BLASTX nr result
ID: Zingiber24_contig00028620
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00028620
(629 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004951592.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik... 81 2e-13
gb|EMS51826.1| SWI/SNF complex subunit SWI3B [Triticum urartu] 80 5e-13
dbj|BAK02539.1| predicted protein [Hordeum vulgare subsp. vulgare] 79 1e-12
gb|EMT14023.1| SWI/SNF complex subunit SWI3B [Aegilops tauschii] 78 2e-12
ref|NP_001046174.1| Os02g0194000 [Oryza sativa Japonica Group] g... 75 2e-11
gb|EAZ22070.1| hypothetical protein OsJ_05733 [Oryza sativa Japo... 75 2e-11
gb|EAY84848.1| hypothetical protein OsI_06214 [Oryza sativa Indi... 75 2e-11
ref|XP_003571061.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik... 74 4e-11
ref|XP_006646993.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik... 73 8e-11
ref|NP_001141323.1| uncharacterized protein LOC100273414 [Zea ma... 70 5e-10
ref|XP_002451710.1| hypothetical protein SORBIDRAFT_04g006410 [S... 70 6e-10
ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vi... 68 2e-09
emb|CAN64878.1| hypothetical protein VITISV_030794 [Vitis vinifera] 65 1e-08
ref|XP_006473852.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik... 63 8e-08
ref|XP_006435443.1| hypothetical protein CICLE_v10001069mg [Citr... 63 8e-08
ref|XP_006581127.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik... 62 2e-07
ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik... 62 2e-07
gb|EOY15890.1| Switch subunit 3, putative isoform 1 [Theobroma c... 60 7e-07
ref|XP_006849963.1| hypothetical protein AMTR_s00022p00147330 [A... 59 1e-06
ref|XP_004500828.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik... 58 3e-06
>ref|XP_004951592.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Setaria italica]
Length = 497
Score = 81.3 bits (199), Expect = 2e-13
Identities = 43/109 (39%), Positives = 66/109 (60%)
Frame = +3
Query: 3 KLHSAADGAKEEDSPAVDQQAYSEILSVAAAEAQAKLETEQKDVERYISDIVQVQMKEIQ 182
++ S+ + A EE+S + + +++L AA A+A+LE E+ ++E+ +SDIV VQMKEIQ
Sbjct: 377 EIDSSINSAMEEESSHTNGLSVNDLLKEAATNARAQLEKERSNIEQSLSDIVDVQMKEIQ 436
Query: 183 DKIIHFXXXXXXXXXXXXXXRHMKDLLFEDQLTYLQHNTRPISKGAEGQ 329
DKI F R ++DLLF DQLT +QH+ RP + E +
Sbjct: 437 DKICRFEHKEMLMEKERQQLRCLRDLLFADQLTVMQHHRRPQAVATESK 485
>gb|EMS51826.1| SWI/SNF complex subunit SWI3B [Triticum urartu]
Length = 630
Score = 80.1 bits (196), Expect = 5e-13
Identities = 42/106 (39%), Positives = 60/106 (56%)
Frame = +3
Query: 12 SAADGAKEEDSPAVDQQAYSEILSVAAAEAQAKLETEQKDVERYISDIVQVQMKEIQDKI 191
S KEE+S + +++L A+ AQ +L+ EQKD+E+ +S IV VQMKEIQDKI
Sbjct: 513 SPISSTKEEESSYTNGLTANDLLKEASTNAQVQLQKEQKDIEQSLSAIVDVQMKEIQDKI 572
Query: 192 IHFXXXXXXXXXXXXXXRHMKDLLFEDQLTYLQHNTRPISKGAEGQ 329
F H+++LLF DQL +QH RP++ AE +
Sbjct: 573 SRFEQKELLMEKEREQLHHLRELLFVDQLAVVQHQRRPLAVAAENK 618
>dbj|BAK02539.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 79.0 bits (193), Expect = 1e-12
Identities = 43/106 (40%), Positives = 60/106 (56%)
Frame = +3
Query: 12 SAADGAKEEDSPAVDQQAYSEILSVAAAEAQAKLETEQKDVERYISDIVQVQMKEIQDKI 191
S KEE+S + + +++L A+A AQ +L+ EQKD+E+ +S IV VQMKEIQDKI
Sbjct: 376 SPTSSTKEEESSYTNGLSDTDLLKEASANAQVQLQKEQKDIEQSLSAIVDVQMKEIQDKI 435
Query: 192 IHFXXXXXXXXXXXXXXRHMKDLLFEDQLTYLQHNTRPISKGAEGQ 329
F H+++LLF DQL +QH RP AE +
Sbjct: 436 SRFEQKELLMEKEREQLHHLRELLFMDQLAVVQHQRRPHVVAAENK 481
>gb|EMT14023.1| SWI/SNF complex subunit SWI3B [Aegilops tauschii]
Length = 493
Score = 78.2 bits (191), Expect = 2e-12
Identities = 42/106 (39%), Positives = 60/106 (56%)
Frame = +3
Query: 12 SAADGAKEEDSPAVDQQAYSEILSVAAAEAQAKLETEQKDVERYISDIVQVQMKEIQDKI 191
S KEE+S + + +++L A+ AQ +L+ EQKD+E+ +S IV VQMKEIQDKI
Sbjct: 376 SPISSTKEEESSYTNGFSANDLLKEASTNAQVQLQKEQKDIEQSLSAIVDVQMKEIQDKI 435
Query: 192 IHFXXXXXXXXXXXXXXRHMKDLLFEDQLTYLQHNTRPISKGAEGQ 329
F H+++LLF DQL +QH RP + AE +
Sbjct: 436 SRFEQKELLMEKEREQLHHLRELLFVDQLAVVQHQRRPHAVAAENK 481
>ref|NP_001046174.1| Os02g0194000 [Oryza sativa Japonica Group]
gi|46389841|dbj|BAD15404.1| putative SWIRM
domain-containing protein [Oryza sativa Japonica Group]
gi|113535705|dbj|BAF08088.1| Os02g0194000 [Oryza sativa
Japonica Group]
Length = 302
Score = 75.1 bits (183), Expect = 2e-11
Identities = 42/107 (39%), Positives = 63/107 (58%)
Frame = +3
Query: 12 SAADGAKEEDSPAVDQQAYSEILSVAAAEAQAKLETEQKDVERYISDIVQVQMKEIQDKI 191
S+ + +KEE+S + + +++L A+A AQ +LE E+K +E+ +SDIV VQMKEIQDKI
Sbjct: 185 SSINISKEEESSCTNGLSANDLLKEASANAQVQLEKERKAIEQSLSDIVGVQMKEIQDKI 244
Query: 192 IHFXXXXXXXXXXXXXXRHMKDLLFEDQLTYLQHNTRPISKGAEGQN 332
F +K+LLF DQL +QH RP + E ++
Sbjct: 245 RRFEQKELLMEKERKQLHCLKELLFSDQLAVVQHQRRPPAVTTESKD 291
>gb|EAZ22070.1| hypothetical protein OsJ_05733 [Oryza sativa Japonica Group]
Length = 511
Score = 75.1 bits (183), Expect = 2e-11
Identities = 42/107 (39%), Positives = 63/107 (58%)
Frame = +3
Query: 12 SAADGAKEEDSPAVDQQAYSEILSVAAAEAQAKLETEQKDVERYISDIVQVQMKEIQDKI 191
S+ + +KEE+S + + +++L A+A AQ +LE E+K +E+ +SDIV VQMKEIQDKI
Sbjct: 394 SSINISKEEESSCTNGLSANDLLKEASANAQVQLEKERKAIEQSLSDIVGVQMKEIQDKI 453
Query: 192 IHFXXXXXXXXXXXXXXRHMKDLLFEDQLTYLQHNTRPISKGAEGQN 332
F +K+LLF DQL +QH RP + E ++
Sbjct: 454 RRFEQKELLMEKERKQLHCLKELLFSDQLAVVQHQRRPPAVTTESKD 500
>gb|EAY84848.1| hypothetical protein OsI_06214 [Oryza sativa Indica Group]
Length = 507
Score = 75.1 bits (183), Expect = 2e-11
Identities = 42/107 (39%), Positives = 63/107 (58%)
Frame = +3
Query: 12 SAADGAKEEDSPAVDQQAYSEILSVAAAEAQAKLETEQKDVERYISDIVQVQMKEIQDKI 191
S+ + +KEE+S + + +++L A+A AQ +LE E+K +E+ +SDIV VQMKEIQDKI
Sbjct: 390 SSINISKEEESSCTNGLSANDLLKEASANAQVQLEKERKAIEQSLSDIVGVQMKEIQDKI 449
Query: 192 IHFXXXXXXXXXXXXXXRHMKDLLFEDQLTYLQHNTRPISKGAEGQN 332
F +K+LLF DQL +QH RP + E ++
Sbjct: 450 RRFEQKELLMEKERKQLHCLKELLFSDQLAVVQHQRRPPAVTTESKD 496
>ref|XP_003571061.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Brachypodium
distachyon]
Length = 493
Score = 73.6 bits (179), Expect = 4e-11
Identities = 41/106 (38%), Positives = 61/106 (57%)
Frame = +3
Query: 12 SAADGAKEEDSPAVDQQAYSEILSVAAAEAQAKLETEQKDVERYISDIVQVQMKEIQDKI 191
S+ KEE+S + + +++L A+A A+ +LE E+KD+E+ +SDIV VQMKEIQ KI
Sbjct: 377 SSIGSPKEEESCYTNGFSANDLLKEASANARVQLEKERKDIEQSLSDIVDVQMKEIQAKI 436
Query: 192 IHFXXXXXXXXXXXXXXRHMKDLLFEDQLTYLQHNTRPISKGAEGQ 329
F +++ LLF DQL +QH RP + AE +
Sbjct: 437 CRFEQKELLMEKERQQLHYLQKLLFADQLAVVQHQCRPHAVTAENE 482
>ref|XP_006646993.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Oryza brachyantha]
Length = 301
Score = 72.8 bits (177), Expect = 8e-11
Identities = 39/92 (42%), Positives = 56/92 (60%)
Frame = +3
Query: 30 KEEDSPAVDQQAYSEILSVAAAEAQAKLETEQKDVERYISDIVQVQMKEIQDKIIHFXXX 209
KEE+S + + +++L A+A AQ +LE E+K +E+ +SDIV VQMKEIQDKI F
Sbjct: 190 KEEESSWANGLSTNDLLKEASANAQLQLEKERKAIEQSLSDIVGVQMKEIQDKIRRFEQK 249
Query: 210 XXXXXXXXXXXRHMKDLLFEDQLTYLQHNTRP 305
++++LLF DQL+ QH RP
Sbjct: 250 ELLMEKERKQLHYLRELLFSDQLSVAQHQRRP 281
>ref|NP_001141323.1| uncharacterized protein LOC100273414 [Zea mays]
gi|194703974|gb|ACF86071.1| unknown [Zea mays]
gi|195636100|gb|ACG37518.1| ATSWI3B [Zea mays]
gi|413926290|gb|AFW66222.1| ATSWI3B [Zea mays]
Length = 495
Score = 70.1 bits (170), Expect = 5e-10
Identities = 37/100 (37%), Positives = 58/100 (58%)
Frame = +3
Query: 3 KLHSAADGAKEEDSPAVDQQAYSEILSVAAAEAQAKLETEQKDVERYISDIVQVQMKEIQ 182
++ ++ + K+E+S + + + +L AAA A+A+LE E+ +E+ +S+IV VQMKEIQ
Sbjct: 375 EIETSINSIKQEESSHTNGLSANVLLKEAAANARAQLEKERNSIEQSLSNIVDVQMKEIQ 434
Query: 183 DKIIHFXXXXXXXXXXXXXXRHMKDLLFEDQLTYLQHNTR 302
DKI F ++DLLF DQL +QH R
Sbjct: 435 DKICRFEQKEMLMEKERQQLHFLRDLLFTDQLAVMQHQQR 474
>ref|XP_002451710.1| hypothetical protein SORBIDRAFT_04g006410 [Sorghum bicolor]
gi|241931541|gb|EES04686.1| hypothetical protein
SORBIDRAFT_04g006410 [Sorghum bicolor]
Length = 498
Score = 69.7 bits (169), Expect = 6e-10
Identities = 36/100 (36%), Positives = 58/100 (58%)
Frame = +3
Query: 3 KLHSAADGAKEEDSPAVDQQAYSEILSVAAAEAQAKLETEQKDVERYISDIVQVQMKEIQ 182
++ ++ + KEE+S + + +++L AAA A+A+LE E+ +E+ +S+IV VQM EIQ
Sbjct: 378 EIETSINSTKEEESSHTNGLSVNDLLKEAAANARAQLEKERNSIEQSLSNIVDVQMMEIQ 437
Query: 183 DKIIHFXXXXXXXXXXXXXXRHMKDLLFEDQLTYLQHNTR 302
DKI F ++D+LF DQL +QH R
Sbjct: 438 DKICRFEQKEMLMEKERQQLNCLRDILFTDQLAVMQHQQR 477
>ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vitis vinifera]
gi|297745602|emb|CBI40767.3| unnamed protein product
[Vitis vinifera]
Length = 492
Score = 67.8 bits (164), Expect = 2e-09
Identities = 43/96 (44%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +3
Query: 6 LHSAADGAKEEDSPAVDQQAY--SEILSVAAAEAQAKLETEQKDVERYISDIVQVQMKEI 179
L S A+GA+ +D P V+ S +L A +A++ LE E+ DVER IS I +VQMKEI
Sbjct: 377 LGSFANGARIQD-PNVESNGNTTSNVLEGAYVDAKSLLEREELDVERAISGITEVQMKEI 435
Query: 180 QDKIIHFXXXXXXXXXXXXXXRHMKDLLFEDQLTYL 287
+DKI+HF + MK+LLF DQLT L
Sbjct: 436 RDKIVHFEEFELHMEKEWQQLQQMKNLLFVDQLTLL 471
>emb|CAN64878.1| hypothetical protein VITISV_030794 [Vitis vinifera]
Length = 422
Score = 65.5 bits (158), Expect = 1e-08
Identities = 44/96 (45%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Frame = +3
Query: 6 LHSAADGAKEEDSPAVDQQA--YSEILSVAAAEAQAKLETEQKDVERYISDIVQVQMKEI 179
L S A+GA+ +D P V+ S L A +A++ LE E+ DVER IS I +VQMKEI
Sbjct: 307 LGSFANGARIQD-PNVESNGDTTSNALEGAYVDAKSLLEREELDVERAISGITEVQMKEI 365
Query: 180 QDKIIHFXXXXXXXXXXXXXXRHMKDLLFEDQLTYL 287
+DKI+HF + MK LLF DQLT L
Sbjct: 366 RDKIVHFEEFELHMEKEXQQLQQMKXLLFVDQLTLL 401
>ref|XP_006473852.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Citrus sinensis]
Length = 466
Score = 62.8 bits (151), Expect = 8e-08
Identities = 37/96 (38%), Positives = 52/96 (54%)
Frame = +3
Query: 30 KEEDSPAVDQQAYSEILSVAAAEAQAKLETEQKDVERYISDIVQVQMKEIQDKIIHFXXX 209
++E A + A L+ A+ +A + +E E+ DVE+ IS IV+VQMKEIQDKII F
Sbjct: 359 QQEAGVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESL 418
Query: 210 XXXXXXXXXXXRHMKDLLFEDQLTYLQHNTRPISKG 317
+K+LLF DQL+ L H + G
Sbjct: 419 DLQMEEEWKQLEQVKNLLFVDQLSVLFHKSNARKNG 454
>ref|XP_006435443.1| hypothetical protein CICLE_v10001069mg [Citrus clementina]
gi|557537565|gb|ESR48683.1| hypothetical protein
CICLE_v10001069mg [Citrus clementina]
Length = 466
Score = 62.8 bits (151), Expect = 8e-08
Identities = 37/96 (38%), Positives = 52/96 (54%)
Frame = +3
Query: 30 KEEDSPAVDQQAYSEILSVAAAEAQAKLETEQKDVERYISDIVQVQMKEIQDKIIHFXXX 209
++E A + A L+ A+ +A + +E E+ DVE+ IS IV+VQMKEIQDKII F
Sbjct: 359 QQEAEVASNGDATQNALARASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESL 418
Query: 210 XXXXXXXXXXXRHMKDLLFEDQLTYLQHNTRPISKG 317
+K+LLF DQL+ L H + G
Sbjct: 419 DLQMEEEWKQLEQVKNLLFVDQLSVLFHKSNARKNG 454
>ref|XP_006581127.1| PREDICTED: SWI/SNF complex subunit SWI3B-like isoform X2 [Glycine
max]
Length = 479
Score = 61.6 bits (148), Expect = 2e-07
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +3
Query: 99 AQAKLETEQKDVERYISDIVQVQMKEIQDKIIHFXXXXXXXXXXXXXXRHMKDLLFEDQL 278
A +LE E+ DVE+ IS+I++VQMK IQDK++ F MK++ F DQL
Sbjct: 393 ANIQLEKEELDVEKAISEIIEVQMKNIQDKLVQFEDLDLLMEKEGQQLEQMKNMFFLDQL 452
Query: 279 TYLQHNTRPISKG--AEGQNTKSNN 347
T L H + G EG N K+N+
Sbjct: 453 TLLFHKSSAPKTGECQEGNNVKTNH 477
>ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-like isoform X1 [Glycine
max]
Length = 491
Score = 61.6 bits (148), Expect = 2e-07
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +3
Query: 99 AQAKLETEQKDVERYISDIVQVQMKEIQDKIIHFXXXXXXXXXXXXXXRHMKDLLFEDQL 278
A +LE E+ DVE+ IS+I++VQMK IQDK++ F MK++ F DQL
Sbjct: 405 ANIQLEKEELDVEKAISEIIEVQMKNIQDKLVQFEDLDLLMEKEGQQLEQMKNMFFLDQL 464
Query: 279 TYLQHNTRPISKG--AEGQNTKSNN 347
T L H + G EG N K+N+
Sbjct: 465 TLLFHKSSAPKTGECQEGNNVKTNH 489
>gb|EOY15890.1| Switch subunit 3, putative isoform 1 [Theobroma cacao]
Length = 483
Score = 59.7 bits (143), Expect = 7e-07
Identities = 33/70 (47%), Positives = 41/70 (58%)
Frame = +3
Query: 78 LSVAAAEAQAKLETEQKDVERYISDIVQVQMKEIQDKIIHFXXXXXXXXXXXXXXRHMKD 257
L A A+ A LE E++D+ER I+ I +VQMKEIQDKI+HF MK+
Sbjct: 392 LERAYADVYALLEKEERDIERAITGITEVQMKEIQDKILHFEELDLQMEKELAQLEGMKN 451
Query: 258 LLFEDQLTYL 287
LLF DQL L
Sbjct: 452 LLFVDQLNLL 461
>ref|XP_006849963.1| hypothetical protein AMTR_s00022p00147330 [Amborella trichopoda]
gi|548853561|gb|ERN11544.1| hypothetical protein
AMTR_s00022p00147330 [Amborella trichopoda]
Length = 495
Score = 58.9 bits (141), Expect = 1e-06
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = +3
Query: 78 LSVAAAEAQAKLETEQKDVERYISDIVQVQMKEIQDKIIHFXXXXXXXXXXXXXXRHMKD 257
L AEA+AKL+ E++ VE+ I+ IV VQMKEI KI HF HM+D
Sbjct: 409 LESIVAEARAKLDEEEQSVEQSIASIVDVQMKEIHRKIKHFEELELQLERERAQVNHMED 468
Query: 258 LLFEDQLTYLQHN 296
L++ +QL++LQ +
Sbjct: 469 LVYVEQLSFLQRS 481
>ref|XP_004500828.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cicer arietinum]
Length = 511
Score = 57.8 bits (138), Expect = 3e-06
Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +3
Query: 99 AQAKLETEQKDVERYISDIVQVQMKEIQDKIIHFXXXXXXXXXXXXXXRHMKDLLFEDQL 278
A + E E+ DVE+ ISDI+ VQMK+IQDK+I+F +K+L F DQL
Sbjct: 427 ANIQCEKEESDVEKAISDIIAVQMKDIQDKVINFEDLDLLMEKERLQLEQVKNLFFLDQL 486
Query: 279 TYLQHNTRPISKGAEG---QNTKSN 344
L N K EG N K N
Sbjct: 487 NLLFRNKTSAPKSGEGPENNNVKRN 511