BLASTX nr result

ID: Zingiber24_contig00028800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00028800
         (361 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006646806.1| PREDICTED: eukaryotic translation initiation...    66   5e-09
ref|XP_004952075.1| PREDICTED: eukaryotic translation initiation...    63   4e-08
ref|XP_002453220.1| hypothetical protein SORBIDRAFT_04g001850 [S...    61   2e-07
gb|ABR16083.1| unknown [Picea sitchensis]                              60   2e-07
ref|XP_002284709.1| PREDICTED: eukaryotic translation initiation...    59   7e-07
ref|XP_006858618.1| hypothetical protein AMTR_s00066p00018250, p...    58   1e-06
ref|XP_003573627.1| PREDICTED: eukaryotic translation initiation...    58   1e-06
ref|NP_001149775.1| eukaryotic translation initiation factor 3 s...    58   1e-06
gb|ACF85919.1| unknown [Zea mays] gi|413935345|gb|AFW69896.1| eu...    58   1e-06
ref|NP_001045725.1| Os02g0122300 [Oryza sativa Japonica Group] g...    58   1e-06
gb|ACN35925.1| unknown [Zea mays]                                      58   1e-06
gb|ACG46016.1| eukaryotic translation initiation factor 3 subuni...    58   1e-06
ref|NP_001150214.1| LOC100283844 [Zea mays] gi|195637604|gb|ACG3...    58   1e-06
gb|EMT09083.1| hypothetical protein F775_29021 [Aegilops tauschii]     57   3e-06
ref|XP_002519577.1| Eukaryotic translation initiation factor 3 s...    57   3e-06
ref|XP_004155737.1| PREDICTED: eukaryotic translation initiation...    56   6e-06
ref|XP_004140297.1| PREDICTED: eukaryotic translation initiation...    56   6e-06
dbj|BAJ99710.1| predicted protein [Hordeum vulgare subsp. vulgare]     55   7e-06
dbj|BAJ90959.1| predicted protein [Hordeum vulgare subsp. vulgare]     55   7e-06

>ref|XP_006646806.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           J-A-like [Oryza brachyantha]
          Length = 231

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 26/49 (53%), Positives = 36/49 (73%)
 Frame = -2

Query: 150 MADWEEEDFEPAAPGLVTIQPKNQWDDEDMEDENIKESWEDEGDTMESP 4
           M DW+ EDF+PAAPG      K++WDDED+E+E++KESWE+E +    P
Sbjct: 1   MEDWDSEDFQPAAPGAKAETLKSKWDDEDVEEEDVKESWEEEEEEKPKP 49


>ref|XP_004952075.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           J-A-like [Setaria italica]
          Length = 231

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 24/49 (48%), Positives = 36/49 (73%)
 Frame = -2

Query: 150 MADWEEEDFEPAAPGLVTIQPKNQWDDEDMEDENIKESWEDEGDTMESP 4
           M DW+ EDF+PAAP ++    KNQW DED+E++++K+SWE+E +    P
Sbjct: 1   MEDWDAEDFQPAAPVVIAEPLKNQWADEDVEEDDVKDSWEEEDEEKPKP 49


>ref|XP_002453220.1| hypothetical protein SORBIDRAFT_04g001850 [Sorghum bicolor]
           gi|241933051|gb|EES06196.1| hypothetical protein
           SORBIDRAFT_04g001850 [Sorghum bicolor]
          Length = 231

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 24/49 (48%), Positives = 34/49 (69%)
 Frame = -2

Query: 150 MADWEEEDFEPAAPGLVTIQPKNQWDDEDMEDENIKESWEDEGDTMESP 4
           M DW+ EDF+P AP +     KNQW DED+E++++KESWE+E +    P
Sbjct: 1   MEDWDSEDFQPVAPVVKAEPLKNQWADEDVEEDDVKESWEEEEEEKPKP 49


>gb|ABR16083.1| unknown [Picea sitchensis]
          Length = 223

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/45 (55%), Positives = 30/45 (66%)
 Frame = -2

Query: 144 DWEEEDFEPAAPGLVTIQPKNQWDDEDMEDENIKESWEDEGDTME 10
           DWE EDF P  P +   +PK  WDDED  DE++KESWEDE   +E
Sbjct: 4   DWEAEDFVPIPPVIAKEKPKGTWDDEDASDEDVKESWEDEEAIVE 48


>ref|XP_002284709.1| PREDICTED: eukaryotic translation initiation factor 3 subunit J
           [Vitis vinifera] gi|296088327|emb|CBI36772.3| unnamed
           protein product [Vitis vinifera]
          Length = 222

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 24/49 (48%), Positives = 33/49 (67%)
 Frame = -2

Query: 150 MADWEEEDFEPAAPGLVTIQPKNQWDDEDMEDENIKESWEDEGDTMESP 4
           M DWE+E   P        +PKN+WDDED++D+N+KESWEDE +   +P
Sbjct: 1   MEDWEDEPITPLGK---KEEPKNKWDDEDLDDDNVKESWEDEDEPAPAP 46


>ref|XP_006858618.1| hypothetical protein AMTR_s00066p00018250, partial [Amborella
           trichopoda] gi|548862729|gb|ERN20085.1| hypothetical
           protein AMTR_s00066p00018250, partial [Amborella
           trichopoda]
          Length = 220

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/44 (54%), Positives = 30/44 (68%)
 Frame = -2

Query: 132 EDFEPAAPGLVTIQPKNQWDDEDMEDENIKESWEDEGDTMESPK 1
           EDF P  P +   QPK  WDDED+E++N+KESWEDE D  +  K
Sbjct: 2   EDFVPIPPAVSKEQPKGLWDDEDVEEDNVKESWEDEDDAPQPKK 45


>ref|XP_003573627.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           J-A-like [Brachypodium distachyon]
          Length = 231

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 23/50 (46%), Positives = 36/50 (72%)
 Frame = -2

Query: 150 MADWEEEDFEPAAPGLVTIQPKNQWDDEDMEDENIKESWEDEGDTMESPK 1
           M DW+ EDF+P AP +   + K+ WDDED+E++++KESWE+E +    P+
Sbjct: 1   MEDWDAEDFQPVAP-IAEPKLKSNWDDEDVEEDDVKESWEEEEEEKPKPQ 49


>ref|NP_001149775.1| eukaryotic translation initiation factor 3 subunit 1 alpha, 35kDa
           [Zea mays] gi|195633795|gb|ACG36742.1| eukaryotic
           translation initiation factor 3 subunit 1 alpha, 35kDa
           [Zea mays]
          Length = 231

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/51 (50%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = -2

Query: 150 MADWEEEDFEPAAPGLVTIQP-KNQWDDEDMEDENIKESWEDEGDTMESPK 1
           M DW+ EDF+P AP +V ++P KNQW DED++ +++K+SWE+E +  E PK
Sbjct: 1   MEDWDSEDFQPVAP-VVKVEPLKNQWADEDVDADDVKDSWEEE-EEEEKPK 49


>gb|ACF85919.1| unknown [Zea mays] gi|413935345|gb|AFW69896.1| eukaryotic
           translation initiation factor 3 subunit 1 alpha, 35kDa
           [Zea mays]
          Length = 231

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/51 (50%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = -2

Query: 150 MADWEEEDFEPAAPGLVTIQP-KNQWDDEDMEDENIKESWEDEGDTMESPK 1
           M DW+ EDF+P AP +V ++P KNQW DED++ +++K+SWE+E +  E PK
Sbjct: 1   MEDWDSEDFQPVAP-VVKVEPLKNQWADEDVDADDVKDSWEEE-EEEEKPK 49


>ref|NP_001045725.1| Os02g0122300 [Oryza sativa Japonica Group]
           gi|41053010|dbj|BAD07941.1| putative eukaryotic
           translation initiation factor 3, subunit 1 alpha, 35kDa
           [Oryza sativa Japonica Group]
           gi|113535256|dbj|BAF07639.1| Os02g0122300 [Oryza sativa
           Japonica Group] gi|125537870|gb|EAY84265.1| hypothetical
           protein OsI_05645 [Oryza sativa Indica Group]
           gi|125580618|gb|EAZ21549.1| hypothetical protein
           OsJ_05177 [Oryza sativa Japonica Group]
           gi|215706412|dbj|BAG93268.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215741265|dbj|BAG97760.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 231

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 22/49 (44%), Positives = 33/49 (67%)
 Frame = -2

Query: 150 MADWEEEDFEPAAPGLVTIQPKNQWDDEDMEDENIKESWEDEGDTMESP 4
           M DW+ EDF+PA P       K++W DED+E++++KESWE+E +    P
Sbjct: 1   MEDWDSEDFQPAVPSAKAEPLKSKWADEDVEEDDVKESWEEEEEEKPKP 49


>gb|ACN35925.1| unknown [Zea mays]
          Length = 119

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 24/50 (48%), Positives = 35/50 (70%)
 Frame = -2

Query: 150 MADWEEEDFEPAAPGLVTIQPKNQWDDEDMEDENIKESWEDEGDTMESPK 1
           M DW+ E+F+P  P +     KNQW DED+E++++KESWE+E +  E PK
Sbjct: 1   MEDWDSEEFQPVVPVVKAEPLKNQWADEDVEEDDVKESWEEE-EEEEKPK 49


>gb|ACG46016.1| eukaryotic translation initiation factor 3 subunit 1 alpha, 35kDa
           [Zea mays] gi|413926660|gb|AFW66592.1| eukaryotic
           translation initiation factor 3 subunit 1 alpha, 35kDa
           [Zea mays]
          Length = 232

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 24/50 (48%), Positives = 35/50 (70%)
 Frame = -2

Query: 150 MADWEEEDFEPAAPGLVTIQPKNQWDDEDMEDENIKESWEDEGDTMESPK 1
           M DW+ E+F+P  P +     KNQW DED+E++++KESWE+E +  E PK
Sbjct: 1   MEDWDSEEFQPVVPVVKAEPLKNQWADEDVEEDDVKESWEEE-EEEEKPK 49


>ref|NP_001150214.1| LOC100283844 [Zea mays] gi|195637604|gb|ACG38270.1| eukaryotic
           translation initiation factor 3 subunit 1 alpha, 35kDa
           [Zea mays]
          Length = 232

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 24/50 (48%), Positives = 35/50 (70%)
 Frame = -2

Query: 150 MADWEEEDFEPAAPGLVTIQPKNQWDDEDMEDENIKESWEDEGDTMESPK 1
           M DW+ E+F+P  P +     KNQW DED+E++++KESWE+E +  E PK
Sbjct: 1   MEDWDSEEFQPVVPVVKAEPLKNQWADEDVEEDDVKESWEEE-EEEEKPK 49


>gb|EMT09083.1| hypothetical protein F775_29021 [Aegilops tauschii]
          Length = 230

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = -2

Query: 150 MADWEEEDFEPAAPGLVTIQP-KNQWDDEDMEDENIKESWEDEGDTMESPK 1
           M DWE +DF+P AP +V  QP K+ W+DED++++++KESWE+E    E PK
Sbjct: 1   MEDWENDDFQPIAP-VVKAQPLKSNWEDEDVDEDDVKESWEEE---EEKPK 47


>ref|XP_002519577.1| Eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223541235|gb|EEF42788.1|
           Eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 222

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/49 (46%), Positives = 33/49 (67%)
 Frame = -2

Query: 150 MADWEEEDFEPAAPGLVTIQPKNQWDDEDMEDENIKESWEDEGDTMESP 4
           M DWE+E   P    ++  QPK++WDDED++D ++KESWEDE +    P
Sbjct: 1   MEDWEDEQIPPL---ILKEQPKSKWDDEDVDDNDVKESWEDEDEPAPEP 46


>ref|XP_004155737.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           J-like [Cucumis sativus]
          Length = 220

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/49 (46%), Positives = 34/49 (69%)
 Frame = -2

Query: 150 MADWEEEDFEPAAPGLVTIQPKNQWDDEDMEDENIKESWEDEGDTMESP 4
           M DW++E+  P    L   QPKN+WDDED+++ ++KESWEDE +   +P
Sbjct: 1   MDDWDDENIPP----LQKEQPKNKWDDEDVDENDVKESWEDEDEPAPAP 45


>ref|XP_004140297.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           J-like [Cucumis sativus]
          Length = 220

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/49 (46%), Positives = 34/49 (69%)
 Frame = -2

Query: 150 MADWEEEDFEPAAPGLVTIQPKNQWDDEDMEDENIKESWEDEGDTMESP 4
           M DW++E+  P    L   QPKN+WDDED+++ ++KESWEDE +   +P
Sbjct: 1   MDDWDDENIPP----LQKEQPKNKWDDEDVDENDVKESWEDEDEPAPAP 45


>dbj|BAJ99710.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 230

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = -2

Query: 150 MADWEEEDFEPAAPGLVTIQP-KNQWDDEDMEDENIKESWEDEGDTMESP 4
           M DW+ +DF+P AP +V  QP K+ W+DED +++++KESWE+E +  + P
Sbjct: 1   MEDWDADDFQPIAP-VVKAQPLKSNWEDEDADEDDVKESWEEEEEKPKPP 49


>dbj|BAJ90959.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 230

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = -2

Query: 150 MADWEEEDFEPAAPGLVTIQP-KNQWDDEDMEDENIKESWEDEGDTMESP 4
           M DW+ +DF+P AP +V  QP K+ W+DED +++++KESWE+E +  + P
Sbjct: 1   MEDWDADDFQPIAP-VVKAQPLKSNWEDEDADEDDVKESWEEEEEKPKPP 49


Top