BLASTX nr result

ID: Zingiber24_contig00029028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00029028
         (1112 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006468344.1| PREDICTED: CAP-Gly domain-containing linker ...    59   5e-06

>ref|XP_006468344.1| PREDICTED: CAP-Gly domain-containing linker protein 1-like [Citrus
            sinensis]
          Length = 1576

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
 Frame = +1

Query: 58   QMHQSENNYPMVSCNA---NKSSSISLIMKEVNPSTREEDIG---AISDNQADFVCSKNI 219
            ++ Q EN     SC++   NK++++   + E       + IG   A ++   D V S++ 
Sbjct: 837  RVSQEENLGIQHSCDSGEMNKTANLDAKVHEKTLGPANDLIGTAQACTEGITDTVISRHE 896

Query: 220  NLQ--------DCMTLLMLDNEDDERRYMEAVERPVSPTLPEIR---ISNGGKDQSHCLV 366
             +         D M LL LDN  DE  Y  A+E P+SPTLPEI    +     ++   L 
Sbjct: 897  TMMNFEEFADGDYMKLLDLDNPADEECYRAAMEFPLSPTLPEIEFQALETFDINKFEPLA 956

Query: 367  DSIFRKPIS--EVTCEPCCYFDVIDLEINSNKL 459
            +  F   +S  +    P C +DVID+EINSNKL
Sbjct: 957  EETFYGGLSKEKENSVPSCSYDVIDVEINSNKL 989


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