BLASTX nr result
ID: Zingiber24_contig00028365
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00028365
(756 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003565962.1| PREDICTED: pentatricopeptide repeat-containi... 251 1e-64
dbj|BAK03204.1| predicted protein [Hordeum vulgare subsp. vulgare] 249 7e-64
gb|EOY34160.1| Tetratricopeptide repeat-like superfamily protein... 247 3e-63
ref|XP_006279438.1| hypothetical protein CARUB_v10007904mg, part... 245 1e-62
ref|XP_004961338.1| PREDICTED: pentatricopeptide repeat-containi... 243 7e-62
gb|EXC35073.1| hypothetical protein L484_010855 [Morus notabilis] 241 2e-61
ref|NP_001056228.1| Os05g0548600 [Oryza sativa Japonica Group] g... 241 2e-61
gb|AFW80983.1| hypothetical protein ZEAMMB73_782047 [Zea mays] 241 2e-61
gb|EAY98910.1| hypothetical protein OsI_20865 [Oryza sativa Indi... 241 2e-61
ref|NP_172253.1| pentatricopeptide repeat-containing protein [Ar... 239 6e-61
ref|XP_004295952.1| PREDICTED: pentatricopeptide repeat-containi... 239 7e-61
ref|XP_006655549.1| PREDICTED: pentatricopeptide repeat-containi... 238 1e-60
ref|XP_002892416.1| pentatricopeptide repeat-containing protein ... 238 1e-60
ref|XP_002303899.2| pentatricopeptide repeat-containing family p... 238 2e-60
ref|XP_004505902.1| PREDICTED: pentatricopeptide repeat-containi... 238 2e-60
ref|XP_002440180.1| hypothetical protein SORBIDRAFT_09g027340 [S... 236 6e-60
ref|XP_006417772.1| hypothetical protein EUTSA_v10009298mg [Eutr... 236 8e-60
gb|EMJ09951.1| hypothetical protein PRUPE_ppa015993mg [Prunus pe... 236 8e-60
ref|XP_002531100.1| pentatricopeptide repeat-containing protein,... 235 1e-59
ref|XP_006488245.1| PREDICTED: pentatricopeptide repeat-containi... 234 2e-59
>ref|XP_003565962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Brachypodium distachyon]
Length = 431
Score = 251 bits (642), Expect = 1e-64
Identities = 131/249 (52%), Positives = 167/249 (67%)
Frame = -2
Query: 749 SLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLFDE 570
+ ++ L V N RL+ AR LL + AA G+R NAVSYNI+++G C +G AR++ DE
Sbjct: 126 TFHALLHCFVCNGRLDAARDLLPR-AAKLGVRPNAVSYNIILKGACERDGFVGARVVLDE 184
Query: 569 MLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCREGN 390
ML +G+RPTVVT+N L+G + + G+LG RL+EEMVRRGV PNA+T++LLM LC G
Sbjct: 185 MLGRGVRPTVVTFNTLVGAACQEGELGGAERLREEMVRRGVTPNAVTYSLLMRGLCDAGR 244
Query: 389 YAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIYGA 210
+ AKKMMFDMEYQGC+ VNYGVL+S L+ M++RKLKPD Y
Sbjct: 245 HDDAKKMMFDMEYQGCQTEAVNYGVLMSAYARQGNIDGVRGLLSNMRKRKLKPDDASYNV 304
Query: 209 LINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAMLAS 30
LI LC GR EA+ LVEMQV+ G P+AA YR++ADG C A DF + RV+ AMLAS
Sbjct: 305 LIKCLCDNGRVVEAHKALVEMQVKEGTVPSAATYRVLADGCCSAQDFGLGLRVLNAMLAS 364
Query: 29 GHCPREETF 3
GHCP TF
Sbjct: 365 GHCPLAHTF 373
>dbj|BAK03204.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 435
Score = 249 bits (636), Expect = 7e-64
Identities = 127/249 (51%), Positives = 170/249 (68%)
Frame = -2
Query: 749 SLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLFDE 570
+ ++ + LV N R++ AR +L + AA G+R NAVSYNI+++G C +GS+ AR++ DE
Sbjct: 128 TFHALIHCLVCNGRVDAARNMLPR-AAKLGVRPNAVSYNIILKGLCGRDGSAGARVVLDE 186
Query: 569 MLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCREGN 390
ML +G+RPTVVT+N L+G + + GD+G +LKEEMVRRGV PNA+T++LLM LC G
Sbjct: 187 MLGRGVRPTVVTFNTLVGAACQEGDVGAAEQLKEEMVRRGVSPNAVTYSLLMRGLCDAGR 246
Query: 389 YAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIYGA 210
AKK+MFDMEYQGC+ VNYGVL+S L++M++RKL PD Y
Sbjct: 247 QDDAKKLMFDMEYQGCQTEAVNYGVLMSAYARQGDVDSVRGLLSDMRKRKLGPDDASYNV 306
Query: 209 LINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAMLAS 30
LI LC +G+ EA+ LVEMQ++ G P+AA YR++ADG CRAGDF + RV AMLAS
Sbjct: 307 LIKCLCDSGKVEEAHKALVEMQLKDGTVPSAATYRVLADGCCRAGDFGLGLRVFNAMLAS 366
Query: 29 GHCPREETF 3
GH P TF
Sbjct: 367 GHRPLGHTF 375
>gb|EOY34160.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 951
Score = 247 bits (631), Expect = 3e-63
Identities = 126/250 (50%), Positives = 162/250 (64%)
Frame = -2
Query: 755 VQSLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLF 576
VQSLNS L ALV+N R A+ + +S G R N+ ++N++I+G E A LF
Sbjct: 642 VQSLNSVLNALVDNDRFFDAKVIFDKSPK-MGFRPNSTTFNVMIKGLLKREAFDEACCLF 700
Query: 575 DEMLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCRE 396
DEML++ + P+VVTYN IG K G++ L E+MV++G PNA+T+ALLM+ LC
Sbjct: 701 DEMLERNVEPSVVTYNSFIGFLCKKGEMENAEGLVEDMVKKGKYPNAVTYALLMEGLCSL 760
Query: 395 GNYAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIY 216
G Y AKK+MFDMEY+GCK ++N+GVL++ L EMK+R+ KPDV IY
Sbjct: 761 GKYKEAKKLMFDMEYKGCKTKVINFGVLMTYLGKRGEIEEAKSLLREMKKRRFKPDVVIY 820
Query: 215 GALINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAML 36
L+NYLC GR EAY VL+EMQV+ GCEPNAA YRMM DG C GD E A +V+ M
Sbjct: 821 NILVNYLCKEGRVGEAYKVLIEMQVK-GCEPNAATYRMMVDGFCMVGDLEGALKVLNVMF 879
Query: 35 ASGHCPREET 6
SGHCPR ET
Sbjct: 880 TSGHCPRLET 889
Score = 80.9 bits (198), Expect = 4e-13
Identities = 56/236 (23%), Positives = 101/236 (42%), Gaps = 35/236 (14%)
Frame = -2
Query: 755 VQSLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLF 576
V + NS + L + +E A L+ + G NAV+Y +L++G C+ A+ L
Sbjct: 712 VVTYNSFIGFLCKKGEMENAEGLV-EDMVKKGKYPNAVTYALLMEGLCSLGKYKEAKKLM 770
Query: 575 DEMLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCRE 396
+M KG + V+ + VL+ + K G++ L EM +R +P+ + + +L++ LC+E
Sbjct: 771 FDMEYKGCKTKVINFGVLMTYLGKRGEIEEAKSLLREMKKRRFKPDVVIYNILVNYLCKE 830
Query: 395 GNYAAAKKMMFDMEYQGCKAGLVNYGV--------------------------------- 315
G A K++ +M+ +GC+ Y +
Sbjct: 831 GRVGEAYKVLIEMQVKGCEPNAATYRMMVDGFCMVGDLEGALKVLNVMFTSGHCPRLETL 890
Query: 314 --LVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIYGALINYLCGAGRTAEAYAVLV 153
LV+ L EM++RK+ D+ +GAL+ CG T + L+
Sbjct: 891 CQLVTGLLKCGKIDGACFVLEEMEKRKMSFDLEAWGALVRDACGGDDTNDLQTQLI 946
>ref|XP_006279438.1| hypothetical protein CARUB_v10007904mg, partial [Capsella rubella]
gi|482548139|gb|EOA12336.1| hypothetical protein
CARUB_v10007904mg, partial [Capsella rubella]
Length = 551
Score = 245 bits (626), Expect = 1e-62
Identities = 128/251 (50%), Positives = 169/251 (67%)
Frame = -2
Query: 755 VQSLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLF 576
+QSLN+ + LV+N LE+A++ A LR N+VS+NILI+G +A +F
Sbjct: 152 IQSLNTLINVLVDNSELEKAKSFF-DGAKDLRLRPNSVSFNILIKGFLDKCDWEAACKVF 210
Query: 575 DEMLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCRE 396
DEML+ ++P+VVTYN LIG +N DLG L E+M ++ ++PNA+TF LLM LC +
Sbjct: 211 DEMLEMEVQPSVVTYNSLIGFLCRNNDLGKAKSLLEDMFQKRIRPNAVTFGLLMKGLCCK 270
Query: 395 GNYAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIY 216
G+Y+ AKK+MFDMEY+GCK GLVNYGVL+S L+EMK+R++KPDV IY
Sbjct: 271 GDYSEAKKLMFDMEYRGCKPGLVNYGVLMSDLGVRGKIDEAKLLLSEMKKRRIKPDVVIY 330
Query: 215 GALINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAML 36
L+N+LC GR EAY +L EMQ++ GC+PNAA YRMM DG CR GDF+ A V+ AML
Sbjct: 331 NILVNHLCTEGRATEAYRILTEMQMK-GCKPNAATYRMMVDGFCRIGDFDSALDVLNAML 389
Query: 35 ASGHCPREETF 3
AS H P TF
Sbjct: 390 ASRHFPTPATF 400
>ref|XP_004961338.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Setaria italica]
Length = 435
Score = 243 bits (619), Expect = 7e-62
Identities = 123/249 (49%), Positives = 164/249 (65%)
Frame = -2
Query: 749 SLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLFDE 570
+ ++ L +LV N R++ AR +L Q A G+R NAVSYNI+++G C +G + AR + +E
Sbjct: 128 TFHALLHSLVCNGRVDAARDMLPQ-APKLGVRTNAVSYNIILKGVCHRDGFAGARAVLEE 186
Query: 569 MLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCREGN 390
ML +G+RPTVVT+N L+G + + G+L T RL EM RRGV PNA+T+AL+M LC G
Sbjct: 187 MLARGVRPTVVTFNTLVGSACREGELATAERLVNEMARRGVTPNAVTYALVMQGLCDAGL 246
Query: 389 YAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIYGA 210
Y AKK+MFDMEY+ C+ NYGVL+S ++EM++RKL+PD Y
Sbjct: 247 YDDAKKLMFDMEYRDCQPEAANYGVLMSACALRGDADGVRGLISEMRKRKLRPDDASYNV 306
Query: 209 LINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAMLAS 30
LI LC AGR EA+ LVEMQ++ G P+AA YR++ DG C AGDFE+ RV AMLAS
Sbjct: 307 LIRCLCDAGRVGEAHRALVEMQLKDGAAPSAATYRVLLDGCCEAGDFELGLRVFNAMLAS 366
Query: 29 GHCPREETF 3
GH P TF
Sbjct: 367 GHYPLARTF 375
>gb|EXC35073.1| hypothetical protein L484_010855 [Morus notabilis]
Length = 461
Score = 241 bits (615), Expect = 2e-61
Identities = 121/251 (48%), Positives = 164/251 (65%)
Frame = -2
Query: 755 VQSLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLF 576
+QSLN+ L LV+ R +A + +S G R N++++NI+I+GC A +F
Sbjct: 153 LQSLNALLNVLVDGGRFSEANDVFYRSYK-MGFRPNSITFNIIIKGCLRKGDWEEASKVF 211
Query: 575 DEMLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCRE 396
DEML++ ++P+VVTYN LIG+ K G+L L E+M+ +G PNA+T+AL+M+ LC
Sbjct: 212 DEMLERSVQPSVVTYNSLIGYLCKKGELDKAKGLLEDMIEKGKCPNAVTYALMMEGLCSV 271
Query: 395 GNYAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIY 216
G Y AKK+MFDMEY+GCK LVN+G+L++ L EMKRR+ KPDV IY
Sbjct: 272 GKYKEAKKLMFDMEYRGCKPKLVNFGILMTDLGRRGNIEEAKLLLNEMKRRRFKPDVVIY 331
Query: 215 GALINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAML 36
LINYLC G+ A+ +L EMQ+ GGCEPNAA YR+M DG C+ GDFE +V+ AML
Sbjct: 332 NILINYLCREGKAVAAHKILTEMQI-GGCEPNAATYRVMVDGFCQVGDFERGLKVLNAML 390
Query: 35 ASGHCPREETF 3
S HCPR E+F
Sbjct: 391 TSRHCPRLESF 401
Score = 75.5 bits (184), Expect = 2e-11
Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 35/230 (15%)
Frame = -2
Query: 755 VQSLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLF 576
V + NS + L + L++A+ LL + G NAV+Y ++++G C+ A+ L
Sbjct: 223 VVTYNSLIGYLCKKGELDKAKGLL-EDMIEKGKCPNAVTYALMMEGLCSVGKYKEAKKLM 281
Query: 575 DEMLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCRE 396
+M +G +P +V + +L+ + G++ L EM RR +P+ + + +L++ LCRE
Sbjct: 282 FDMEYRGCKPKLVNFGILMTDLGRRGNIEEAKLLLNEMKRRRFKPDVVIYNILINYLCRE 341
Query: 395 GNYAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXL--------------- 261
G AA K++ +M+ GC+ Y V+V L
Sbjct: 342 GKAVAAHKILTEMQIGGCEPNAATYRVMVDGFCQVGDFERGLKVLNAMLTSRHCPRLESF 401
Query: 260 --------------------AEMKRRKLKPDVPIYGALINYLCGAGRTAE 171
EM +RK++ D+ + AL+ CG A+
Sbjct: 402 RCLIMGLVKCGNLEDACFVLEEMGKRKMQFDLEGWDALVVEACGRNSGAD 451
>ref|NP_001056228.1| Os05g0548600 [Oryza sativa Japonica Group]
gi|113579779|dbj|BAF18142.1| Os05g0548600 [Oryza sativa
Japonica Group] gi|222632454|gb|EEE64586.1| hypothetical
protein OsJ_19438 [Oryza sativa Japonica Group]
Length = 440
Score = 241 bits (615), Expect = 2e-61
Identities = 126/249 (50%), Positives = 164/249 (65%)
Frame = -2
Query: 749 SLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLFDE 570
+ +S L ALV N R + AR +L A G+R NAVSYNI+++G C +G AR + DE
Sbjct: 131 TFHSLLNALVSNGRTDAARDMLPL-APKLGVRLNAVSYNIILKGACLRDGFMGARGVLDE 189
Query: 569 MLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCREGN 390
ML +G+RPTVVT+N L+G + + G+LG RL +EM RRGV PNA T+ALLM LC
Sbjct: 190 MLSRGVRPTVVTFNTLVGSACREGELGAAERLIDEMARRGVAPNAATYALLMRGLCDADR 249
Query: 389 YAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIYGA 210
+A A+K+MFDMEY+GC+A +VNYGVL+S L+ M++RKLKPD Y
Sbjct: 250 HADAEKLMFDMEYRGCQADVVNYGVLMSSRARHGDADGVRELLSAMRKRKLKPDDASYNI 309
Query: 209 LINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAMLAS 30
LI LC AGR EA+ L+EMQ+ G P AA YR++ DG CRA DF++ RV AM+AS
Sbjct: 310 LIRCLCDAGRADEAHRALLEMQLR-GTVPGAATYRVLVDGCCRARDFDLGLRVFNAMMAS 368
Query: 29 GHCPREETF 3
GHCP+ TF
Sbjct: 369 GHCPQARTF 377
>gb|AFW80983.1| hypothetical protein ZEAMMB73_782047 [Zea mays]
Length = 436
Score = 241 bits (614), Expect = 2e-61
Identities = 120/249 (48%), Positives = 165/249 (66%)
Frame = -2
Query: 749 SLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLFDE 570
+ ++ L +LV N R++ AR +L + A G+R NAVSYNI+++G C +G S AR++ DE
Sbjct: 128 TFHALLHSLVCNGRVDAARDMLPE-APKLGVRTNAVSYNIILKGVCHRDGFSGARVVLDE 186
Query: 569 MLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCREGN 390
ML +G+RPTVVT+N L+G + + G+L RL +EM RRGV PNA+T+ALLM LC G
Sbjct: 187 MLARGVRPTVVTFNTLVGSACREGELAAAERLVDEMTRRGVAPNAVTYALLMQGLCDAGR 246
Query: 389 YAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIYGA 210
Y AKK++FDMEY+ C+ + NYGVL+S +++M++RK+KPD Y
Sbjct: 247 YDDAKKLLFDMEYRDCQPDVANYGVLMSACAACGDADGVKGLISDMRKRKMKPDDASYNV 306
Query: 209 LINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAMLAS 30
LI LC AGR EA+ LVEMQ++ G P+AA YR++ DG C A DF++ RV AMLAS
Sbjct: 307 LIRCLCDAGRVDEAHRALVEMQLKDGTAPSAATYRVLLDGCCEARDFDLGLRVFNAMLAS 366
Query: 29 GHCPREETF 3
GHC TF
Sbjct: 367 GHCSLPPTF 375
>gb|EAY98910.1| hypothetical protein OsI_20865 [Oryza sativa Indica Group]
Length = 440
Score = 241 bits (614), Expect = 2e-61
Identities = 126/249 (50%), Positives = 164/249 (65%)
Frame = -2
Query: 749 SLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLFDE 570
+ +S L ALV N R + AR +L A G+R NAVSYNI+++G C +G AR + DE
Sbjct: 131 TFHSLLNALVSNGRTDAARDMLPL-APKLGVRLNAVSYNIILKGVCLRDGFMGARGVLDE 189
Query: 569 MLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCREGN 390
ML +G+RPTVVT+N L+G + + G+LG RL +EM RRGV PNA T+ALLM LC
Sbjct: 190 MLSRGVRPTVVTFNTLVGSACREGELGAAERLIDEMARRGVAPNAATYALLMRGLCDADR 249
Query: 389 YAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIYGA 210
+A A+K+MFDMEY+GC+A +VNYGVL+S L+ M++RKLKPD Y
Sbjct: 250 HADAEKLMFDMEYRGCQADVVNYGVLMSSRARRGDADGVRELLSAMRKRKLKPDDASYNI 309
Query: 209 LINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAMLAS 30
LI LC AGR EA+ L+EMQ+ G P AA YR++ DG CRA DF++ RV AM+AS
Sbjct: 310 LIRCLCDAGRADEAHRALLEMQLR-GTVPGAATYRVLVDGCCRARDFDLGLRVFNAMMAS 368
Query: 29 GHCPREETF 3
GHCP+ TF
Sbjct: 369 GHCPQARTF 377
>ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g07740, mitochondrial; Flags: Precursor
gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR
repeats PF|01535 [Arabidopsis thaliana]
gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis
thaliana] gi|31376389|gb|AAP49521.1| At1g07730
[Arabidopsis thaliana] gi|51970836|dbj|BAD44110.1|
hypothetical protein [Arabidopsis thaliana]
gi|332190050|gb|AEE28171.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 239 bits (611), Expect = 6e-61
Identities = 125/251 (49%), Positives = 165/251 (65%)
Frame = -2
Query: 755 VQSLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLF 576
+QSLN+ + LV+N LE+A++ A LR N+VS+NILI+G +A +F
Sbjct: 151 IQSLNTLINVLVDNGELEKAKSFF-DGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVF 209
Query: 575 DEMLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCRE 396
DEML+ ++P+VVTYN LIG +N D+G L E+M+++ ++PNA+TF LLM LC +
Sbjct: 210 DEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCK 269
Query: 395 GNYAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIY 216
G Y AKK+MFDMEY+GCK GLVNYG+L+S L EMK+R++KPDV IY
Sbjct: 270 GEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIY 329
Query: 215 GALINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAML 36
L+N+LC R EAY VL EMQ++ GC+PNAA YRMM DG CR DF+ V+ AML
Sbjct: 330 NILVNHLCTECRVPEAYRVLTEMQMK-GCKPNAATYRMMIDGFCRIEDFDSGLNVLNAML 388
Query: 35 ASGHCPREETF 3
AS HCP TF
Sbjct: 389 ASRHCPTPATF 399
>ref|XP_004295952.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 468
Score = 239 bits (610), Expect = 7e-61
Identities = 127/251 (50%), Positives = 161/251 (64%)
Frame = -2
Query: 755 VQSLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLF 576
+QS NS L LV+ R A + + + G R N++SYNI+I+G AR +F
Sbjct: 160 LQSFNSLLNVLVDTDRFSDANEIFGR-CSQMGFRPNSISYNIMIKGWLKKGEVEEARKVF 218
Query: 575 DEMLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCRE 396
DEML++ ++P+VVTYN LIG ++ G+L L E+M ++G PNA+T+ALLM+ LC
Sbjct: 219 DEMLERKVQPSVVTYNSLIGFFSRKGELEEATYLLEDMRQKGKYPNAVTYALLMEGLCMV 278
Query: 395 GNYAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIY 216
G Y AKKMMFDM Y+GCK LVNYGVLVS L EMK+++ +PDV IY
Sbjct: 279 GKYEEAKKMMFDMAYRGCKPRLVNYGVLVSDLGRRGKIEEAKALLQEMKKKRFRPDVVIY 338
Query: 215 GALINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAML 36
LIN+LC GR EAY VL+EMQV GG EPNAA YRMM DG C+ DFE +V+ AML
Sbjct: 339 NILINFLCKEGRATEAYKVLIEMQV-GGFEPNAATYRMMVDGFCQTEDFEGGLKVLIAML 397
Query: 35 ASGHCPREETF 3
S HCPR ETF
Sbjct: 398 TSKHCPRLETF 408
>ref|XP_006655549.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Oryza brachyantha]
Length = 290
Score = 238 bits (608), Expect = 1e-60
Identities = 119/224 (53%), Positives = 152/224 (67%)
Frame = -2
Query: 674 AATFGLRANAVSYNILIQGCCAAEGSSSARLLFDEMLQKGIRPTVVTYNVLIGHSAKNGD 495
A G+R NAVSYNI+++G C +G AR + DEML +G+RPTVVT+N L+G + + G+
Sbjct: 5 APKLGVRLNAVSYNIILKGACLRDGFMGARAMLDEMLGRGVRPTVVTFNTLVGSACREGE 64
Query: 494 LGTGARLKEEMVRRGVQPNAITFALLMDALCREGNYAAAKKMMFDMEYQGCKAGLVNYGV 315
LG RL +EMVRRGV PNA T+ALLM LC Y AKK+MFDMEY+GC+A +VNYGV
Sbjct: 65 LGAAERLVDEMVRRGVTPNAATYALLMRGLCDSDRYDDAKKLMFDMEYRGCQAEVVNYGV 124
Query: 314 LVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIYGALINYLCGAGRTAEAYAVLVEMQVEG 135
L++ L+ M++RKLKPD Y LI LC AGR EA+ L+EMQ++
Sbjct: 125 LMASCARRGDADGVRELLSAMRKRKLKPDDASYNVLIKCLCDAGRVGEAHRALLEMQLK- 183
Query: 134 GCEPNAAAYRMMADGACRAGDFEMASRVVTAMLASGHCPREETF 3
G P AA YR++ DG CRA DFE+ RV+ AMLASGHCP+ TF
Sbjct: 184 GTVPGAATYRVLVDGCCRARDFELGLRVLNAMLASGHCPQARTF 227
>ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338258|gb|EFH68675.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 459
Score = 238 bits (608), Expect = 1e-60
Identities = 124/251 (49%), Positives = 163/251 (64%)
Frame = -2
Query: 755 VQSLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLF 576
+QSLN+ + LV+N LE+A++ A LR N+VS+NILI+G +A +F
Sbjct: 151 IQSLNTLINVLVDNGELEKAKSFF-DGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVF 209
Query: 575 DEMLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCRE 396
DEML+ ++P+VVTYN LIG +N D+G L E+M+++ ++PNA+TF LLM LC
Sbjct: 210 DEMLEMEVQPSVVTYNSLIGFLCRNNDMGKATSLLEDMIKKRIRPNAVTFGLLMKGLCCN 269
Query: 395 GNYAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIY 216
G Y AKK+MFDMEY+GCK GLVNYGVL+S L EMK+R++KPD IY
Sbjct: 270 GEYNEAKKLMFDMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKILLGEMKKRRIKPDFVIY 329
Query: 215 GALINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAML 36
L+N+LC GR EAY L EMQ++ GC+PNAA YRM+ DG CR GDF+ V+ AML
Sbjct: 330 NILVNHLCTEGRVPEAYRTLTEMQMK-GCKPNAATYRMIVDGFCRIGDFDSGLNVLNAML 388
Query: 35 ASGHCPREETF 3
AS H P TF
Sbjct: 389 ASRHSPTPATF 399
>ref|XP_002303899.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550343608|gb|EEE78878.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 463
Score = 238 bits (607), Expect = 2e-60
Identities = 128/250 (51%), Positives = 161/250 (64%)
Frame = -2
Query: 752 QSLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLFD 573
QSLNS L LV+N +A L G R N+V++N++I+G A +FD
Sbjct: 152 QSLNSLLNVLVDNGWFLEANELF-DKGYEMGFRLNSVAFNVMIKGWLKKGEWEQASKVFD 210
Query: 572 EMLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCREG 393
EML++ + P+VVTYN LIG+ +NG+L L E+M+++G +PNAITFALLM+ C G
Sbjct: 211 EMLERKVEPSVVTYNSLIGYLCRNGELDKAKGLLEDMIKKGKRPNAITFALLMEGSCLIG 270
Query: 392 NYAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIYG 213
+ AKKMMFDMEY+GCK +VN+GVL+S L EMK+R +KPDV Y
Sbjct: 271 EHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKIDEAKSVLHEMKKRHMKPDVVTYN 330
Query: 212 ALINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAMLA 33
LINYLC GR A+AY VL EMQV GGCE NAA YRM+ DG CR GDFE +V+ AML
Sbjct: 331 ILINYLCKEGRAADAYEVLFEMQV-GGCEANAATYRMLVDGFCRVGDFEGGLKVLNAMLT 389
Query: 32 SGHCPREETF 3
SGH PR ETF
Sbjct: 390 SGHFPRVETF 399
>ref|XP_004505902.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cicer arietinum]
Length = 452
Score = 238 bits (607), Expect = 2e-60
Identities = 124/251 (49%), Positives = 163/251 (64%)
Frame = -2
Query: 755 VQSLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLF 576
+QSLN+ L LV++ +A A+S G R N V++NI+I+G A +F
Sbjct: 142 LQSLNALLNLLVDHRMFSEANDAFARSYE-MGFRPNTVTFNIMIKGWLAKGEWGRVCEVF 200
Query: 575 DEMLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCRE 396
DEMLQK ++P+VVTYN LIG ++ GDL L ++M +G + N +T+ALLM+ LC E
Sbjct: 201 DEMLQKRVQPSVVTYNSLIGFLSRKGDLDKAMTLLDDMKHKGKRANEVTYALLMEGLCSE 260
Query: 395 GNYAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIY 216
G Y AKK+MFDM Y+GCK LVN+ VL++ L EMK+R+LKPDV Y
Sbjct: 261 GKYEEAKKLMFDMAYRGCKPKLVNFSVLMNDLGKRGKIDEAMVLLREMKKRRLKPDVVSY 320
Query: 215 GALINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAML 36
L+NYLC G+T +AY +L+EMQ+ GGCEPNAA YRMM DG CR+GDFE V+ AML
Sbjct: 321 NVLVNYLCKEGKTVDAYKMLMEMQI-GGCEPNAATYRMMLDGLCRSGDFEQGLNVLNAML 379
Query: 35 ASGHCPREETF 3
AS HCPR +TF
Sbjct: 380 ASRHCPRSDTF 390
>ref|XP_002440180.1| hypothetical protein SORBIDRAFT_09g027340 [Sorghum bicolor]
gi|241945465|gb|EES18610.1| hypothetical protein
SORBIDRAFT_09g027340 [Sorghum bicolor]
Length = 437
Score = 236 bits (602), Expect = 6e-60
Identities = 118/249 (47%), Positives = 164/249 (65%)
Frame = -2
Query: 749 SLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLFDE 570
+ ++ L +LV N R++ AR +L + A G+R NAVSYNI+++G C +G S AR++ DE
Sbjct: 128 TFHALLHSLVCNGRVDAARDMLPE-APKLGVRTNAVSYNIILKGVCHRDGFSGARVVLDE 186
Query: 569 MLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCREGN 390
ML +G+RPTVVT+N L+G + + G+L +L +EM RR V PNA+T+ALLM LC G
Sbjct: 187 MLARGLRPTVVTFNTLVGSACREGELAAAEQLMDEMARRSVPPNAVTYALLMQGLCDAGR 246
Query: 389 YAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIYGA 210
Y AKK++FDMEY+ C+ + NYGVL+S +++M++RKL PD Y
Sbjct: 247 YDDAKKLLFDMEYRDCQPDVTNYGVLMSACAACGDAGGIRGLISDMRKRKLTPDDASYNV 306
Query: 209 LINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAMLAS 30
LI LC AG+ EA+ LVEMQ++ G P+AA YR++ DG C A DF++ RV AMLAS
Sbjct: 307 LIKCLCDAGKVDEAHRALVEMQLKDGTVPSAATYRVLLDGCCEARDFDLGLRVFNAMLAS 366
Query: 29 GHCPREETF 3
GHCP TF
Sbjct: 367 GHCPLALTF 375
>ref|XP_006417772.1| hypothetical protein EUTSA_v10009298mg [Eutrema salsugineum]
gi|557095543|gb|ESQ36125.1| hypothetical protein
EUTSA_v10009298mg [Eutrema salsugineum]
Length = 460
Score = 236 bits (601), Expect = 8e-60
Identities = 122/251 (48%), Positives = 163/251 (64%)
Frame = -2
Query: 755 VQSLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLF 576
+QSLN+ + LV++ LE+A++ A LR N+VS+N+LI+G +A +F
Sbjct: 152 IQSLNTLINVLVDHSELEKAKSFF-DGAKDMRLRPNSVSFNVLIKGFLDKCDWEAACKVF 210
Query: 575 DEMLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCRE 396
DEML+ ++PTVVTYN L+G +N DL L E+M+++ ++PN +TF LLM LC +
Sbjct: 211 DEMLEMEVQPTVVTYNSLVGFLCRNNDLAKAKSLLEDMIQKRIRPNPVTFGLLMKGLCCK 270
Query: 395 GNYAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIY 216
G Y AKK+MFDMEY+GCK GLVNYGVL+S L EMK+R++KPDV IY
Sbjct: 271 GEYNEAKKLMFDMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKLLLGEMKKRRIKPDVVIY 330
Query: 215 GALINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAML 36
L+N+LC GR EAY +L EMQ++ GC+PNAA YRMM DG CR GD + V+ AML
Sbjct: 331 NILVNHLCTEGRAPEAYRMLTEMQMK-GCKPNAATYRMMVDGFCRIGDLDSGLNVLNAML 389
Query: 35 ASGHCPREETF 3
AS H P TF
Sbjct: 390 ASRHSPTPATF 400
>gb|EMJ09951.1| hypothetical protein PRUPE_ppa015993mg [Prunus persica]
Length = 714
Score = 236 bits (601), Expect = 8e-60
Identities = 124/251 (49%), Positives = 163/251 (64%)
Frame = -2
Query: 755 VQSLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLF 576
+Q+ N+ L LV++ R +A + + + GLR N++SYNI+++G A +F
Sbjct: 159 LQAFNALLNVLVDSGRFVEADEIFGR-CSKMGLRPNSISYNIMMKGWLQKGDGEEACKVF 217
Query: 575 DEMLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCRE 396
DEML+K ++P+VVTYN LIG + G+L L E+M ++G PNA+T+ALLM+ C
Sbjct: 218 DEMLEKKVQPSVVTYNSLIGFFGRKGELEKANGLLEDMKQKGKYPNAVTYALLMEGFCML 277
Query: 395 GNYAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIY 216
G + AKKMMFDMEY+GCK L+NYGVL+S L EMK+R+ KPDV +Y
Sbjct: 278 GKHEEAKKMMFDMEYRGCKPRLLNYGVLMSDLGRRGKIDEAKSLLQEMKKRRFKPDVVLY 337
Query: 215 GALINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAML 36
LIN+LC GR AEAY VL+EMQV GGC PNAA YRMM DG C+ DFE +V+ AML
Sbjct: 338 NILINFLCKEGRAAEAYKVLIEMQV-GGCVPNAATYRMMVDGFCQIEDFEGGLKVLIAML 396
Query: 35 ASGHCPREETF 3
S HCPR ETF
Sbjct: 397 TSRHCPRLETF 407
>ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529296|gb|EEF31265.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 483
Score = 235 bits (600), Expect = 1e-59
Identities = 123/251 (49%), Positives = 166/251 (66%)
Frame = -2
Query: 755 VQSLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLF 576
+QS N+ L LV+N RL A+ L +S+ G R N+V +NILI+G A +F
Sbjct: 150 LQSFNALLNVLVDNDRLFDAKQLFDRSSE-MGFRLNSVPFNILIKGWLKKGEWYQAGKVF 208
Query: 575 DEMLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCRE 396
DEML++ + P+VVTYN LIG+ +NG+LG L ++M+++G +PNA+T+ALLM+ LC
Sbjct: 209 DEMLERKVEPSVVTYNSLIGYLCRNGELGKAKGLFKDMIKKGKRPNAVTYALLMEGLCSM 268
Query: 395 GNYAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIY 216
G Y AKKM+FDMEY+GCK +N+GVL++ L EMK+R+ +PDV IY
Sbjct: 269 GEYKEAKKMLFDMEYRGCKPKNLNFGVLMNDLGKKGKIEEAKLLLLEMKKRRFRPDVVIY 328
Query: 215 GALINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAML 36
LIN+LC G+ AEAY L EMQ+ GGCE NAA YRM+ADG C+ G+FE +V+ AML
Sbjct: 329 NILINHLCKEGKVAEAYKTLFEMQI-GGCEANAATYRMLADGFCQVGEFEEGLKVLNAML 387
Query: 35 ASGHCPREETF 3
S H PR ETF
Sbjct: 388 VSRHAPRIETF 398
>ref|XP_006488245.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Citrus sinensis]
Length = 477
Score = 234 bits (597), Expect = 2e-59
Identities = 123/251 (49%), Positives = 161/251 (64%)
Frame = -2
Query: 755 VQSLNSALAALVENCRLEQARALLAQSAATFGLRANAVSYNILIQGCCAAEGSSSARLLF 576
+QS NS L LV+N R++ A+ + A G R N +S+N++I+G A +F
Sbjct: 169 LQSFNSLLDILVDNDRVDDAKRMF-DDAYKMGFRPNLISFNVMIKGRLKKGEWEEASRVF 227
Query: 575 DEMLQKGIRPTVVTYNVLIGHSAKNGDLGTGARLKEEMVRRGVQPNAITFALLMDALCRE 396
DEML++ + PTVVTYN L+G + G++ L E+M+++G PNA+T+ALLM+ LC +
Sbjct: 228 DEMLEREVPPTVVTYNSLVGFLCRKGEMEKAKGLFEDMIKKGTYPNAVTYALLMEGLCFK 287
Query: 395 GNYAAAKKMMFDMEYQGCKAGLVNYGVLVSXXXXXXXXXXXXXXLAEMKRRKLKPDVPIY 216
G Y AKKMMFDM Y+GCK LVN+GVL+S L+EMK+R+ KPDV Y
Sbjct: 288 GEYNEAKKMMFDMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTY 347
Query: 215 GALINYLCGAGRTAEAYAVLVEMQVEGGCEPNAAAYRMMADGACRAGDFEMASRVVTAML 36
LINYLC R AEAY VL EMQ+ GGC+PNAA YR M DG R DFE + +V+ AML
Sbjct: 348 NILINYLCKEDRAAEAYKVLTEMQI-GGCKPNAATYRTMVDGFLRVEDFEGSLKVLNAML 406
Query: 35 ASGHCPREETF 3
S HCPR ETF
Sbjct: 407 TSRHCPRLETF 417