BLASTX nr result

ID: Zingiber24_contig00028266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00028266
         (232 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326260.1| predicted protein [Populus trichocarpa]            62   1e-07
ref|XP_006381286.1| hypothetical protein POPTR_0006s11410g [Popu...    62   1e-07
ref|XP_002519976.1| GTP binding protein, putative [Ricinus commu...    58   1e-06
gb|EMT17787.1| hypothetical protein F775_12401 [Aegilops tauschii]     57   3e-06
gb|EXC35208.1| Protein LURP-one-related 8 [Morus notabilis]            55   7e-06
emb|CBI31137.3| unnamed protein product [Vitis vinifera]               55   7e-06
ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis...    55   7e-06

>ref|XP_002326260.1| predicted protein [Populus trichocarpa]
          Length = 211

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
 Frame = -3

Query: 230 AGKPLLTVRRKKLSLGEKWKIYDGEGADDPVYSVKKRYA---KAALAHVAACXXXXXXXX 60
           AGKPLLT+RRK+LSLG+ W +YDGE A +P +SVKK  +   K  LAHV+          
Sbjct: 86  AGKPLLTMRRKRLSLGDSWLVYDGETAINPEFSVKKHVSILNKKCLAHVSQA--AGSNKN 143

Query: 59  XXXXXXXXXSNRSCTMYDE 3
                    + R C +YDE
Sbjct: 144 VMYEIEGSYTQRCCAVYDE 162


>ref|XP_006381286.1| hypothetical protein POPTR_0006s11410g [Populus trichocarpa]
           gi|118486089|gb|ABK94888.1| unknown [Populus
           trichocarpa] gi|550335987|gb|ERP59083.1| hypothetical
           protein POPTR_0006s11410g [Populus trichocarpa]
          Length = 218

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
 Frame = -3

Query: 230 AGKPLLTVRRKKLSLGEKWKIYDGEGADDPVYSVKKRYA---KAALAHVAACXXXXXXXX 60
           AGKPLLT+RRK+LSLG+ W +YDGE A +P +SVKK  +   K  LAHV+          
Sbjct: 86  AGKPLLTMRRKRLSLGDSWLVYDGETAINPEFSVKKHVSILNKKCLAHVSQA--AGSNKN 143

Query: 59  XXXXXXXXXSNRSCTMYDE 3
                    + R C +YDE
Sbjct: 144 VMYEIEGSYTQRCCAVYDE 162


>ref|XP_002519976.1| GTP binding protein, putative [Ricinus communis]
           gi|223540740|gb|EEF42300.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 215

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
 Frame = -3

Query: 227 GKPLLTVRRKKLSLGEKWKIYDGEGADDPVYSVKKRYA---KAALAHV---AACXXXXXX 66
           GKPLLT+RRK+LSLG+ W +YDGE A +P++SV+K        +LAHV   ++       
Sbjct: 79  GKPLLTIRRKRLSLGDNWLVYDGETAVNPLFSVRKHVKILNTKSLAHVSGNSSSGSTSNS 138

Query: 65  XXXXXXXXXXXSNRSCTMYDE 3
                      S RSC +YD+
Sbjct: 139 KNIVYEIEGSYSQRSCAVYDD 159


>gb|EMT17787.1| hypothetical protein F775_12401 [Aegilops tauschii]
          Length = 201

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
 Frame = -3

Query: 230 AGKPLLTVRRKKLSL-GEKWKIYDGEGADDPVYSVKKRYAKAALAHVAACXXXXXXXXXX 54
           AG+P  TVRRK+ SL GE+W ++ GE    PVY+V++      LAHV AC          
Sbjct: 69  AGRPPFTVRRKRFSLQGEQWLVFSGEETRRPVYTVRRSGRGKTLAHVTACAGAGAGPSYD 128

Query: 53  XXXXXXXSNRSCTMYD 6
                  + RSC +YD
Sbjct: 129 YEVEGSYARRSCVVYD 144


>gb|EXC35208.1| Protein LURP-one-related 8 [Morus notabilis]
          Length = 221

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 3/51 (5%)
 Frame = -3

Query: 230 AGKPLLTVRRKKLSLGEKWKIYDGEGADDPVYSVKKR---YAKAALAHVAA 87
           +GKPLLT+RRK+LSLG+ W ++DGE A +P +SV+K         LAHV++
Sbjct: 80  SGKPLLTIRRKRLSLGDNWLVFDGETASNPRFSVRKHVNLLNARCLAHVSS 130


>emb|CBI31137.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 22/36 (61%), Positives = 31/36 (86%)
 Frame = -3

Query: 230 AGKPLLTVRRKKLSLGEKWKIYDGEGADDPVYSVKK 123
           +GKPLLT+RRK+LSLG+ W +YDGE A++P + V+K
Sbjct: 75  SGKPLLTIRRKRLSLGDNWMVYDGETAENPRFQVRK 110


>ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera]
           gi|147770903|emb|CAN65231.1| hypothetical protein
           VITISV_007600 [Vitis vinifera]
           gi|239056173|emb|CAQ58606.1| unknown gene [Vitis
           vinifera] gi|239056193|emb|CAQ58630.1| Unknown gene
           [Vitis vinifera]
          Length = 216

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 22/36 (61%), Positives = 31/36 (86%)
 Frame = -3

Query: 230 AGKPLLTVRRKKLSLGEKWKIYDGEGADDPVYSVKK 123
           +GKPLLT+RRK+LSLG+ W +YDGE A++P + V+K
Sbjct: 75  SGKPLLTIRRKRLSLGDNWMVYDGETAENPRFQVRK 110


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