BLASTX nr result
ID: Zingiber24_contig00028666
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00028666
(555 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006644981.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 254 1e-65
ref|XP_006480733.1| PREDICTED: pentatricopeptide repeat-containi... 252 5e-65
ref|XP_006429006.1| hypothetical protein CICLE_v10013887mg, part... 252 5e-65
ref|XP_004972244.1| PREDICTED: pentatricopeptide repeat-containi... 251 8e-65
gb|EMJ08970.1| hypothetical protein PRUPE_ppa026403mg, partial [... 250 2e-64
ref|XP_003549029.2| PREDICTED: pentatricopeptide repeat-containi... 249 2e-64
ref|XP_004168692.1| PREDICTED: pentatricopeptide repeat-containi... 249 3e-64
ref|XP_004142091.1| PREDICTED: pentatricopeptide repeat-containi... 249 3e-64
ref|XP_002533004.1| pentatricopeptide repeat-containing protein,... 248 7e-64
gb|EAY76437.1| hypothetical protein OsI_04370 [Oryza sativa Indi... 248 7e-64
ref|NP_001044753.1| Os01g0839400 [Oryza sativa Japonica Group] g... 248 7e-64
ref|XP_002456608.1| hypothetical protein SORBIDRAFT_03g039300 [S... 245 4e-63
ref|XP_002308477.2| hypothetical protein POPTR_0006s22970g, part... 245 6e-63
ref|XP_003564579.1| PREDICTED: pentatricopeptide repeat-containi... 244 1e-62
gb|ESW24187.1| hypothetical protein PHAVU_004G109300g [Phaseolus... 242 5e-62
gb|EXB61982.1| Pentatricopeptide repeat-containing protein [Moru... 241 1e-61
ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containi... 239 2e-61
emb|CBI32673.3| unnamed protein product [Vitis vinifera] 239 2e-61
ref|XP_004305224.1| PREDICTED: pentatricopeptide repeat-containi... 239 3e-61
emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera] 239 3e-61
>ref|XP_006644981.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g42450, mitochondrial-like [Oryza
brachyantha]
Length = 458
Score = 254 bits (648), Expect = 1e-65
Identities = 118/181 (65%), Positives = 150/181 (82%)
Frame = +2
Query: 5 YVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVI 184
Y K+ ++EAQ A ED +EPNVVSYTAL++G+LKN F DA RLF MPERN ++WNA+I
Sbjct: 88 YAKMGAVREAQGALEDTREPNVVSYTALIAGFLKNGMFGDAARLFRCMPERNAISWNAMI 147
Query: 185 GGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLGQ 364
GG S+ GLNEEAVNLFL M REG RPN+ST+PC+LT+ AN GALG+GRS HAS++K+LG+
Sbjct: 148 GGSSKAGLNEEAVNLFLDMCREGVRPNESTFPCVLTSVANAGALGVGRSIHASAIKFLGK 207
Query: 365 LDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNRM 544
LDVFV NSL+SFY+KCG L+DSV AF +++N VSWNA+ICG+ QNGRG+EA+E + RM
Sbjct: 208 LDVFVGNSLVSFYAKCGSLDDSVKAFTKIKKKNVVSWNALICGYAQNGRGEEALEAFRRM 267
Query: 545 R 547
+
Sbjct: 268 K 268
Score = 73.6 bits (179), Expect = 3e-11
Identities = 44/135 (32%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Frame = +2
Query: 146 MPERNIVAWNAVIGGCSQVGLNEE--AVNLFLTMLREGFRPNQSTYPCLLTAAANMGALG 319
MP R++V+ A +G ++ G + AV LF +L +G PN+ T+ +L +A+ + L
Sbjct: 1 MPRRDVVSATAALGALTRSGRHRGRCAVALFSRVLVDGVVPNEFTFGTILRSASALRDLR 60
Query: 320 MGRSFHASSVKYLGQLDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFG 499
+G HA K +VFV ++L+ Y+K G + ++ A E E N VS+ A+I GF
Sbjct: 61 VGAQLHACVAKLGLCSNVFVGSALVDHYAKMGAVREAQGALEDTREPNVVSYTALIAGFL 120
Query: 500 QNGRGKEAVEFYNRM 544
+NG +A + M
Sbjct: 121 KNGMFGDAARLFRCM 135
>ref|XP_006480733.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Citrus sinensis]
Length = 521
Score = 252 bits (643), Expect = 5e-65
Identities = 117/182 (64%), Positives = 146/182 (80%)
Frame = +2
Query: 2 LYVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAV 181
LY+KL+ I+EA ED PNVVSYT ++ G LK +RF DA++LF+EMP RN+V+WNA+
Sbjct: 152 LYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAM 211
Query: 182 IGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLG 361
IGG SQ G NEEAVNLF+ MLREG PN ST PC + AAAN+ ALGMG+SFHA +VK+LG
Sbjct: 212 IGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLG 271
Query: 362 QLDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNR 541
+LDVFV NSLISFY+KCG +EDS+ F+ ERN V+WNA+ICG+ QNGRG+EA+EF+ R
Sbjct: 272 KLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFKR 331
Query: 542 MR 547
MR
Sbjct: 332 MR 333
Score = 89.4 bits (220), Expect = 5e-16
Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 31/180 (17%)
Frame = +2
Query: 104 KNDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPC 283
++D+F ++F+E+P+ N+V+ +IG ++ EEA+ LF ML RP++ T+
Sbjct: 54 ESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGS 113
Query: 284 LLTAAANMGALGMGRSFHASSVKYLGQLDVFVSNSLISFYSK------------------ 409
++ ++ + L +G+ HA + K Q +VFV ++++ Y K
Sbjct: 114 VIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPN 173
Query: 410 --------CGCL-----EDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNRMRR 550
CG L ED++ F+ RN VSWNAMI G+ Q GR +EAV + M R
Sbjct: 174 VVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLR 233
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +2
Query: 83 ALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRP 262
+L+S Y K D++ +F+++ ERNIV WNAVI G +Q G EEA+ F M G RP
Sbjct: 280 SLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFKRMRINGIRP 339
Query: 263 NQSTYPCLLTAAANMGALGMGRSFHASS 346
N T LL A + G + G S+ + +
Sbjct: 340 NGVTLLGLLWACNHTGLVEKGYSYFSQA 367
>ref|XP_006429006.1| hypothetical protein CICLE_v10013887mg, partial [Citrus clementina]
gi|557531063|gb|ESR42246.1| hypothetical protein
CICLE_v10013887mg, partial [Citrus clementina]
Length = 436
Score = 252 bits (643), Expect = 5e-65
Identities = 117/182 (64%), Positives = 146/182 (80%)
Frame = +2
Query: 2 LYVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAV 181
LY+KL+ I+EA ED PNVVSYT ++ G LK +RF DA++LF+EMP RN+V+WNA+
Sbjct: 66 LYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAM 125
Query: 182 IGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLG 361
IGG SQ G NEEAVNLF+ MLREG PN ST PC + AAAN+ ALGMG+SFHA +VK+LG
Sbjct: 126 IGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLG 185
Query: 362 QLDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNR 541
+LDVFV NSLISFY+KCG +EDS+ F+ ERN V+WNA+ICG+ QNGRG+EA+EF+ R
Sbjct: 186 KLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFKR 245
Query: 542 MR 547
MR
Sbjct: 246 MR 247
Score = 70.5 bits (171), Expect = 3e-10
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 31/144 (21%)
Frame = +2
Query: 212 EEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLGQLDVFVSNSL 391
EEA+ LF ML RP++ T+ ++ ++ + L +G+ HA + K Q +VFV +++
Sbjct: 4 EEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAI 63
Query: 392 ISFYSK--------------------------CGCL-----EDSVSAFESHEERNQVSWN 478
+ Y K CG L ED++ F+ RN VSWN
Sbjct: 64 LDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWN 123
Query: 479 AMICGFGQNGRGKEAVEFYNRMRR 550
AMI G+ Q GR +EAV + M R
Sbjct: 124 AMIGGYSQTGRNEEAVNLFIEMLR 147
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +2
Query: 83 ALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRP 262
+L+S Y K D++ +F+++ ERNIV WNAVI G +Q G EEA+ F M G RP
Sbjct: 194 SLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFKRMRINGIRP 253
Query: 263 NQSTYPCLLTAAANMGALGMGRSFHASS 346
N T LL A + G + G S+ + +
Sbjct: 254 NGVTLLGLLWACNHTGLVEKGYSYFSQA 281
>ref|XP_004972244.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Setaria italica]
Length = 459
Score = 251 bits (641), Expect = 8e-65
Identities = 117/181 (64%), Positives = 147/181 (81%)
Frame = +2
Query: 5 YVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVI 184
Y K+ ++EAQ A ED EPNVVSYTAL++G LKN F +A RLF MPERN+++WNA+I
Sbjct: 86 YAKMGAMKEAQGALEDTSEPNVVSYTALIAGLLKNGMFDEADRLFRRMPERNVISWNAMI 145
Query: 185 GGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLGQ 364
GGCSQ GL+EEAVNLFL M REG PNQST+PCLLT+ AN GALG+GRS HAS++K+LG
Sbjct: 146 GGCSQAGLSEEAVNLFLEMCREGVTPNQSTFPCLLTSVANAGALGVGRSVHASAIKFLGN 205
Query: 365 LDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNRM 544
LDV+V NSL+SFY++CG LE+SV AF+ ++N VSWNA+ICG+ QNGRG+EA++ Y M
Sbjct: 206 LDVYVGNSLVSFYARCGSLENSVLAFKKIRQKNVVSWNALICGYAQNGRGEEALDAYKAM 265
Query: 545 R 547
R
Sbjct: 266 R 266
Score = 80.1 bits (196), Expect = 3e-13
Identities = 44/133 (33%), Positives = 74/133 (55%)
Frame = +2
Query: 146 MPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMG 325
MP R++V+ A IG ++ G + +A+ +F +L G PN+ T+ +L +A + A +G
Sbjct: 1 MPHRDVVSATAAIGALTRRGRHRDALAMFSRVLAGGVAPNEFTFGTVLRSATALRAPRVG 60
Query: 326 RSFHASSVKYLGQLDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQN 505
HA + K +VFV ++L+ Y+K G ++++ A E E N VS+ A+I G +N
Sbjct: 61 AQLHACAAKLGLCSNVFVGSALLDHYAKMGAMKEAQGALEDTSEPNVVSYTALIAGLLKN 120
Query: 506 GRGKEAVEFYNRM 544
G EA + RM
Sbjct: 121 GMFDEADRLFRRM 133
>gb|EMJ08970.1| hypothetical protein PRUPE_ppa026403mg, partial [Prunus persica]
Length = 451
Score = 250 bits (638), Expect = 2e-64
Identities = 116/184 (63%), Positives = 148/184 (80%)
Frame = +2
Query: 2 LYVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAV 181
LY KL++ Q+A+ A ED Q+PNVVSYT L+ YLK ++ +A++LF+ MPERN+V+WNA+
Sbjct: 71 LYAKLSITQDAKRAFEDTQKPNVVSYTTLIYAYLKKEKLEEALKLFQVMPERNVVSWNAM 130
Query: 182 IGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLG 361
IGG SQ G NEEAVNLF+ MLR G PN ST+PC + AAAN+ ALGMGRSFHA +VK+LG
Sbjct: 131 IGGYSQTGHNEEAVNLFIEMLRNGLVPNHSTFPCAIIAAANIAALGMGRSFHACAVKFLG 190
Query: 362 QLDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNR 541
+LDVF+ NSLISFY+KCG +EDS+ F EERN VSWNA+ICG+ QNG+G+EA+ F+ R
Sbjct: 191 KLDVFIGNSLISFYAKCGSMEDSLLVFNKIEERNIVSWNAVICGYAQNGKGEEAISFFER 250
Query: 542 MRRS 553
MR S
Sbjct: 251 MRLS 254
Score = 73.2 bits (178), Expect = 4e-11
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 31/146 (21%)
Frame = +2
Query: 209 NEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLGQLDVFVSNS 388
+EEA+ LF ML RPN+ T+ ++ ++ +G L +G+ HA + K +VFV ++
Sbjct: 8 HEEAIYLFSRMLLSNIRPNEFTFGTVIHSSTALGDLNIGKQLHACATKIGLHSNVFVGSA 67
Query: 389 LISFYSKCGCLEDSVSAFESHE-------------------------------ERNQVSW 475
+ Y+K +D+ AFE + ERN VSW
Sbjct: 68 TLDLYAKLSITQDAKRAFEDTQKPNVVSYTTLIYAYLKKEKLEEALKLFQVMPERNVVSW 127
Query: 476 NAMICGFGQNGRGKEAVEFYNRMRRS 553
NAMI G+ Q G +EAV + M R+
Sbjct: 128 NAMIGGYSQTGHNEEAVNLFIEMLRN 153
Score = 58.5 bits (140), Expect = 1e-06
Identities = 32/81 (39%), Positives = 46/81 (56%)
Frame = +2
Query: 83 ALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRP 262
+L+S Y K D++ +F ++ ERNIV+WNAVI G +Q G EEA++ F M +P
Sbjct: 199 SLISFYAKCGSMEDSLLVFNKIEERNIVSWNAVICGYAQNGKGEEAISFFERMRLSSCKP 258
Query: 263 NQSTYPCLLTAAANMGALGMG 325
N T LL A + G + G
Sbjct: 259 NSVTLLGLLWACNHAGLVDQG 279
>ref|XP_003549029.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Glycine max]
Length = 534
Score = 249 bits (637), Expect = 2e-64
Identities = 114/181 (62%), Positives = 146/181 (80%)
Frame = +2
Query: 2 LYVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAV 181
LY K + I++AQ A D Q PNVVSYT L+ GYLK RF DA+R+F EMPERN+V+WNA+
Sbjct: 153 LYFKQSTIEDAQKAFGDTQHPNVVSYTTLICGYLKRGRFEDALRVFHEMPERNVVSWNAM 212
Query: 182 IGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLG 361
+GGCSQ G NEEAVN F+ MLREGF PN+ST+PC++ AAAN+ +LG+G+SFHA ++K+LG
Sbjct: 213 VGGCSQTGHNEEAVNFFIGMLREGFIPNESTFPCVICAAANIASLGIGKSFHACAIKFLG 272
Query: 362 QLDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNR 541
++D FV NSLISFY+KCG +EDS+ F+ +RN VSWNAMICG+ QNGRG EA+ F+ R
Sbjct: 273 KVDQFVGNSLISFYAKCGSMEDSLLMFDKLFKRNIVSWNAMICGYAQNGRGAEAISFFER 332
Query: 542 M 544
M
Sbjct: 333 M 333
Score = 99.4 bits (246), Expect = 5e-19
Identities = 57/172 (33%), Positives = 93/172 (54%)
Frame = +2
Query: 29 EAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGL 208
EA +AH DI N+ S T FH A +LFEEM + + + +I G +
Sbjct: 41 EASVAHSDINPYNLDSTT-----------FHVACQLFEEMSDLTVASATTMIQGFVKRHC 89
Query: 209 NEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLGQLDVFVSNS 388
+E+A+ LF ML RPN+ T+ L+ ++A +G + +G+ HA ++K VFV +S
Sbjct: 90 HEDAIYLFSKMLASKIRPNEFTFGTLINSSAALGNVVVGKQLHACAMKIGLSCHVFVGSS 149
Query: 389 LISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNRM 544
L+ Y K +ED+ AF + N VS+ +ICG+ + GR ++A+ ++ M
Sbjct: 150 LLDLYFKQSTIEDAQKAFGDTQHPNVVSYTTLICGYLKRGRFEDALRVFHEM 201
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/84 (38%), Positives = 51/84 (60%)
Frame = +2
Query: 83 ALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRP 262
+L+S Y K D++ +F+++ +RNIV+WNA+I G +Q G EA++ F M EG++P
Sbjct: 281 SLISFYAKCGSMEDSLLMFDKLFKRNIVSWNAMICGYAQNGRGAEAISFFERMCSEGYKP 340
Query: 263 NQSTYPCLLTAAANMGALGMGRSF 334
N T LL A + G + G S+
Sbjct: 341 NYVTLLGLLWACNHAGLVDEGYSY 364
>ref|XP_004168692.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Cucumis sativus]
Length = 516
Score = 249 bits (636), Expect = 3e-64
Identities = 118/182 (64%), Positives = 152/182 (83%), Gaps = 1/182 (0%)
Frame = +2
Query: 2 LYVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAV 181
LYVK+ +I+EAQ A EDI+ PNVVSYT+L+SGYLK +R DA+R+F+EMPERN+V+WN++
Sbjct: 139 LYVKVGVIEEAQRAFEDIKMPNVVSYTSLISGYLKIERIRDALRVFDEMPERNVVSWNSM 198
Query: 182 IGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLG 361
IGG SQ G NE+AV+LF+ MLREG P QST+PC + AAAN+ ++G+GRSFHA +VK+ G
Sbjct: 199 IGGFSQKGHNEDAVHLFIDMLREGILPTQSTFPCAICAAANIASIGIGRSFHACAVKFFG 258
Query: 362 QLDVFVSNSLISFYSKCGCLEDSVSAFES-HEERNQVSWNAMICGFGQNGRGKEAVEFYN 538
+LDVFVSNSLISFY+KCG +EDS+ F +ERN VSWNA++ GF QNGRGKEA++FY
Sbjct: 259 KLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDERNVVSWNAVLSGFAQNGRGKEAIDFYQ 318
Query: 539 RM 544
RM
Sbjct: 319 RM 320
Score = 90.5 bits (223), Expect = 2e-16
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 31/174 (17%)
Frame = +2
Query: 122 DAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAA 301
DA +L++++P N+V+ IG C++ +EEA++LF ML RPN+ T+ ++ +A
Sbjct: 47 DARQLYDKLPHLNVVSATTAIGRCARQHQHEEALSLFSAMLVLNLRPNEFTFGTVIQSAK 106
Query: 302 NMGALGMGRSFHASSVKYLGQLDVFVSNSLISFYSKCGCLEDSVSAFESHE--------- 454
+G + +G+ H ++K ++FV ++L+ Y K G +E++ AFE +
Sbjct: 107 ALGDIHIGKQLHVCAIKTGLHSNLFVGSALLDLYVKVGVIEEAQRAFEDIKMPNVVSYTS 166
Query: 455 ----------------------ERNQVSWNAMICGFGQNGRGKEAVEFYNRMRR 550
ERN VSWN+MI GF Q G ++AV + M R
Sbjct: 167 LISGYLKIERIRDALRVFDEMPERNVVSWNSMIGGFSQKGHNEDAVHLFIDMLR 220
Score = 58.5 bits (140), Expect = 1e-06
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +2
Query: 83 ALLSGYLKNDRFHDAMRLFEEM-PERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFR 259
+L+S Y K D++ +F ++ ERN+V+WNAV+ G +Q G +EA++ + M+ G +
Sbjct: 267 SLISFYAKCGSMEDSLLVFNKLLDERNVVSWNAVLSGFAQNGRGKEAIDFYQRMILAGCK 326
Query: 260 PNQSTYPCLLTAAANMGALGMGRSF 334
PN T+ LL A + G + G S+
Sbjct: 327 PNAVTFLSLLWACNHAGLVDEGYSY 351
>ref|XP_004142091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Cucumis sativus]
Length = 516
Score = 249 bits (636), Expect = 3e-64
Identities = 118/182 (64%), Positives = 152/182 (83%), Gaps = 1/182 (0%)
Frame = +2
Query: 2 LYVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAV 181
LYVK+ +I+EAQ A EDI+ PNVVSYT+L+SGYLK +R DA+R+F+EMPERN+V+WN++
Sbjct: 139 LYVKVGVIEEAQRAFEDIKMPNVVSYTSLISGYLKIERIRDALRVFDEMPERNVVSWNSM 198
Query: 182 IGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLG 361
IGG SQ G NE+AV+LF+ MLREG P QST+PC + AAAN+ ++G+GRSFHA +VK+ G
Sbjct: 199 IGGFSQKGHNEDAVHLFIDMLREGILPTQSTFPCAICAAANIASIGIGRSFHACAVKFFG 258
Query: 362 QLDVFVSNSLISFYSKCGCLEDSVSAFES-HEERNQVSWNAMICGFGQNGRGKEAVEFYN 538
+LDVFVSNSLISFY+KCG +EDS+ F +ERN VSWNA++ GF QNGRGKEA++FY
Sbjct: 259 KLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDERNVVSWNAVLSGFAQNGRGKEAIDFYQ 318
Query: 539 RM 544
RM
Sbjct: 319 RM 320
Score = 90.9 bits (224), Expect = 2e-16
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 31/174 (17%)
Frame = +2
Query: 122 DAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAA 301
DA +L+++MP N+V+ IG C++ +EEA++LF ML RPN+ T+ ++ +
Sbjct: 47 DARQLYDKMPHLNVVSATTAIGRCARQHQHEEALSLFSAMLVLNLRPNEFTFGTVIQSPK 106
Query: 302 NMGALGMGRSFHASSVKYLGQLDVFVSNSLISFYSKCGCLEDSVSAFESHE--------- 454
+G + +G+ H ++K +VFV ++L+ Y K G +E++ AFE +
Sbjct: 107 ALGDIHIGKQLHVCAIKTGLHSNVFVGSALLDLYVKVGVIEEAQRAFEDIKMPNVVSYTS 166
Query: 455 ----------------------ERNQVSWNAMICGFGQNGRGKEAVEFYNRMRR 550
ERN VSWN+MI GF Q G ++AV + M R
Sbjct: 167 LISGYLKIERIRDALRVFDEMPERNVVSWNSMIGGFSQKGHNEDAVHLFIDMLR 220
Score = 58.5 bits (140), Expect = 1e-06
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +2
Query: 83 ALLSGYLKNDRFHDAMRLFEEM-PERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFR 259
+L+S Y K D++ +F ++ ERN+V+WNAV+ G +Q G +EA++ + M+ G +
Sbjct: 267 SLISFYAKCGSMEDSLLVFNKLLDERNVVSWNAVLSGFAQNGRGKEAIDFYQRMILAGCK 326
Query: 260 PNQSTYPCLLTAAANMGALGMGRSF 334
PN T+ LL A + G + G S+
Sbjct: 327 PNAVTFLSLLWACNHAGLVDEGYSY 351
>ref|XP_002533004.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527215|gb|EEF29379.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 519
Score = 248 bits (633), Expect = 7e-64
Identities = 116/181 (64%), Positives = 146/181 (80%)
Frame = +2
Query: 5 YVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVI 184
Y KL +EA+ A EDIQ+PNVVSYT L+ GYLK + DA++LF+EMPERN+V+WNA++
Sbjct: 144 YAKLCSFEEARNAFEDIQKPNVVSYTTLIHGYLKKGKIDDALQLFQEMPERNVVSWNAMV 203
Query: 185 GGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLGQ 364
GG SQ+G NEEAV+LF+ MLREGF PNQST+PC +T+AANM +LGMG+SFHA +VK L
Sbjct: 204 GGFSQMGHNEEAVSLFIEMLREGFMPNQSTFPCAITSAANMASLGMGKSFHACAVKSLCT 263
Query: 365 LDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNRM 544
DVFV NSL+SFY+KCG +EDS+ F +RN VSWNA+ICGF QNGRG++AV F+ RM
Sbjct: 264 SDVFVCNSLVSFYAKCGSMEDSLLVFNELPDRNTVSWNAVICGFAQNGRGEDAVIFFERM 323
Query: 545 R 547
R
Sbjct: 324 R 324
Score = 83.2 bits (204), Expect = 4e-14
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 31/174 (17%)
Frame = +2
Query: 122 DAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAA 301
D LF+EMPE ++++ +IG ++ EEA+ LF ML +PN+ T+ ++ ++
Sbjct: 51 DVDELFDEMPELDVLSVTTLIGRFARQHRYEEAMCLFSRMLLLNIKPNEFTFATVIHSST 110
Query: 302 NMGALGMGRSFHASSVKYLGQLDVFVSNSLISFYSKC----------------------- 412
+ + +G+ HA ++K VFV ++++ FY+K
Sbjct: 111 GLKNIYLGKQLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEEARNAFEDIQKPNVVSYTT 170
Query: 413 --------GCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNRMRR 550
G ++D++ F+ ERN VSWNAM+ GF Q G +EAV + M R
Sbjct: 171 LIHGYLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLR 224
Score = 61.6 bits (148), Expect = 1e-07
Identities = 34/81 (41%), Positives = 46/81 (56%)
Frame = +2
Query: 83 ALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRP 262
+L+S Y K D++ +F E+P+RN V+WNAVI G +Q G E+AV F M G RP
Sbjct: 271 SLVSFYAKCGSMEDSLLVFNELPDRNTVSWNAVICGFAQNGRGEDAVIFFERMRAAGLRP 330
Query: 263 NQSTYPCLLTAAANMGALGMG 325
N T LL A + G + G
Sbjct: 331 NSVTLLGLLCACNHAGLVEKG 351
>gb|EAY76437.1| hypothetical protein OsI_04370 [Oryza sativa Indica Group]
Length = 456
Score = 248 bits (633), Expect = 7e-64
Identities = 114/181 (62%), Positives = 149/181 (82%)
Frame = +2
Query: 5 YVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVI 184
Y K+ ++EAQ A +D +EPNVVSYTAL++G+LKN DA RLF MPERN+++WNA+I
Sbjct: 86 YAKMGSVREAQGALQDTREPNVVSYTALIAGFLKNGMSGDAARLFRCMPERNVISWNAMI 145
Query: 185 GGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLGQ 364
GG S+ GLNEEAVNLFL M REG RPN+ST+PCLLT+ AN GALG+GRS HAS++K+LG+
Sbjct: 146 GGSSKAGLNEEAVNLFLEMCREGVRPNESTFPCLLTSVANAGALGVGRSIHASAIKFLGK 205
Query: 365 LDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNRM 544
LDVF NSL+SFY++CG L+DSV AF+ + +N VSWNA+ICG+ QNGRG+EA++ + RM
Sbjct: 206 LDVFAGNSLVSFYARCGSLDDSVLAFKKIKNKNVVSWNALICGYAQNGRGEEALDAFRRM 265
Query: 545 R 547
+
Sbjct: 266 K 266
Score = 80.9 bits (198), Expect = 2e-13
Identities = 44/133 (33%), Positives = 74/133 (55%)
Frame = +2
Query: 146 MPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMG 325
MP R++V+ A IG ++ G + +AV LF +L +G PN+ T+ +L +A+ + L +G
Sbjct: 1 MPHRDVVSATAAIGALTRSGRHRDAVALFSGILGDGIVPNEFTFGTILQSASALRDLRVG 60
Query: 326 RSFHASSVKYLGQLDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQN 505
HA K +VFV ++L+ Y+K G + ++ A + E N VS+ A+I GF +N
Sbjct: 61 AQLHACVAKLGLCSNVFVGSALVDHYAKMGSVREAQGALQDTREPNVVSYTALIAGFLKN 120
Query: 506 GRGKEAVEFYNRM 544
G +A + M
Sbjct: 121 GMSGDAARLFRCM 133
Score = 55.5 bits (132), Expect = 9e-06
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 2/145 (1%)
Frame = +2
Query: 65 NVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLFLTML 244
+V + +L+S Y + D++ F+++ +N+V+WNA+I G +Q G EEA++ F M
Sbjct: 207 DVFAGNSLVSFYARCGSLDDSVLAFKKIKNKNVVSWNALICGYAQNGRGEEALDAFRRMK 266
Query: 245 REGFRPNQSTYPCLLTAAANMGALGMGRS-FHASSVKYLGQLDVFVSNSLISFYSKCGCL 421
G +P++ T LL + G + G S F + ++ G L ++ +S+
Sbjct: 267 ATGLKPDRVTLLGLLFGCNHAGLVDEGYSLFRTAEMEQPGVLRPEHYACVVDLFSRAKRF 326
Query: 422 EDSVSAFESHE-ERNQVSWNAMICG 493
+D+ E+ E V W ++I G
Sbjct: 327 DDAKRFLENLPFEPGIVFWKSLIGG 351
>ref|NP_001044753.1| Os01g0839400 [Oryza sativa Japonica Group]
gi|15623829|dbj|BAB67888.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|21104616|dbj|BAB93208.1| pentatricopeptide
(PPR) repeat-containing protein-like [Oryza sativa
Japonica Group] gi|113534284|dbj|BAF06667.1|
Os01g0839400 [Oryza sativa Japonica Group]
gi|125572581|gb|EAZ14096.1| hypothetical protein
OsJ_04019 [Oryza sativa Japonica Group]
Length = 456
Score = 248 bits (633), Expect = 7e-64
Identities = 114/181 (62%), Positives = 149/181 (82%)
Frame = +2
Query: 5 YVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVI 184
Y K+ ++EAQ A +D +EPNVVSYTAL++G+LKN DA RLF MPERN+++WNA+I
Sbjct: 86 YAKMGSVREAQGALQDTREPNVVSYTALIAGFLKNGMSGDAARLFRCMPERNVISWNAMI 145
Query: 185 GGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLGQ 364
GG S+ GLNEEAVNLFL M REG RPN+ST+PCLLT+ AN GALG+GRS HAS++K+LG+
Sbjct: 146 GGSSKAGLNEEAVNLFLEMCREGVRPNESTFPCLLTSVANAGALGVGRSIHASAIKFLGK 205
Query: 365 LDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNRM 544
LDVF NSL+SFY++CG L+DSV AF+ + +N VSWNA+ICG+ QNGRG+EA++ + RM
Sbjct: 206 LDVFAGNSLVSFYARCGSLDDSVLAFKKIKNKNVVSWNALICGYAQNGRGEEALDAFRRM 265
Query: 545 R 547
+
Sbjct: 266 K 266
Score = 80.9 bits (198), Expect = 2e-13
Identities = 44/133 (33%), Positives = 74/133 (55%)
Frame = +2
Query: 146 MPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMG 325
MP R++V+ A IG ++ G + +AV LF +L +G PN+ T+ +L +A+ + L +G
Sbjct: 1 MPHRDVVSATAAIGALTRSGRHRDAVALFSGILGDGIVPNEFTFGTILQSASALRDLRVG 60
Query: 326 RSFHASSVKYLGQLDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQN 505
HA K +VFV ++L+ Y+K G + ++ A + E N VS+ A+I GF +N
Sbjct: 61 AQLHACVAKLGLCSNVFVGSALVDHYAKMGSVREAQGALQDTREPNVVSYTALIAGFLKN 120
Query: 506 GRGKEAVEFYNRM 544
G +A + M
Sbjct: 121 GMSGDAARLFRCM 133
>ref|XP_002456608.1| hypothetical protein SORBIDRAFT_03g039300 [Sorghum bicolor]
gi|241928583|gb|EES01728.1| hypothetical protein
SORBIDRAFT_03g039300 [Sorghum bicolor]
Length = 458
Score = 245 bits (626), Expect = 4e-63
Identities = 112/181 (61%), Positives = 146/181 (80%)
Frame = +2
Query: 5 YVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVI 184
Y K+ ++EA +D +EPNVVSYTAL++G LKN F +A RLF MPERN+V+WNA+I
Sbjct: 86 YAKMGAMREAHGVLDDTREPNVVSYTALIAGLLKNGMFDEADRLFRRMPERNVVSWNAMI 145
Query: 185 GGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLGQ 364
GGCSQ GL+EEAVNLFL M REG PN+ST+PC+LT+ AN GALG+GRS HAS++K+LG+
Sbjct: 146 GGCSQAGLSEEAVNLFLEMCREGVTPNESTFPCVLTSVANAGALGVGRSVHASAIKFLGK 205
Query: 365 LDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNRM 544
LDV++ NSL+SFY++CG LEDSV AF+ +N VSWNA+ICG+ QNG+G+EA++ Y M
Sbjct: 206 LDVYIGNSLVSFYARCGSLEDSVLAFKKMNRKNVVSWNALICGYAQNGKGEEALDAYRMM 265
Query: 545 R 547
R
Sbjct: 266 R 266
Score = 77.4 bits (189), Expect = 2e-12
Identities = 43/133 (32%), Positives = 72/133 (54%)
Frame = +2
Query: 146 MPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMG 325
MP R++V+ A IG ++ G + +A+ LF +L +G PN+ T+ +L +A + A G
Sbjct: 1 MPHRDVVSATAAIGALTRRGRHRDALALFSQVLADGVAPNEFTFGTVLRSATALRAPRAG 60
Query: 326 RSFHASSVKYLGQLDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQN 505
HA + K +VFV ++L+ Y+K G + ++ + E N VS+ A+I G +N
Sbjct: 61 VQLHACAAKLGLCSNVFVGSALLDHYAKMGAMREAHGVLDDTREPNVVSYTALIAGLLKN 120
Query: 506 GRGKEAVEFYNRM 544
G EA + RM
Sbjct: 121 GMFDEADRLFRRM 133
>ref|XP_002308477.2| hypothetical protein POPTR_0006s22970g, partial [Populus
trichocarpa] gi|550336903|gb|EEE92000.2| hypothetical
protein POPTR_0006s22970g, partial [Populus trichocarpa]
Length = 441
Score = 245 bits (625), Expect = 6e-63
Identities = 118/183 (64%), Positives = 141/183 (77%)
Frame = +2
Query: 5 YVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVI 184
Y KL IQEAQ A EDIQ PN+VSYTAL+ GYLK RF +A LF++MPERNIV WNA+I
Sbjct: 87 YAKLGSIQEAQRAFEDIQHPNIVSYTALIHGYLKKGRFEEAFELFKQMPERNIVTWNAMI 146
Query: 185 GGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLGQ 364
GG SQ+G NEEAVNLF+ M+REG P Q T+PC + AAAN+ AL MGRSFHA ++K +G+
Sbjct: 147 GGFSQMGQNEEAVNLFVEMIREGLVPCQYTFPCAIIAAANIAALEMGRSFHACAIKTMGE 206
Query: 365 LDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNRM 544
VFV NSLISFY+KCG +EDS+ F ER VSWNA+ICGF QNGRG+ AV+FY RM
Sbjct: 207 FSVFVGNSLISFYAKCGSMEDSLRLFYELPERTIVSWNAVICGFAQNGRGENAVDFYERM 266
Query: 545 RRS 553
R +
Sbjct: 267 RNT 269
Score = 70.5 bits (171), Expect = 3e-10
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +2
Query: 83 ALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRP 262
+L+S Y K D++RLF E+PER IV+WNAVI G +Q G E AV+ + M RP
Sbjct: 214 SLISFYAKCGSMEDSLRLFYELPERTIVSWNAVICGFAQNGRGENAVDFYERMRNTSLRP 273
Query: 263 NQSTYPCLLTAAANMGALGMGRS-FHASSVKYLGQLDVFVSNSLISFYSKCGCLEDS 430
+ T LL A + G + G S F+ + +++ L ++ S+CGC +++
Sbjct: 274 DSVTLLGLLWACNHAGLVDKGYSYFNRARLEHPSLLKPKHYACMVDLLSRCGCFKEA 330
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/102 (32%), Positives = 61/102 (59%)
Frame = +2
Query: 239 MLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLGQLDVFVSNSLISFYSKCGC 418
ML PN+ T+ ++ ++ ++G L +GR F A ++K VFV ++++ Y+K G
Sbjct: 33 MLFLNVTPNEFTFGTVIHSSTSLGDLNLGRQFQACAMKMGLNYMVFVGSAVLDSYAKLGS 92
Query: 419 LEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNRM 544
++++ AFE + N VS+ A+I G+ + GR +EA E + +M
Sbjct: 93 IQEAQRAFEDIQHPNIVSYTALIHGYLKKGRFEEAFELFKQM 134
>ref|XP_003564579.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Brachypodium distachyon]
Length = 456
Score = 244 bits (623), Expect = 1e-62
Identities = 114/181 (62%), Positives = 144/181 (79%)
Frame = +2
Query: 5 YVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVI 184
Y K+ + EAQ A D EPNVVSYTAL++G+LKN F DA RLF+ MPERN+V+WNA+I
Sbjct: 86 YAKMGAMAEAQSALGDTHEPNVVSYTALIAGFLKNGMFDDAHRLFQCMPERNVVSWNAMI 145
Query: 185 GGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLGQ 364
GGCSQ GLNEEAV LFL M R+G RPN ST+PC+LT+ AN GALG+GRS HAS++K LG+
Sbjct: 146 GGCSQAGLNEEAVGLFLEMCRQGVRPNDSTFPCVLTSVANAGALGVGRSVHASAIKLLGK 205
Query: 365 LDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNRM 544
LDV++ NSL+S Y++CG LEDSV AF +++N V+WNA+ICG+ QNGRG+EA+ Y M
Sbjct: 206 LDVYIGNSLVSCYARCGSLEDSVLAFRKMKQKNLVTWNALICGYAQNGRGQEALGAYETM 265
Query: 545 R 547
R
Sbjct: 266 R 266
Score = 79.7 bits (195), Expect = 4e-13
Identities = 45/133 (33%), Positives = 73/133 (54%)
Frame = +2
Query: 146 MPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMG 325
MP R++VA A IG ++ + +AV LF +L +G PN+ T+ +L +A + L +G
Sbjct: 1 MPYRDVVAATAAIGALTRGSRHRDAVTLFSRVLSDGIPPNEFTFGTVLRSATALRDLRVG 60
Query: 326 RSFHASSVKYLGQLDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQN 505
HA K+ +VFV ++L+ Y+K G + ++ SA E N VS+ A+I GF +N
Sbjct: 61 TQLHACVAKFGLCSNVFVGSALVDHYAKMGAMAEAQSALGDTHEPNVVSYTALIAGFLKN 120
Query: 506 GRGKEAVEFYNRM 544
G +A + M
Sbjct: 121 GMFDDAHRLFQCM 133
>gb|ESW24187.1| hypothetical protein PHAVU_004G109300g [Phaseolus vulgaris]
Length = 532
Score = 242 bits (617), Expect = 5e-62
Identities = 109/181 (60%), Positives = 145/181 (80%)
Frame = +2
Query: 2 LYVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAV 181
LY KL+ ++AQ A D PNVVSYT L+ GYLK RF +A+++F EMPERN+V+WNA+
Sbjct: 151 LYFKLSTTEDAQKAFRDTLHPNVVSYTTLICGYLKRGRFEEALQVFHEMPERNVVSWNAM 210
Query: 182 IGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLG 361
+GGCSQ G NEEAVN F+ MLREGF PN+ST+PC++ AAAN+ +LG+G+SFHA ++K+LG
Sbjct: 211 VGGCSQTGHNEEAVNFFIGMLREGFIPNESTFPCVICAAANIASLGVGKSFHACAIKFLG 270
Query: 362 QLDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNR 541
++D FV NSLISFY+KCG ++DS+ F+ +RN VSWNA+ICG+ QNGRG EA+ F+ R
Sbjct: 271 KVDQFVGNSLISFYAKCGSMDDSLLMFDKLFKRNIVSWNAVICGYAQNGRGVEAISFFER 330
Query: 542 M 544
M
Sbjct: 331 M 331
Score = 89.0 bits (219), Expect = 7e-16
Identities = 54/172 (31%), Positives = 84/172 (48%)
Frame = +2
Query: 29 EAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGL 208
EA H+DI + S T FH A +FEEM + + +I G +
Sbjct: 39 EASAVHKDINAYGLDSTT-----------FHVACHMFEEMSGLTVASATTIIQGFVKRHC 87
Query: 209 NEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLGQLDVFVSNS 388
E+A++LF ML RPN+ T+ +L ++ + G +GR HA ++K VFV
Sbjct: 88 YEDAIHLFCKMLASEIRPNEFTFGTVLNSSTSHGNFIVGRQLHACAMKVGLSCHVFVGTP 147
Query: 389 LISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNRM 544
L+ Y K ED+ AF N VS+ +ICG+ + GR +EA++ ++ M
Sbjct: 148 LLDLYFKLSTTEDAQKAFRDTLHPNVVSYTTLICGYLKRGRFEEALQVFHEM 199
Score = 60.5 bits (145), Expect = 3e-07
Identities = 33/84 (39%), Positives = 51/84 (60%)
Frame = +2
Query: 83 ALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRP 262
+L+S Y K D++ +F+++ +RNIV+WNAVI G +Q G EA++ F M EG++P
Sbjct: 279 SLISFYAKCGSMDDSLLMFDKLFKRNIVSWNAVICGYAQNGRGVEAISFFERMGFEGYKP 338
Query: 263 NQSTYPCLLTAAANMGALGMGRSF 334
N T LL A + G + G S+
Sbjct: 339 NDVTLLGLLWACNHAGLVDEGYSY 362
>gb|EXB61982.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
Length = 811
Score = 241 bits (614), Expect = 1e-61
Identities = 115/184 (62%), Positives = 144/184 (78%)
Frame = +2
Query: 2 LYVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAV 181
LY KL++I++A A ED + PNVVSYT L+ GYLK +R DA LF MP+RNIV+WNA+
Sbjct: 357 LYCKLSVIEDACKAFEDTRVPNVVSYTTLICGYLKKNRIEDAHHLFRLMPQRNIVSWNAM 416
Query: 182 IGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLG 361
IGG SQ G NEEA+NLF+ +LREG PNQST+PC +TAAAN+ ALG+GRSFHA +VK+LG
Sbjct: 417 IGGYSQTGHNEEALNLFVELLREGLIPNQSTFPCAITAAANVAALGIGRSFHACAVKFLG 476
Query: 362 QLDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNR 541
+ DVFVSNSL+SFY+KCG +E S+ F ER VSWNAMICG+ QNGRG EA+ F+ +
Sbjct: 477 KPDVFVSNSLVSFYAKCGSMESSLLVFNKLRERTTVSWNAMICGYAQNGRGHEAIIFFEK 536
Query: 542 MRRS 553
M+ S
Sbjct: 537 MQES 540
Score = 81.3 bits (199), Expect = 1e-13
Identities = 45/147 (30%), Positives = 78/147 (53%)
Frame = +2
Query: 104 KNDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPC 283
+++ F DA++ F + E ++V+ A+IG + EAV LF ML RPN+ T+
Sbjct: 259 RSNAFLDALQWFNKASELSVVSATAIIGRFVWWSRDREAVYLFSRMLASNIRPNEFTFGT 318
Query: 284 LLTAAANMGALGMGRSFHASSVKYLGQLDVFVSNSLISFYSKCGCLEDSVSAFESHEERN 463
L+ ++ + +G+ HA + K +VFV ++L+ Y K +ED+ AFE N
Sbjct: 319 LVRSSIAQKDVHVGKQLHACATKVGLHKNVFVGSALVDLYCKLSVIEDACKAFEDTRVPN 378
Query: 464 QVSWNAMICGFGQNGRGKEAVEFYNRM 544
VS+ +ICG+ + R ++A + M
Sbjct: 379 VVSYTTLICGYLKKNRIEDAHHLFRLM 405
>ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Vitis vinifera]
Length = 538
Score = 239 bits (611), Expect = 2e-61
Identities = 109/181 (60%), Positives = 142/181 (78%)
Frame = +2
Query: 5 YVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVI 184
Y KL I EAQ A ED EPNVVSYT L+ GYLK +RF DA+ LF +MPERN+V+WNA+I
Sbjct: 156 YAKLTSINEAQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRKMPERNVVSWNAMI 215
Query: 185 GGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLGQ 364
G SQ+G NEEAVNLF+ MLREG PN+ T+PC ++A AN+ ALGMGRSFH S+VK+LG+
Sbjct: 216 SGYSQMGYNEEAVNLFVVMLREGTLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGK 275
Query: 365 LDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNRM 544
DVF+ NSL+SFY+KCG +E+S+ F + ++N VSWNA+ICG+ +GRG EA+ F+ +M
Sbjct: 276 FDVFIGNSLVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKM 335
Query: 545 R 547
+
Sbjct: 336 Q 336
Score = 88.6 bits (218), Expect = 9e-16
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 31/197 (15%)
Frame = +2
Query: 53 IQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLF 232
I EP++V Y + DA +LF+E+P ++V+ A IG ++ +EEA+ F
Sbjct: 46 ILEPDIVC------SYSASKALWDACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFF 99
Query: 233 LTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLGQLDVFVSNSLISFYSKC 412
ML +PNQ ++ ++ ++ + L GR HA ++K + +VFV ++++ FY+K
Sbjct: 100 SRMLALNIKPNQFSFGTVIPSSTALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKL 159
Query: 413 GCLEDSVSAFE-SHE------------------------------ERNQVSWNAMICGFG 499
+ ++ AFE +HE ERN VSWNAMI G+
Sbjct: 160 TSINEAQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRKMPERNVVSWNAMISGYS 219
Query: 500 QNGRGKEAVEFYNRMRR 550
Q G +EAV + M R
Sbjct: 220 QMGYNEEAVNLFVVMLR 236
Score = 56.2 bits (134), Expect = 5e-06
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Frame = +2
Query: 83 ALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRP 262
+L+S Y K +++ +F +P++NIV+WNA+I G + G EA+ F M G RP
Sbjct: 283 SLVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQDTGLRP 342
Query: 263 NQSTYPCLLTAAANMGALGMGRS-FHASSVKYLGQLDVFVSNSLISFYSKCGCLEDS 430
N T LL A + G + G S F+ + V+ G L ++ S+ G +++
Sbjct: 343 NSVTLLGLLLACNHSGLVDKGYSYFNKARVEEPGLLTPEHHACMVDLLSRSGRFKEA 399
>emb|CBI32673.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 239 bits (611), Expect = 2e-61
Identities = 109/181 (60%), Positives = 142/181 (78%)
Frame = +2
Query: 5 YVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVI 184
Y KL I EAQ A ED EPNVVSYT L+ GYLK +RF DA+ LF +MPERN+V+WNA+I
Sbjct: 437 YAKLTSINEAQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRKMPERNVVSWNAMI 496
Query: 185 GGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLGQ 364
G SQ+G NEEAVNLF+ MLREG PN+ T+PC ++A AN+ ALGMGRSFH S+VK+LG+
Sbjct: 497 SGYSQMGYNEEAVNLFVVMLREGTLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGK 556
Query: 365 LDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNRM 544
DVF+ NSL+SFY+KCG +E+S+ F + ++N VSWNA+ICG+ +GRG EA+ F+ +M
Sbjct: 557 FDVFIGNSLVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKM 616
Query: 545 R 547
+
Sbjct: 617 Q 617
Score = 88.6 bits (218), Expect = 9e-16
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 31/197 (15%)
Frame = +2
Query: 53 IQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLF 232
I EP++V Y + DA +LF+E+P ++V+ A IG ++ +EEA+ F
Sbjct: 327 ILEPDIVC------SYSASKALWDACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFF 380
Query: 233 LTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLGQLDVFVSNSLISFYSKC 412
ML +PNQ ++ ++ ++ + L GR HA ++K + +VFV ++++ FY+K
Sbjct: 381 SRMLALNIKPNQFSFGTVIPSSTALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKL 440
Query: 413 GCLEDSVSAFE-SHE------------------------------ERNQVSWNAMICGFG 499
+ ++ AFE +HE ERN VSWNAMI G+
Sbjct: 441 TSINEAQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRKMPERNVVSWNAMISGYS 500
Query: 500 QNGRGKEAVEFYNRMRR 550
Q G +EAV + M R
Sbjct: 501 QMGYNEEAVNLFVVMLR 517
Score = 56.2 bits (134), Expect = 5e-06
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Frame = +2
Query: 83 ALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRP 262
+L+S Y K +++ +F +P++NIV+WNA+I G + G EA+ F M G RP
Sbjct: 564 SLVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQDTGLRP 623
Query: 263 NQSTYPCLLTAAANMGALGMGRS-FHASSVKYLGQLDVFVSNSLISFYSKCGCLEDS 430
N T LL A + G + G S F+ + V+ G L ++ S+ G +++
Sbjct: 624 NSVTLLGLLLACNHSGLVDKGYSYFNKARVEEPGLLTPEHHACMVDLLSRSGRFKEA 680
>ref|XP_004305224.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 507
Score = 239 bits (610), Expect = 3e-61
Identities = 112/181 (61%), Positives = 143/181 (79%)
Frame = +2
Query: 2 LYVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAV 181
LY KL++IQ+A+ A ED Q+PNVVSYT L+ YLK + DA+ LF+ MPERN+V+WNA+
Sbjct: 140 LYAKLSIIQDARRAFEDTQKPNVVSYTTLICAYLKKEMLEDALELFKVMPERNVVSWNAM 199
Query: 182 IGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLG 361
IGG SQ G NEEAVNLF+ MLR G P+QST+PC + AAAN+ ALG+GRSFHA +VK LG
Sbjct: 200 IGGYSQTGHNEEAVNLFIEMLRNGLVPSQSTFPCAIIAAANIAALGIGRSFHACAVKALG 259
Query: 362 QLDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNR 541
+ DVF+SNSLISFY+KCG +EDS+ F RN VSWNA+ICG+ QNG+G+EA+ F+ +
Sbjct: 260 KFDVFISNSLISFYAKCGSMEDSLLVFNRLRGRNIVSWNAVICGYAQNGKGEEAISFFEK 319
Query: 542 M 544
M
Sbjct: 320 M 320
Score = 94.7 bits (234), Expect = 1e-17
Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 31/180 (17%)
Frame = +2
Query: 107 NDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCL 286
+D F +A ++F+E P+ N+V+ +IG ++ +EEAV+LF ML RPN+ T+ +
Sbjct: 43 SDAFLNAQQVFDETPDLNVVSATTIIGSFARQHHHEEAVHLFSRMLVLNIRPNEYTFGTV 102
Query: 287 LTAAANMGALGMGRSFHASSVKYLGQLDVFVSNSLISFYSKCGCLEDSVSAFESHE---- 454
+ ++ +G L +G+ HA + K +VFV ++++ Y+K ++D+ AFE +
Sbjct: 103 IPSSTVLGDLSIGKQLHAFATKMGLHSNVFVGSAMLDLYAKLSIIQDARRAFEDTQKPNV 162
Query: 455 ---------------------------ERNQVSWNAMICGFGQNGRGKEAVEFYNRMRRS 553
ERN VSWNAMI G+ Q G +EAV + M R+
Sbjct: 163 VSYTTLICAYLKKEMLEDALELFKVMPERNVVSWNAMIGGYSQTGHNEEAVNLFIEMLRN 222
Score = 57.8 bits (138), Expect = 2e-06
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Frame = +2
Query: 83 ALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRP 262
+L+S Y K D++ +F + RNIV+WNAVI G +Q G EEA++ F M +P
Sbjct: 268 SLISFYAKCGSMEDSLLVFNRLRGRNIVSWNAVICGYAQNGKGEEAISFFEKMSVSECKP 327
Query: 263 NQSTYPCLLTAAANMGALGMGRS-FHASSVKYLGQLDVFVSNSLISFYSKCGCLEDS 430
N T LL A + G + G S F+ + + G L ++ S+ GC +
Sbjct: 328 NSVTLLGLLWACNHAGLVDKGYSYFNQARTEEPGILKPEHYACMVDLLSRSGCFRQA 384
>emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]
Length = 795
Score = 239 bits (610), Expect = 3e-61
Identities = 109/181 (60%), Positives = 141/181 (77%)
Frame = +2
Query: 5 YVKLAMIQEAQIAHEDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVI 184
Y KL I EAQ A ED EPNVVSYT L+ GYLK +RF DA+ LF MPERN+V+WNA+I
Sbjct: 413 YAKLTSINEAQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRXMPERNVVSWNAMI 472
Query: 185 GGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLGQ 364
G SQ+G NEEAVNLF+ MLREG PN+ T+PC ++A AN+ ALGMGRSFH S+VK+LG+
Sbjct: 473 SGYSQMGYNEEAVNLFVVMLREGXLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGK 532
Query: 365 LDVFVSNSLISFYSKCGCLEDSVSAFESHEERNQVSWNAMICGFGQNGRGKEAVEFYNRM 544
DVF+ NSL+SFY+KCG +E+S+ F + ++N VSWNA+ICG+ +GRG EA+ F+ +M
Sbjct: 533 FDVFIGNSLVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKM 592
Query: 545 R 547
+
Sbjct: 593 Q 593
Score = 91.3 bits (225), Expect = 1e-16
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 38/214 (17%)
Frame = +2
Query: 23 IQEAQIAH-------EDIQEPNVVSYTALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAV 181
++E+Q AH I EP++V Y + DA +LF+E+P ++V+ A
Sbjct: 286 LKESQRAHGRAVKLGTTILEPDIVC------SYSASKELWDACKLFDEVPNWDVVSATAT 339
Query: 182 IGGCSQVGLNEEAVNLFLTMLREGFRPNQSTYPCLLTAAANMGALGMGRSFHASSVKYLG 361
IG ++ +EEA+ F ML +PNQ ++ ++ +A + L GR HA ++K
Sbjct: 340 IGCFARYHHHEEAIYFFSRMLALNIKPNQFSFGTVIPSATALQDLNSGRQLHACAIKMGL 399
Query: 362 QLDVFVSNSLISFYSKCGCLEDSVSAFE-SHE---------------------------- 454
+ +VFV ++++ FY+K + ++ AFE +HE
Sbjct: 400 ESNVFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYTTLIRGYLKKERFDDALALFRX 459
Query: 455 --ERNQVSWNAMICGFGQNGRGKEAVEFYNRMRR 550
ERN VSWNAMI G+ Q G +EAV + M R
Sbjct: 460 MPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLR 493
Score = 56.2 bits (134), Expect = 5e-06
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Frame = +2
Query: 83 ALLSGYLKNDRFHDAMRLFEEMPERNIVAWNAVIGGCSQVGLNEEAVNLFLTMLREGFRP 262
+L+S Y K +++ +F +P++NIV+WNA+I G + G EA+ F M G RP
Sbjct: 540 SLVSFYAKCGSMEESLLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQDTGLRP 599
Query: 263 NQSTYPCLLTAAANMGALGMGRS-FHASSVKYLGQLDVFVSNSLISFYSKCGCLEDS 430
N T LL A + G + G S F+ + V+ G L ++ S+ G +++
Sbjct: 600 NSVTLLGLLLACNHSGLVDKGYSYFNKARVEEPGLLTPEHHACMVDLLSRSGRFKEA 656