BLASTX nr result

ID: Zingiber24_contig00028240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00028240
         (421 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006492849.1| PREDICTED: YTH domain-containing protein 1-l...    57   2e-06
ref|XP_006492848.1| PREDICTED: YTH domain-containing protein 1-l...    57   2e-06
ref|XP_006429894.1| hypothetical protein CICLE_v10012160mg [Citr...    57   2e-06

>ref|XP_006492849.1| PREDICTED: YTH domain-containing protein 1-like isoform X2 [Citrus
           sinensis]
          Length = 304

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
 Frame = -3

Query: 419 EHHLGKGRLRNM-SISSRGQ-VGSSKHRWRSTGTDASSNSSTAGEIKPDNSIAGGRTRAA 246
           EHHLGKGRLR+M S+ SR   +GSS    +ST T A++ +  A    P  +      + +
Sbjct: 198 EHHLGKGRLRSMNSVRSRSSNLGSSASSNKSTATTAAATNKLAISSSPSTTTL----QES 253

Query: 245 KMEQEQAE--------MTCNRRKKTGTVRARSISSLLDDYDHHPTLS 129
           KM+QE           M+  +R K G V+ARSISSLL   D++  ++
Sbjct: 254 KMKQELVSDDDEKPLMMSAKKRVKLGMVKARSISSLLGQKDNNDIIA 300


>ref|XP_006492848.1| PREDICTED: YTH domain-containing protein 1-like isoform X1 [Citrus
           sinensis]
          Length = 339

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
 Frame = -3

Query: 419 EHHLGKGRLRNM-SISSRGQ-VGSSKHRWRSTGTDASSNSSTAGEIKPDNSIAGGRTRAA 246
           EHHLGKGRLR+M S+ SR   +GSS    +ST T A++ +  A    P  +      + +
Sbjct: 233 EHHLGKGRLRSMNSVRSRSSNLGSSASSNKSTATTAAATNKLAISSSPSTTTL----QES 288

Query: 245 KMEQEQAE--------MTCNRRKKTGTVRARSISSLLDDYDHHPTLS 129
           KM+QE           M+  +R K G V+ARSISSLL   D++  ++
Sbjct: 289 KMKQELVSDDDEKPLMMSAKKRVKLGMVKARSISSLLGQKDNNDIIA 335


>ref|XP_006429894.1| hypothetical protein CICLE_v10012160mg [Citrus clementina]
           gi|557531951|gb|ESR43134.1| hypothetical protein
           CICLE_v10012160mg [Citrus clementina]
          Length = 333

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
 Frame = -3

Query: 419 EHHLGKGRLRNM-SISSRGQ-VGSSKHRWRSTGTDASSNSSTAGEIKPDNSIAGGRTRAA 246
           EHHLGKGRLR+M S+ SR   +GSS    +ST T A++ +  A    P  +      + +
Sbjct: 227 EHHLGKGRLRSMNSVRSRSSNLGSSASSNKSTATTAAATNKLAISSSPSTTTL----QES 282

Query: 245 KMEQEQAE--------MTCNRRKKTGTVRARSISSLLDDYDHHPTLS 129
           KM+QE           M+  +R K G V+ARSISSLL   D++  ++
Sbjct: 283 KMKQELVSDDDEKPLMMSAKKRVKLGMVKARSISSLLGQKDNNDIIA 329


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