BLASTX nr result

ID: Zingiber24_contig00029120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00029120
         (389 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530098.1| ap endonuclease, putative [Ricinus communis]...    88   1e-15
ref|XP_002322649.2| hypothetical protein POPTR_0016s04150g [Popu...    86   4e-15
gb|EMJ18784.1| hypothetical protein PRUPE_ppa019234mg, partial [...    85   1e-14
ref|XP_006293945.1| hypothetical protein CARUB_v10022937mg [Caps...    84   1e-14
ref|XP_004159624.1| PREDICTED: LOW QUALITY PROTEIN: apurinic end...    84   3e-14
ref|XP_004136679.1| PREDICTED: apurinic endonuclease-redox prote...    84   3e-14
ref|XP_006856056.1| hypothetical protein AMTR_s00059p00094000 [A...    83   3e-14
ref|XP_002274714.2| PREDICTED: apurinic endonuclease-redox prote...    83   3e-14
emb|CBI30064.3| unnamed protein product [Vitis vinifera]               83   3e-14
ref|XP_006575270.1| PREDICTED: apurinic endonuclease-redox prote...    83   4e-14
ref|NP_181677.1| apurinic endonuclease-redox protein [Arabidopsi...    83   4e-14
ref|XP_003518153.1| PREDICTED: apurinic endonuclease-redox prote...    83   4e-14
ref|XP_002879932.1| apurinic endonuclease-redox protein [Arabido...    83   4e-14
gb|ACB29409.1| apurinic endonuclease-redox protein [Arabidopsis ...    83   4e-14
emb|CAA54234.1| ARP protein [Arabidopsis thaliana]                     83   4e-14
ref|XP_006358023.1| PREDICTED: apurinic endonuclease-redox prote...    82   6e-14
ref|XP_004516362.1| PREDICTED: apurinic endonuclease-redox prote...    82   6e-14
ref|XP_004516361.1| PREDICTED: apurinic endonuclease-redox prote...    82   6e-14
gb|ESW17560.1| hypothetical protein PHAVU_007G249300g [Phaseolus...    82   7e-14
gb|EXB93956.1| Apurinic endonuclease-redox protein [Morus notabi...    82   1e-13

>ref|XP_002530098.1| ap endonuclease, putative [Ricinus communis]
           gi|223530409|gb|EEF32297.1| ap endonuclease, putative
           [Ricinus communis]
          Length = 486

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 39/46 (84%), Positives = 42/46 (91%)
 Frame = +3

Query: 3   GRKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           GRKTNKGWRLDYFLVSESISD  +DSYI PDV GSDHCPIGL+LK+
Sbjct: 441 GRKTNKGWRLDYFLVSESISDQVHDSYIVPDVTGSDHCPIGLVLKV 486


>ref|XP_002322649.2| hypothetical protein POPTR_0016s04150g [Populus trichocarpa]
           gi|550320789|gb|EEF04410.2| hypothetical protein
           POPTR_0016s04150g [Populus trichocarpa]
          Length = 516

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 38/46 (82%), Positives = 42/46 (91%)
 Frame = +3

Query: 3   GRKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           GRKTNKGWRLDYFLVSESI+D  +DSYI PDV GSDHCPIGL+LK+
Sbjct: 471 GRKTNKGWRLDYFLVSESIADKVHDSYIVPDVNGSDHCPIGLVLKV 516


>gb|EMJ18784.1| hypothetical protein PRUPE_ppa019234mg, partial [Prunus persica]
          Length = 502

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 37/46 (80%), Positives = 41/46 (89%)
 Frame = +3

Query: 3   GRKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           GRK N+GWRLDYFLVSESISD  +DSYI PD+ GSDHCPIGL+LKL
Sbjct: 457 GRKFNRGWRLDYFLVSESISDKVHDSYILPDITGSDHCPIGLVLKL 502


>ref|XP_006293945.1| hypothetical protein CARUB_v10022937mg [Capsella rubella]
           gi|482562653|gb|EOA26843.1| hypothetical protein
           CARUB_v10022937mg [Capsella rubella]
          Length = 549

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 38/46 (82%), Positives = 41/46 (89%)
 Frame = +3

Query: 3   GRKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           GRKTNKGWRLDYFLVSESI+   +DSYI PD+ GSDHCPIGLILKL
Sbjct: 504 GRKTNKGWRLDYFLVSESIAAKVHDSYILPDINGSDHCPIGLILKL 549


>ref|XP_004159624.1| PREDICTED: LOW QUALITY PROTEIN: apurinic endonuclease-redox
           protein-like [Cucumis sativus]
          Length = 501

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = +3

Query: 3   GRKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           GRKTNKGWRLDYFLVSE +++  +DSYI PDV GSDHCPIGL+LKL
Sbjct: 456 GRKTNKGWRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL 501


>ref|XP_004136679.1| PREDICTED: apurinic endonuclease-redox protein-like [Cucumis
           sativus]
          Length = 501

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = +3

Query: 3   GRKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           GRKTNKGWRLDYFLVSE +++  +DSYI PDV GSDHCPIGL+LKL
Sbjct: 456 GRKTNKGWRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVLKL 501


>ref|XP_006856056.1| hypothetical protein AMTR_s00059p00094000 [Amborella trichopoda]
           gi|548859915|gb|ERN17523.1| hypothetical protein
           AMTR_s00059p00094000 [Amborella trichopoda]
          Length = 521

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = +3

Query: 3   GRKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           GRKTNKGWRLDYFLVS+SI+D  +DSYI P++ GSDHCPIGL LKL
Sbjct: 476 GRKTNKGWRLDYFLVSDSIADKVHDSYILPEIDGSDHCPIGLTLKL 521


>ref|XP_002274714.2| PREDICTED: apurinic endonuclease-redox protein-like [Vitis
           vinifera]
          Length = 479

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 36/45 (80%), Positives = 41/45 (91%)
 Frame = +3

Query: 6   RKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           RK+NKGWRLDYFLVSESI+D  +DSYI PD+ GSDHCPIGL+LKL
Sbjct: 435 RKSNKGWRLDYFLVSESIADKVHDSYILPDIGGSDHCPIGLVLKL 479


>emb|CBI30064.3| unnamed protein product [Vitis vinifera]
          Length = 542

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 36/45 (80%), Positives = 41/45 (91%)
 Frame = +3

Query: 6   RKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           RK+NKGWRLDYFLVSESI+D  +DSYI PD+ GSDHCPIGL+LKL
Sbjct: 498 RKSNKGWRLDYFLVSESIADKVHDSYILPDIGGSDHCPIGLVLKL 542


>ref|XP_006575270.1| PREDICTED: apurinic endonuclease-redox protein-like isoform X2
           [Glycine max]
          Length = 461

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = +3

Query: 3   GRKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           GRK N+GWRLDYFLVSESI+D  +DSYI PDV GSDHCPIGL++KL
Sbjct: 416 GRKFNRGWRLDYFLVSESIADKVHDSYILPDVTGSDHCPIGLVVKL 461


>ref|NP_181677.1| apurinic endonuclease-redox protein [Arabidopsis thaliana]
           gi|8488963|sp|P45951.2|ARP_ARATH RecName: Full=Apurinic
           endonuclease-redox protein; AltName: Full=DNA-(apurinic
           or apyrimidinic site) lyase gi|3241944|gb|AAC23731.1|
           DNA-(apurinic or apyrimidinic site) lyase (ARP)
           [Arabidopsis thaliana] gi|330254890|gb|AEC09984.1|
           apurinic endonuclease-redox protein [Arabidopsis
           thaliana]
          Length = 536

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 37/46 (80%), Positives = 41/46 (89%)
 Frame = +3

Query: 3   GRKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           GRKTNKGWRLDYFLVS+SI+   +DSYI PD+ GSDHCPIGLILKL
Sbjct: 491 GRKTNKGWRLDYFLVSQSIAANVHDSYILPDINGSDHCPIGLILKL 536


>ref|XP_003518153.1| PREDICTED: apurinic endonuclease-redox protein-like isoform X1
           [Glycine max]
          Length = 507

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = +3

Query: 3   GRKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           GRK N+GWRLDYFLVSESI+D  +DSYI PDV GSDHCPIGL++KL
Sbjct: 462 GRKFNRGWRLDYFLVSESIADKVHDSYILPDVTGSDHCPIGLVVKL 507


>ref|XP_002879932.1| apurinic endonuclease-redox protein [Arabidopsis lyrata subsp.
           lyrata] gi|297325771|gb|EFH56191.1| apurinic
           endonuclease-redox protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 550

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 37/46 (80%), Positives = 41/46 (89%)
 Frame = +3

Query: 3   GRKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           GRKTN+GWRLDYFLVSESI+   +DSYI PD+ GSDHCPIGLILKL
Sbjct: 505 GRKTNRGWRLDYFLVSESIAANVHDSYILPDINGSDHCPIGLILKL 550


>gb|ACB29409.1| apurinic endonuclease-redox protein [Arabidopsis thaliana]
          Length = 538

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 37/46 (80%), Positives = 41/46 (89%)
 Frame = +3

Query: 3   GRKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           GRKTNKGWRLDYFLVS+SI+   +DSYI PD+ GSDHCPIGLILKL
Sbjct: 493 GRKTNKGWRLDYFLVSQSIAANVHDSYILPDINGSDHCPIGLILKL 538


>emb|CAA54234.1| ARP protein [Arabidopsis thaliana]
          Length = 527

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 37/46 (80%), Positives = 41/46 (89%)
 Frame = +3

Query: 3   GRKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           GRKTNKGWRLDYFLVS+SI+   +DSYI PD+ GSDHCPIGLILKL
Sbjct: 482 GRKTNKGWRLDYFLVSQSIAANVHDSYILPDINGSDHCPIGLILKL 527


>ref|XP_006358023.1| PREDICTED: apurinic endonuclease-redox protein-like [Solanum
           tuberosum]
          Length = 539

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 38/46 (82%), Positives = 40/46 (86%)
 Frame = +3

Query: 3   GRKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           GRKTNKGWRLDYFLVSE I+D  +DSYI PDV GSDH PIGLILKL
Sbjct: 494 GRKTNKGWRLDYFLVSECIADKVHDSYILPDVDGSDHSPIGLILKL 539


>ref|XP_004516362.1| PREDICTED: apurinic endonuclease-redox protein-like isoform X2
           [Cicer arietinum]
          Length = 546

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 36/46 (78%), Positives = 40/46 (86%)
 Frame = +3

Query: 3   GRKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           GRK N+GWRLDYFLVSESI D  +DSYI PDV GSDHCPIGL++KL
Sbjct: 501 GRKNNRGWRLDYFLVSESIVDKVHDSYILPDVVGSDHCPIGLVMKL 546


>ref|XP_004516361.1| PREDICTED: apurinic endonuclease-redox protein-like isoform X1
           [Cicer arietinum]
          Length = 553

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 36/46 (78%), Positives = 40/46 (86%)
 Frame = +3

Query: 3   GRKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           GRK N+GWRLDYFLVSESI D  +DSYI PDV GSDHCPIGL++KL
Sbjct: 508 GRKNNRGWRLDYFLVSESIVDKVHDSYILPDVVGSDHCPIGLVMKL 553


>gb|ESW17560.1| hypothetical protein PHAVU_007G249300g [Phaseolus vulgaris]
          Length = 508

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 36/45 (80%), Positives = 40/45 (88%)
 Frame = +3

Query: 3   GRKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILK 137
           GRK N+GWRLDYFLVSESI+D  +DSYI PDV GSDHCPIGLI+K
Sbjct: 463 GRKNNRGWRLDYFLVSESIADKVHDSYILPDVNGSDHCPIGLIVK 507


>gb|EXB93956.1| Apurinic endonuclease-redox protein [Morus notabilis]
          Length = 505

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 35/45 (77%), Positives = 39/45 (86%)
 Frame = +3

Query: 6   RKTNKGWRLDYFLVSESISDMAYDSYICPDVPGSDHCPIGLILKL 140
           RKTNKGWRLDYFL SESI+D  +DSYI PD+ GSDHCPIGL+L L
Sbjct: 461 RKTNKGWRLDYFLASESIADQVHDSYIVPDIHGSDHCPIGLVLNL 505


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