BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00029152
         (503 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003572036.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    96   4e-18
ref|XP_004983769.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    92   9e-17
gb|EMS45200.1| Zinc finger protein GIS2 [Triticum urartu]              89   5e-16
gb|EMT00220.1| hypothetical protein F775_08671 [Aegilops tauschii]     89   8e-16
gb|AFW88258.1| hypothetical protein ZEAMMB73_888595 [Zea mays]         89   8e-16
ref|NP_001152554.1| LOC100286194 [Zea mays] gi|195657439|gb|ACG4...    89   8e-16
gb|EMT15673.1| RING finger and WD repeat domain-containing prote...    86   5e-15
gb|AFW88253.1| transposon protein [Zea mays]                           86   5e-15
gb|AFW88252.1| hypothetical protein ZEAMMB73_002791 [Zea mays]         86   5e-15
gb|AFW88256.1| hypothetical protein ZEAMMB73_888595 [Zea mays]         83   3e-14
gb|ACF87686.1| unknown [Zea mays]                                      83   3e-14
ref|XP_002464996.1| hypothetical protein SORBIDRAFT_01g030130 [S...    80   3e-13
gb|EEE51342.1| hypothetical protein OsJ_32345 [Oryza sativa Japo...    79   6e-13
gb|ACR35629.1| unknown [Zea mays] gi|414864294|tpg|DAA42851.1| T...    76   5e-12
ref|NP_001132877.1| uncharacterized LOC100194370 [Zea mays] gi|1...    76   5e-12
ref|XP_003562212.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    74   3e-11
ref|XP_002468674.1| hypothetical protein SORBIDRAFT_01g050080 [S...    72   6e-11
gb|EAY79407.1| hypothetical protein OsI_34535 [Oryza sativa Indi...    72   6e-11
ref|XP_004986047.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    71   1e-10
ref|XP_002316395.1| hypothetical protein POPTR_0010s23470g [Popu...    70   3e-10

>ref|XP_003572036.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Brachypodium
           distachyon]
          Length = 560

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 46/99 (46%), Positives = 62/99 (62%)
 Frame = +3

Query: 207 CCFTLQNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLSQHASKIELPPNT 386
           C F LQNE  L  ARVMGID SS I++ SG++ G+  EHV+ KIS+ S+   K+ LPPNT
Sbjct: 215 CKFVLQNEYFLDGARVMGIDASSQIILASGRAAGVSAEHVITKISMFSRQEMKVHLPPNT 274

Query: 387 SAIKDLRILPNXXXXXXXXXXXXXXYSMASNNLALKYDL 503
            A++D+ ILP               +SM +NN+ L+YDL
Sbjct: 275 KAVRDICILPGGLAVFASLGRKLLLFSMTTNNIVLQYDL 313


>ref|XP_004983769.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Setaria italica]
          Length = 575

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
 Frame = +3

Query: 207 CCFTLQNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLS-QHASKIELPPN 383
           C F LQNE  +  ARVMGID SS I+  SG+ PG+  EH+L KI++ + Q   KI LPP+
Sbjct: 230 CSFVLQNEFLVEGARVMGIDASSQIIFTSGRGPGVGAEHILTKINMFARQRMQKIHLPPD 289

Query: 384 TSAIKDLRILPNXXXXXXXXXXXXXXYSMASNNLALKYDL 503
           T AI+D+ ILP               +S+A+NN+ L+YDL
Sbjct: 290 TKAIRDICILPGGCAVFASLGRKLSLFSVATNNVVLQYDL 329


>gb|EMS45200.1| Zinc finger protein GIS2 [Triticum urartu]
          Length = 771

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 43/94 (45%), Positives = 57/94 (60%)
 Frame = +3

Query: 222 QNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLSQHASKIELPPNTSAIKD 401
           QNE  L  ARVMGID SS I++ SG++PG+  EHVL KI + S+  +K+ LPPNT A++D
Sbjct: 112 QNEFVLDGARVMGIDASSQIIVASGRAPGVSAEHVLTKICMFSRQETKVRLPPNTKAVRD 171

Query: 402 LRILPNXXXXXXXXXXXXXXYSMASNNLALKYDL 503
           + I P                SM +NN+ L YDL
Sbjct: 172 ICITPGGLAIFASLGRKLSLLSMTTNNVVLHYDL 205


>gb|EMT00220.1| hypothetical protein F775_08671 [Aegilops tauschii]
          Length = 480

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 43/94 (45%), Positives = 58/94 (61%)
 Frame = +3

Query: 222 QNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLSQHASKIELPPNTSAIKD 401
           QNE  L  ARVMGID SS I++ SG++PG+  EHVL KI + S+  +K+ LPPNT A++D
Sbjct: 106 QNEFVLDGARVMGIDASSQIIVASGRAPGVSAEHVLTKICMFSRQETKVCLPPNTKAVRD 165

Query: 402 LRILPNXXXXXXXXXXXXXXYSMASNNLALKYDL 503
           + I P                SM +NN+ L+YDL
Sbjct: 166 ICITPGGLAIFASLGRKLSLLSMTTNNVVLQYDL 199


>gb|AFW88258.1| hypothetical protein ZEAMMB73_888595 [Zea mays]
          Length = 298

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 44/98 (44%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
 Frame = +3

Query: 213 FTLQNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLSQHA-SKIELPPNTS 389
           F LQNE  +  ARVMGID SS I++ SG++ G+  EH+L K+S+   H   KI LPP+T 
Sbjct: 166 FALQNEFLVDGARVMGIDASSQIILTSGRAHGVSAEHILTKVSMFHGHGMEKIHLPPDTK 225

Query: 390 AIKDLRILPNXXXXXXXXXXXXXXYSMASNNLALKYDL 503
           AI+D+ +LP               +SMA+NN+ L+YDL
Sbjct: 226 AIRDICVLPGGHVVFASLGRKLSIFSMATNNVVLQYDL 263


>ref|NP_001152554.1| LOC100286194 [Zea mays] gi|195657439|gb|ACG48187.1| transposon
           protein [Zea mays]
          Length = 567

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 44/98 (44%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
 Frame = +3

Query: 213 FTLQNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLSQHA-SKIELPPNTS 389
           F LQNE  +  ARVMGID SS I++ SG++ G+  EH+L K+S+   H   KI LPP+T 
Sbjct: 226 FALQNEFLVDGARVMGIDASSQIILTSGRAHGVSAEHILTKVSMFHGHGMEKIHLPPDTK 285

Query: 390 AIKDLRILPNXXXXXXXXXXXXXXYSMASNNLALKYDL 503
           AI+D+ +LP               +SMA+NN+ L+YDL
Sbjct: 286 AIRDICVLPGGHVVFASLGRKLSIFSMATNNVVLQYDL 323


>gb|EMT15673.1| RING finger and WD repeat domain-containing protein 3 [Aegilops
           tauschii]
          Length = 554

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
 Frame = +3

Query: 207 CCFTLQNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLSQH-ASKIELPPN 383
           C F L  EL    ARVMGID S+ I++ SGK+PG+  EHVL KIS+LS H A  I+LPP+
Sbjct: 206 CRFVLLKELSFDGARVMGIDASNQIILASGKAPGVGGEHVLRKISMLSSHEAHTIQLPPD 265

Query: 384 TSAIKDLRILPNXXXXXXXXXXXXXXYSMASNNLALKYDL 503
           T  +KD+ ILP               +SM +N++ L+ +L
Sbjct: 266 TKVVKDICILPGGSALFASLGRRLSLFSMTTNSVVLECNL 305


>gb|AFW88253.1| transposon protein [Zea mays]
          Length = 380

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
 Frame = +3

Query: 213 FTLQNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLSQHA-SKIELPPNTS 389
           F LQNE  +  ARVMGID SS I+  SG++ G+  EH+L K+S+   H   KI LPP T 
Sbjct: 118 FALQNEFLVDGARVMGIDASSQIIFTSGRAHGVSAEHILTKVSMFHGHGMEKIHLPPGTK 177

Query: 390 AIKDLRILPNXXXXXXXXXXXXXXYSMASNNLALKYDL 503
           AI+D+ +LP               +S+A+NN+ L+YDL
Sbjct: 178 AIRDICVLPGGHVVFASLGRKLSIFSVATNNVVLQYDL 215


>gb|AFW88252.1| hypothetical protein ZEAMMB73_002791 [Zea mays]
          Length = 250

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
 Frame = +3

Query: 213 FTLQNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLSQHA-SKIELPPNTS 389
           F LQNE  +  ARVMGID SS I+  SG++ G+  EH+L K+S+   H   KI LPP T 
Sbjct: 118 FALQNEFLVDGARVMGIDASSQIIFTSGRAHGVSAEHILTKVSMFHGHGMEKIHLPPGTK 177

Query: 390 AIKDLRILPNXXXXXXXXXXXXXXYSMASNNLALKYDL 503
           AI+D+ +LP               +S+A+NN+ L+YDL
Sbjct: 178 AIRDICVLPGGHVVFASLGRKLSIFSVATNNVVLQYDL 215


>gb|AFW88256.1| hypothetical protein ZEAMMB73_888595 [Zea mays]
          Length = 407

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
 Frame = +3

Query: 222 QNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLSQHA-SKIELPPNTSAIK 398
           +NE  +  ARVMGID SS I++ SG++ G+  EH+L K+S+   H   KI LPP+T AI+
Sbjct: 69  KNEFLVDGARVMGIDASSQIILTSGRAHGVSAEHILTKVSMFHGHGMEKIHLPPDTKAIR 128

Query: 399 DLRILPNXXXXXXXXXXXXXXYSMASNNLALKYDL 503
           D+ +LP               +SMA+NN+ L+YDL
Sbjct: 129 DICVLPGGHVVFASLGRKLSIFSMATNNVVLQYDL 163


>gb|ACF87686.1| unknown [Zea mays]
          Length = 434

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
 Frame = +3

Query: 222 QNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLSQHA-SKIELPPNTSAIK 398
           +NE  +  ARVMGID SS I++ SG++ G+  EH+L K+S+   H   KI LPP+T AI+
Sbjct: 96  KNEFLVDGARVMGIDASSQIILTSGRAHGVSAEHILTKVSMFHGHGMEKIHLPPDTKAIR 155

Query: 399 DLRILPNXXXXXXXXXXXXXXYSMASNNLALKYDL 503
           D+ +LP               +SMA+NN+ L+YDL
Sbjct: 156 DICVLPGGHVVFASLGRKLSIFSMATNNVVLQYDL 190


>ref|XP_002464996.1| hypothetical protein SORBIDRAFT_01g030130 [Sorghum bicolor]
           gi|241918850|gb|EER91994.1| hypothetical protein
           SORBIDRAFT_01g030130 [Sorghum bicolor]
          Length = 571

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 41/98 (41%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
 Frame = +3

Query: 213 FTLQNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLSQHA-SKIELPPNTS 389
           F LQNE  +  ARVMGID SS I+  SG++ G+  E++L KIS+  +H   KI LP +T 
Sbjct: 232 FALQNEFLVDGARVMGIDASSQIIFTSGRAHGVGTEYILTKISMFHRHGMEKIHLPSDTK 291

Query: 390 AIKDLRILPNXXXXXXXXXXXXXXYSMASNNLALKYDL 503
           AI+D+ +LP               +S+ +NN+ L+YDL
Sbjct: 292 AIRDICVLPRGDVVFASLGRKLSLFSVTTNNVVLQYDL 329


>gb|EEE51342.1| hypothetical protein OsJ_32345 [Oryza sativa Japonica Group]
          Length = 453

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 42/94 (44%), Positives = 55/94 (58%)
 Frame = +3

Query: 222 QNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLSQHASKIELPPNTSAIKD 401
           +NE  L  ARVMGID SS I++ SG++PGI  EHVL K+S+  Q   KI LP +T AI+D
Sbjct: 111 KNEFFLDGARVMGIDASSQIILTSGRAPGIGAEHVLTKLSMSRQGLQKIHLPSDTKAIRD 170

Query: 402 LRILPNXXXXXXXXXXXXXXYSMASNNLALKYDL 503
           + ILP                SM + ++ L YDL
Sbjct: 171 ICILPGGHVVFASLGKKLSLLSMTTESVVLHYDL 204


>gb|ACR35629.1| unknown [Zea mays] gi|414864294|tpg|DAA42851.1| TPA: putative RING
           zinc finger domain superfamily protein [Zea mays]
          Length = 566

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
 Frame = +3

Query: 213 FTLQNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLS-QHASKIELPPNTS 389
           F+LQNEL +  ARV+ ID S+ I++VSG++  I  E+V+ KIS+LS +   KI LPP T 
Sbjct: 216 FSLQNELPVAGARVISIDTSNKIILVSGRANAIGAEYVVTKISMLSNREVRKIHLPPETK 275

Query: 390 AIKDLRILPNXXXXXXXXXXXXXXYSMASNNLALKYDL 503
           A++D+ ILP               +SMA++++ L +DL
Sbjct: 276 AVRDMCILPGGSAIFTSLGRRLSLFSMATDSIVLNWDL 313


>ref|NP_001132877.1| uncharacterized LOC100194370 [Zea mays] gi|194695640|gb|ACF81904.1|
           unknown [Zea mays] gi|414864295|tpg|DAA42852.1| TPA:
           putative RING zinc finger domain superfamily protein
           [Zea mays]
          Length = 594

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
 Frame = +3

Query: 213 FTLQNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLS-QHASKIELPPNTS 389
           F+LQNEL +  ARV+ ID S+ I++VSG++  I  E+V+ KIS+LS +   KI LPP T 
Sbjct: 244 FSLQNELPVAGARVISIDTSNKIILVSGRANAIGAEYVVTKISMLSNREVRKIHLPPETK 303

Query: 390 AIKDLRILPNXXXXXXXXXXXXXXYSMASNNLALKYDL 503
           A++D+ ILP               +SMA++++ L +DL
Sbjct: 304 AVRDMCILPGGSAIFTSLGRRLSLFSMATDSIVLNWDL 341


>ref|XP_003562212.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Brachypodium
           distachyon]
          Length = 446

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
 Frame = +3

Query: 222 QNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLSQHASK-IELPPNTSAIK 398
           +NEL L  ARVMGID S+ I++ S K+PG+ +EHV  KI++LS H  + I+LPP T  +K
Sbjct: 99  KNELLLDGARVMGIDASNQIILASRKAPGLGQEHVFTKINMLSTHQGREIQLPPGTKVVK 158

Query: 399 DLRILPNXXXXXXXXXXXXXXYSMASNNLALKYDL 503
           D+ IL +              +SM + ++ L+ DL
Sbjct: 159 DICILHDGSALFASLGRRLSLFSMMTESVVLQCDL 193


>ref|XP_002468674.1| hypothetical protein SORBIDRAFT_01g050080 [Sorghum bicolor]
           gi|241922528|gb|EER95672.1| hypothetical protein
           SORBIDRAFT_01g050080 [Sorghum bicolor]
          Length = 611

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 36/97 (37%), Positives = 58/97 (59%)
 Frame = +3

Query: 213 FTLQNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLSQHASKIELPPNTSA 392
           F+LQNEL +  ARV+ ID  +  ++VSG++  I  E+VL KI++ +    KI LPP+T A
Sbjct: 266 FSLQNELPVDGARVISIDACNKKILVSGRATAIGAEYVLTKINMSNHEVRKIHLPPDTKA 325

Query: 393 IKDLRILPNXXXXXXXXXXXXXXYSMASNNLALKYDL 503
           ++D+ ILP               +SM ++++ L +DL
Sbjct: 326 VRDMCILPGGSAILTSLGKKLSLFSMTTDSITLNWDL 362


>gb|EAY79407.1| hypothetical protein OsI_34535 [Oryza sativa Indica Group]
          Length = 521

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 36/65 (55%), Positives = 46/65 (70%)
 Frame = +3

Query: 222 QNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLSQHASKIELPPNTSAIKD 401
           +NE  L  ARVMGID SS I++ SG++PGI  EHVL K+S+  Q   KI LP +T AI+D
Sbjct: 213 KNEFFLDGARVMGIDASSQIILTSGRAPGIGAEHVLTKLSMSRQGLQKIHLPSDTKAIRD 272

Query: 402 LRILP 416
           + ILP
Sbjct: 273 ICILP 277


>ref|XP_004986047.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Setaria italica]
          Length = 592

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
 Frame = +3

Query: 213 FTLQNELELHEARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLSQHAS-KIELPPNTS 389
           F  Q EL L  ARV+GID S+ I++ SG++  +  EHV+ KIS+ S H   K+ LPP+T 
Sbjct: 248 FCSQYELFLDGARVIGIDASNQIILASGRAAAVGAEHVITKISMGSAHEPFKVHLPPDTK 307

Query: 390 AIKDLRILPNXXXXXXXXXXXXXXYSMASNNLALKYDL 503
           AI+D+ ILP               +SM ++++ L+ DL
Sbjct: 308 AIRDMCILPGGSAIFTSVGRKLSLFSMTTDSVVLQCDL 345


>ref|XP_002316395.1| hypothetical protein POPTR_0010s23470g [Populus trichocarpa]
           gi|222865435|gb|EEF02566.1| hypothetical protein
           POPTR_0010s23470g [Populus trichocarpa]
          Length = 605

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 4/148 (2%)
 Frame = +3

Query: 72  KMACVEHTLSGSRGQ--FEFFDKARTSASQSFYGKSFVSQFDNVLPRCCFTLQNELELHE 245
           K AC E+T     G    +FF+      +QS  G SF S     L  C F LQ+EL +  
Sbjct: 208 KPACTENTSFEQMGSKPHQFFNAKEAQGAQS--GCSFGSYSSKQLLHCNFKLQHELAIEG 265

Query: 246 ARVMGIDGSSHIVIVSGKSPGIEREHVLNKISLLSQHASK-IELPPNTSAIKDLRILP-N 419
            R+  +D S   +I++ +  G+   H+LNKI+L++   ++ I+LPP+T A+KD++I P  
Sbjct: 266 GRLFAMDFSYQNLILTRRIAGMGGMHMLNKINLINPRENEDIQLPPSTKAVKDIQISPCG 325

Query: 420 XXXXXXXXXXXXXXYSMASNNLALKYDL 503
                          SM SNN+ + Y+L
Sbjct: 326 KLTLLASLGKKLSILSMESNNIVVTYNL 353