    60   3e-07

>ref|XP_006659294.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Oryza
           brachyantha]
          Length = 350

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 29/41 (70%), Positives = 36/41 (87%)
 Frame = +3

Query: 78  GSRMQEHDGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           G +M+EHDGASPAKIFIGGLPKDT++  F ++F +YGEIVD
Sbjct: 3   GGKMKEHDGASPAKIFIGGLPKDTTMGTFKEYFGKYGEIVD 43


>ref|NP_001061525.1| Os08g0320100 [Oryza sativa Japonica Group]
           gi|35215091|dbj|BAC92448.1| RNA recognition motif
           (RRM)-containing protein-like [Oryza sativa Japonica
           Group] gi|42409159|dbj|BAD10426.1| RNA recognition motif
           (RRM)-containing protein-like [Oryza sativa Japonica
           Group] gi|113623494|dbj|BAF23439.1| Os08g0320100 [Oryza
           sativa Japonica Group] gi|215768436|dbj|BAH00665.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|218200931|gb|EEC83358.1| hypothetical protein
           OsI_28764 [Oryza sativa Indica Group]
           gi|258644640|dbj|BAI39889.1| ribonucleoprotein-like
           [Oryza sativa Indica Group]
          Length = 350

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 29/41 (70%), Positives = 36/41 (87%)
 Frame = +3

Query: 78  GSRMQEHDGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           G +M+EHDGASPAKIFIGGLPKDT++  F ++F +YGEIVD
Sbjct: 3   GGKMKEHDGASPAKIFIGGLPKDTTMGTFKEYFGKYGEIVD 43


>gb|EEE57298.1| hypothetical protein OsJ_07373 [Oryza sativa Japonica Group]
          Length = 459

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 29/41 (70%), Positives = 36/41 (87%)
 Frame = +3

Query: 78  GSRMQEHDGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           G +M+EHDGASPAKIFIGGLPKDT++  F ++F +YGEIVD
Sbjct: 3   GGKMKEHDGASPAKIFIGGLPKDTTMGTFKEYFGKYGEIVD 43


>ref|XP_003573706.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Brachypodium
           distachyon]
          Length = 347

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 28/42 (66%), Positives = 36/42 (85%)
 Frame = +3

Query: 75  MGSRMQEHDGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           M ++M+EHDGASPAKIFIGGL K+TSL  F ++F +YGEI+D
Sbjct: 1   MAAKMKEHDGASPAKIFIGGLSKETSLGTFKEYFGKYGEIID 42


>gb|ADN95983.1| G-strand specific single-stranded telomere-binding protein 1
           [Nicotiana tabacum]
          Length = 346

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 30/43 (69%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
 Frame = +3

Query: 75  MGSRMQEH-DGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           MGSR  +  DGASP KIFIGGL K+T+LE FVK+FE+YGEI+D
Sbjct: 1   MGSRKNDFGDGASPGKIFIGGLAKETTLEQFVKYFEKYGEIID 43


>gb|ADN95985.1| G-strand specific single-stranded telomere-binding protein 3
           [Nicotiana tabacum]
          Length = 339

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/43 (69%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
 Frame = +3

Query: 75  MGSRMQEH-DGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           MGSR  +  DGASP KIFIGGL K+T+LE FVK+FE+YGEI+D
Sbjct: 1   MGSRKTDFGDGASPGKIFIGGLAKETTLEQFVKYFEKYGEIID 43


>gb|ADN95984.1| G-strand specific single-stranded telomere-binding protein 2
           [Nicotiana tabacum]
          Length = 337

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/43 (69%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
 Frame = +3

Query: 75  MGSRMQEH-DGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           MGSR  +  DGASP KIFIGGL K+T+LE FVK+FE+YGEI+D
Sbjct: 1   MGSRKTDFGDGASPGKIFIGGLAKETTLEQFVKYFEKYGEIID 43


>tpg|DAA46949.1| TPA: hypothetical protein ZEAMMB73_935024 [Zea mays]
          Length = 348

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 27/42 (64%), Positives = 34/42 (80%)
 Frame = +3

Query: 75  MGSRMQEHDGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           M  +M+E DGASPAKIFIGGL KDTS+  F +HF +YG+I+D
Sbjct: 1   MAGKMKELDGASPAKIFIGGLSKDTSMSTFKEHFGKYGDIID 42


>ref|XP_002455956.1| hypothetical protein SORBIDRAFT_03g027920 [Sorghum bicolor]
           gi|241927931|gb|EES01076.1| hypothetical protein
           SORBIDRAFT_03g027920 [Sorghum bicolor]
          Length = 349

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 27/42 (64%), Positives = 34/42 (80%)
 Frame = +3

Query: 75  MGSRMQEHDGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           M  +M+E DGASPAKIFIGGL KDTS+  F +HF +YG+I+D
Sbjct: 1   MAGKMKELDGASPAKIFIGGLSKDTSMSTFKEHFGKYGDIID 42


>gb|EOX93553.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508701658|gb|EOX93554.1| RNA-binding family protein
           isoform 1 [Theobroma cacao] gi|508701659|gb|EOX93555.1|
           RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508701660|gb|EOX93556.1| RNA-binding family protein
           isoform 1 [Theobroma cacao]
          Length = 344

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 29/43 (67%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
 Frame = +3

Query: 75  MGSRM-QEHDGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           MGSR   ++DGASP KIFIGGL KDT+L+ F K+FE+YGEI D
Sbjct: 1   MGSRKGSDNDGASPGKIFIGGLAKDTTLDTFTKYFEKYGEITD 43


>gb|EMJ16810.1| hypothetical protein PRUPE_ppa007812mg [Prunus persica]
          Length = 355

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 5/47 (10%)
 Frame = +3

Query: 75  MGSRMQEH-----DGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           M S+   H     DGASP KIFIGGL KDT+L+ FVK+FE+YGEI+D
Sbjct: 1   MASKKSNHNPHSGDGASPGKIFIGGLAKDTTLDTFVKYFEKYGEIID 47


>gb|EXB34469.1| Heterogeneous nuclear ribonucleoprotein 27C [Morus notabilis]
          Length = 353

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 5/47 (10%)
 Frame = +3

Query: 75  MGSRMQEH-----DGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           M S+  +H     DGASP KIFIGGL KDT+L+ FVK+FE+YGEI D
Sbjct: 1   MASKKTDHNPLSGDGASPGKIFIGGLAKDTTLDTFVKYFEEYGEITD 47


>gb|ESW18006.1| hypothetical protein PHAVU_006G005300g [Phaseolus vulgaris]
          Length = 353

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/46 (65%), Positives = 35/46 (76%), Gaps = 4/46 (8%)
 Frame = +3

Query: 75  MGSRMQEH----DGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           M SR  ++    DGASP KIFIGGL KDT+LE FVK+FE+YGEI D
Sbjct: 1   MASRKSDNPHSGDGASPGKIFIGGLAKDTTLETFVKYFEKYGEITD 46


>ref|XP_006357669.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Solanum
           tuberosum]
          Length = 342

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/43 (67%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
 Frame = +3

Query: 75  MGSRMQEH-DGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           MGSR  +  DGASP KIFIGGL K+T+ E FVK+FE+YGEI+D
Sbjct: 1   MGSRKNDFGDGASPGKIFIGGLAKETTREQFVKYFEKYGEIID 43


>gb|EPS72088.1| g-strand specific single-stranded telomere-binding protein 1
           [Genlisea aurea]
          Length = 350

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/43 (69%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
 Frame = +3

Query: 75  MGSRMQEH-DGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           MGSR  +  DGASP KIFIGGL KDTSL+ FVK+F +YGEI D
Sbjct: 1   MGSRRPDFGDGASPGKIFIGGLAKDTSLDTFVKYFGKYGEITD 43


>ref|XP_004502113.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
           isoform X2 [Cicer arietinum]
          Length = 350

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = +3

Query: 99  DGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           DGASP KIFIGGL KDT+LE FVK+FE+YGEI D
Sbjct: 13  DGASPGKIFIGGLAKDTTLETFVKYFERYGEITD 46


>ref|XP_004502112.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
           isoform X1 [Cicer arietinum]
          Length = 368

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = +3

Query: 99  DGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           DGASP KIFIGGL KDT+LE FVK+FE+YGEI D
Sbjct: 13  DGASPGKIFIGGLAKDTTLETFVKYFERYGEITD 46


>ref|XP_004243590.1| PREDICTED: DAZ-associated protein 1-like [Solanum lycopersicum]
          Length = 343

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/43 (65%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
 Frame = +3

Query: 75  MGSRMQEH-DGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           MGSR  ++ DGASP KIFIGG+ K+T+ E FVK+FE+YGEI+D
Sbjct: 1   MGSRKNDYGDGASPGKIFIGGVAKETTREQFVKYFEKYGEIID 43


>ref|XP_003542187.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Glycine
           max]
          Length = 352

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = +3

Query: 99  DGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           DGASP KIFIGGL KDT+LE FVK+FE+YGEI D
Sbjct: 13  DGASPGKIFIGGLAKDTTLETFVKYFEKYGEITD 46


>ref|XP_003601524.1| RNA-binding protein [Medicago truncatula]
           gi|355490572|gb|AES71775.1| RNA-binding protein
           [Medicago truncatula]
          Length = 370

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/46 (65%), Positives = 35/46 (76%), Gaps = 4/46 (8%)
 Frame = +3

Query: 75  MGSRMQEH----DGASPAKIFIGGLPKDTSLEAFVKHFEQYGEIVD 200
           M SR  ++    DGASP KIFIGGL KDT+LE FVK+FE+YGEI D
Sbjct: 1   MASRKSDNPHSGDGASPGKIFIGGLAKDTTLEEFVKYFERYGEITD 46


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