BLASTX nr result

ID: Zingiber24_contig00029038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00029038
         (798 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006414286.1| hypothetical protein EUTSA_v10024666mg [Eutr...    82   2e-13

>ref|XP_006414286.1| hypothetical protein EUTSA_v10024666mg [Eutrema salsugineum]
           gi|557115456|gb|ESQ55739.1| hypothetical protein
           EUTSA_v10024666mg [Eutrema salsugineum]
          Length = 633

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 53/144 (36%), Positives = 77/144 (53%), Gaps = 4/144 (2%)
 Frame = +1

Query: 130 TTETSDREKH-KRTITNPRPFRLRVDERRILKEANQERRLQVEAQAQKKSESNLKHAXXX 306
           T   + R K+ K  +TNP+PFRLR DERRILKEAN E++ Q     ++++ + L      
Sbjct: 499 TVSANTRVKYTKPKLTNPKPFRLRTDERRILKEANTEKKQQCALSKEEETTTIL------ 552

Query: 307 XXXXXXXXXXXXXXXPSRQTSKDRSVTTLRKPLDAKLGRGNGKIENPFV--IAKG-TRPT 477
                          P+R +SK + V + R     +  R  G I  P V  +A G  RP 
Sbjct: 553 ---GFHGENLGPKHQPNRVSSK-KKVASKRTETMEEASRIKGIINKPSVCDVASGEKRPA 608

Query: 478 TVPREPNFHTVHLPRGCSKRAESK 549
           TVP+ PNFH++H+P+ C+KR  S+
Sbjct: 609 TVPKGPNFHSIHVPKSCTKRVASQ 632


Top