BLASTX nr result

ID: Zingiber24_contig00028759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00028759
         (576 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006829061.1| hypothetical protein AMTR_s00001p00257920 [A...    56   8e-06

>ref|XP_006829061.1| hypothetical protein AMTR_s00001p00257920 [Amborella trichopoda]
           gi|548834040|gb|ERM96477.1| hypothetical protein
           AMTR_s00001p00257920 [Amborella trichopoda]
          Length = 105

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 16/86 (18%)
 Frame = +3

Query: 105 MRVLKKLPVKSILEHVYPMKGTQRTVKIATLDKHGEEHL----------------VPIVA 236
           MR+  KLP+K++L+  YP +  +  V  ++  +HG E L                 P++A
Sbjct: 19  MRMATKLPIKNVLKKCYPTRTWEALVAPSSGRQHGSEQLGRGPVTNDKAPLQDDKYPVIA 78

Query: 237 VDKPRLPPELGPLIVLSFLEMSSSND 314
             KP LPP LGPL+VLS L  +SS +
Sbjct: 79  FSKPPLPPFLGPLLVLSLLNTNSSKE 104


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