BLASTX nr result

ID: Zingiber24_contig00029079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00029079
         (306 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW66588.1| hypothetical protein ZEAMMB73_771273 [Zea mays]         61   2e-07
gb|AFW66587.1| hypothetical protein ZEAMMB73_771273 [Zea mays]         61   2e-07
gb|AFW66586.1| hypothetical protein ZEAMMB73_771273 [Zea mays]         61   2e-07
gb|AFW66585.1| hypothetical protein ZEAMMB73_771273 [Zea mays]         61   2e-07
ref|NP_001167804.1| uncharacterized protein LOC100381502 [Zea ma...    61   2e-07
gb|ACG24960.1| histone deacetylase complex subunit SAP18 [Zea ma...    61   2e-07
ref|XP_004952079.1| PREDICTED: histone deacetylase complex subun...    60   4e-07
gb|AFW69890.1| hypothetical protein ZEAMMB73_760654 [Zea mays]         60   4e-07
ref|NP_001132841.1| uncharacterized protein LOC100194333 [Zea ma...    60   4e-07
ref|XP_006646805.1| PREDICTED: histone deacetylase complex subun...    58   1e-06
ref|NP_001045723.1| Os02g0122000 [Oryza sativa Japonica Group] g...    57   2e-06
gb|EOX96141.1| SIN3 associated polypeptide P18 [Theobroma cacao]       56   6e-06
ref|XP_003573608.1| PREDICTED: histone deacetylase complex subun...    56   6e-06

>gb|AFW66588.1| hypothetical protein ZEAMMB73_771273 [Zea mays]
          Length = 156

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +3

Query: 168 MSGLVETQNRQGRPALPTQPRGPPSLARFR-EPVDREKTCPLLLRVF 305
           M+G+ +   R  RP  P Q RGPP +AR R EP+DREKTCPLLLRVF
Sbjct: 1   MAGMTDMPMRPARPGPPMQHRGPPPMARLRPEPIDREKTCPLLLRVF 47


>gb|AFW66587.1| hypothetical protein ZEAMMB73_771273 [Zea mays]
          Length = 175

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +3

Query: 168 MSGLVETQNRQGRPALPTQPRGPPSLARFR-EPVDREKTCPLLLRVF 305
           M+G+ +   R  RP  P Q RGPP +AR R EP+DREKTCPLLLRVF
Sbjct: 1   MAGMTDMPMRPARPGPPMQHRGPPPMARLRPEPIDREKTCPLLLRVF 47


>gb|AFW66586.1| hypothetical protein ZEAMMB73_771273 [Zea mays]
          Length = 121

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +3

Query: 168 MSGLVETQNRQGRPALPTQPRGPPSLARFR-EPVDREKTCPLLLRVF 305
           M+G+ +   R  RP  P Q RGPP +AR R EP+DREKTCPLLLRVF
Sbjct: 1   MAGMTDMPMRPARPGPPMQHRGPPPMARLRPEPIDREKTCPLLLRVF 47


>gb|AFW66585.1| hypothetical protein ZEAMMB73_771273 [Zea mays]
          Length = 71

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +3

Query: 168 MSGLVETQNRQGRPALPTQPRGPPSLARFR-EPVDREKTCPLLLRVF 305
           M+G+ +   R  RP  P Q RGPP +AR R EP+DREKTCPLLLRVF
Sbjct: 1   MAGMTDMPMRPARPGPPMQHRGPPPMARLRPEPIDREKTCPLLLRVF 47


>ref|NP_001167804.1| uncharacterized protein LOC100381502 [Zea mays]
           gi|195635707|gb|ACG37322.1| histone deacetylase complex
           subunit SAP18 [Zea mays]
          Length = 152

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +3

Query: 168 MSGLVETQNRQGRPALPTQPRGPPSLARFR-EPVDREKTCPLLLRVF 305
           M+G+ +   R  RP  P Q RGPP +AR R EP+DREKTCPLLLRVF
Sbjct: 1   MAGMTDMPMRPARPGPPMQHRGPPPMARLRPEPIDREKTCPLLLRVF 47


>gb|ACG24960.1| histone deacetylase complex subunit SAP18 [Zea mays]
           gi|223944073|gb|ACN26120.1| unknown [Zea mays]
           gi|413926657|gb|AFW66589.1| histone deacetylase complex
           subunit SAP18 [Zea mays] gi|413926658|gb|AFW66590.1|
           histone deacetylase complex subunit SAP18 [Zea mays]
          Length = 152

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +3

Query: 168 MSGLVETQNRQGRPALPTQPRGPPSLARFR-EPVDREKTCPLLLRVF 305
           M+G+ +   R  RP  P Q RGPP +AR R EP+DREKTCPLLLRVF
Sbjct: 1   MAGMTDMPMRPARPGPPMQHRGPPPMARLRPEPIDREKTCPLLLRVF 47


>ref|XP_004952079.1| PREDICTED: histone deacetylase complex subunit SAP18-like [Setaria
           italica]
          Length = 152

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +3

Query: 168 MSGLVETQNRQGRPALPTQPRGPPSLARFR-EPVDREKTCPLLLRVF 305
           M+G+ +   R  RP  P Q RGPP +AR R EP+DREKTCPLLLRVF
Sbjct: 1   MAGMGDMPMRPARPGPPLQHRGPPPMARLRPEPIDREKTCPLLLRVF 47


>gb|AFW69890.1| hypothetical protein ZEAMMB73_760654 [Zea mays]
          Length = 121

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +3

Query: 168 MSGLVETQNRQGRPALPTQPRGPPSLARFR-EPVDREKTCPLLLRVF 305
           M+G+ +   R  RP  P Q RGPP +AR R EP+DREKTCPLLLRVF
Sbjct: 1   MAGMGDMPMRPARPGPPMQHRGPPPMARLRPEPIDREKTCPLLLRVF 47


>ref|NP_001132841.1| uncharacterized protein LOC100194333 [Zea mays]
           gi|242063858|ref|XP_002453218.1| hypothetical protein
           SORBIDRAFT_04g001820 [Sorghum bicolor]
           gi|194695546|gb|ACF81857.1| unknown [Zea mays]
           gi|195650597|gb|ACG44766.1| histone deacetylase complex
           subunit SAP18 [Zea mays] gi|241933049|gb|EES06194.1|
           hypothetical protein SORBIDRAFT_04g001820 [Sorghum
           bicolor] gi|413935340|gb|AFW69891.1| histone deacetylase
           complex subunit SAP18 isoform 1 [Zea mays]
           gi|413935341|gb|AFW69892.1| histone deacetylase complex
           subunit SAP18 isoform 2 [Zea mays]
          Length = 152

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +3

Query: 168 MSGLVETQNRQGRPALPTQPRGPPSLARFR-EPVDREKTCPLLLRVF 305
           M+G+ +   R  RP  P Q RGPP +AR R EP+DREKTCPLLLRVF
Sbjct: 1   MAGMGDMPMRPARPGPPMQHRGPPPMARLRPEPIDREKTCPLLLRVF 47


>ref|XP_006646805.1| PREDICTED: histone deacetylase complex subunit SAP18-like [Oryza
           brachyantha]
          Length = 152

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/47 (63%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
 Frame = +3

Query: 168 MSGLVETQNRQGRPALPTQPRGPPSLARFR-EPVDREKTCPLLLRVF 305
           M+G  E   R  RP  P Q RGPP +AR R EP+DREKTCPLLLRVF
Sbjct: 1   MAGRGEMPMRPARPGPPMQYRGPPPMARARVEPIDREKTCPLLLRVF 47


>ref|NP_001045723.1| Os02g0122000 [Oryza sativa Japonica Group]
           gi|41052753|dbj|BAD07609.1| putative P18 [Oryza sativa
           Japonica Group] gi|113535254|dbj|BAF07637.1|
           Os02g0122000 [Oryza sativa Japonica Group]
           gi|125537867|gb|EAY84262.1| hypothetical protein
           OsI_05642 [Oryza sativa Indica Group]
           gi|125580615|gb|EAZ21546.1| hypothetical protein
           OsJ_05174 [Oryza sativa Japonica Group]
           gi|215768364|dbj|BAH00593.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 152

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/47 (65%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
 Frame = +3

Query: 168 MSGLVETQNRQGRPALPTQPRGPPSLARFR-EPVDREKTCPLLLRVF 305
           M+G  E   R  RP  P Q RGPP +AR R EPVDREKTCPLLLRVF
Sbjct: 1   MAGRGEMPMRPVRPGPPMQYRGPPPMARARVEPVDREKTCPLLLRVF 47


>gb|EOX96141.1| SIN3 associated polypeptide P18 [Theobroma cacao]
          Length = 153

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/47 (63%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
 Frame = +3

Query: 168 MSGLVETQNRQGRPALPTQPRGPPSLARFR-EPVDREKTCPLLLRVF 305
           M+G  E Q RQ    LP   RGPP   R R EPVDREKTCPLLLRVF
Sbjct: 1   MAGAAEAQKRQSGRPLPPPARGPPPPPRPRFEPVDREKTCPLLLRVF 47


>ref|XP_003573608.1| PREDICTED: histone deacetylase complex subunit SAP18-like
           [Brachypodium distachyon]
          Length = 151

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/47 (63%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = +3

Query: 168 MSGLVETQNRQGRPALPTQPRGPPSLARFR-EPVDREKTCPLLLRVF 305
           M+G+ E   R  RP  P Q RGPP +AR R EP+DREKTCPLLLRVF
Sbjct: 1   MAGMGEMHMRP-RPGPPMQHRGPPPMARARPEPIDREKTCPLLLRVF 46


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