BLASTX nr result

ID: Zingiber24_contig00028174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00028174
         (278 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW76603.1| putative RING zinc finger domain superfamily prot...    65   9e-09
gb|AFV13468.1| ring-H2 zinc finger protein [Coix lacryma-jobi]         59   7e-07
ref|XP_003564161.1| PREDICTED: RING-H2 finger protein ATL3-like ...    56   6e-06
dbj|BAD35269.1| putative Avr9/Cf-9 rapidly elicited protein [Ory...    55   7e-06
ref|NP_001057038.2| Os06g0192800 [Oryza sativa Japonica Group] g...    55   7e-06
gb|EAZ36114.1| hypothetical protein OsJ_20425 [Oryza sativa Japo...    55   7e-06
dbj|BAG91736.1| unnamed protein product [Oryza sativa Japonica G...    55   7e-06
ref|XP_004964598.1| PREDICTED: E3 ubiquitin-protein ligase EL5-l...    55   1e-05

>gb|AFW76603.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 331

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 5/94 (5%)
 Frame = -3

Query: 273 DLAIEIPRRELEGFSSPV--SPLPTSR--NADEETRTPGSGRLRAVRRRLSMGKRTPTPG 106
           +L I+IP R +   ++P   SPLP SR   + +ETR+P S RLR++RR LS GK+     
Sbjct: 242 NLVIDIPTRPVALTTTPPFNSPLPASRVPGSADETRSPVSARLRSLRRLLSRGKQAVV-- 299

Query: 105 SGSACSPMG-GDLEQGFGGFYGEGSAPPATPPAN 7
            G++ SP G GD+EQG  G   E + PP TPPA+
Sbjct: 300 -GTSYSPRGAGDVEQGLAG--AEAARPPKTPPAS 330


>gb|AFV13468.1| ring-H2 zinc finger protein [Coix lacryma-jobi]
          Length = 308

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
 Frame = -3

Query: 273 DLAIEIPRRELEGFSSPV-SPLPTSRN----ADEETRTPGSGRLRAVRRRLSMGKRTPTP 109
           +L I+IP R +   + P+ SPLP SR     A +E R+P S RLR++RR LS GK+    
Sbjct: 217 NLVIDIPTRPVALNTPPMNSPLPASRMPGSAAADEMRSPVSARLRSLRRLLSRGKQAVV- 275

Query: 108 GSGSACSPM--GGDLEQGFGGFYGEGSAPPATPPA 10
             G++ SP    GD+EQG  G   E + PP TPP+
Sbjct: 276 --GTSYSPRAGAGDIEQGLAG--AEAARPPKTPPS 306


>ref|XP_003564161.1| PREDICTED: RING-H2 finger protein ATL3-like [Brachypodium
           distachyon]
          Length = 316

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/90 (45%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
 Frame = -3

Query: 273 DLAIEIPRRELE-GFSSPVSPLPTSR---NADEETRTPGSGRLRAVRRRLSMGKRTPTPG 106
           +L I+IP R +  G SS  SPLP SR    A ++ R+P S RLR++RR LS GK      
Sbjct: 225 NLVIDIPPRPVAVGASS--SPLPASRMPGTAADDLRSPLSARLRSLRRLLSRGKHAVVGT 282

Query: 105 SGSACSPMGGDLEQGFGGFYGEGSAPPATP 16
           S S  SP GGD+EQG      +   PP TP
Sbjct: 283 SNS--SPRGGDVEQGLSS-RADAPRPPKTP 309


>dbj|BAD35269.1| putative Avr9/Cf-9 rapidly elicited protein [Oryza sativa Japonica
           Group] gi|125554384|gb|EAY99989.1| hypothetical protein
           OsI_21992 [Oryza sativa Indica Group]
          Length = 312

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 44/100 (44%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
 Frame = -3

Query: 270 LAIEIPRRELEGF-------SSPVSPLPTSRNADEETRTPGSGRLRAVRRRLSMGKRTPT 112
           L I+IP R            SS  +PLP SR AD+  R+P S RLR++RR LS GK+   
Sbjct: 223 LVIDIPSRSAAAAAADSVTSSSASTPLPASRMADD-MRSPVSARLRSLRRLLSRGKQAVV 281

Query: 111 PGSGSACSPM-GGDLEQGFGGFYGEGSAPPAT----PPAN 7
              G + SP  GGD+EQG  G      APP T    PPAN
Sbjct: 282 ---GPSFSPRGGGDIEQGLAG------APPKTPKTPPPAN 312


>ref|NP_001057038.2| Os06g0192800 [Oryza sativa Japonica Group]
           gi|255676809|dbj|BAF18952.2| Os06g0192800, partial
           [Oryza sativa Japonica Group]
          Length = 323

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 44/100 (44%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
 Frame = -3

Query: 270 LAIEIPRRELEGF-------SSPVSPLPTSRNADEETRTPGSGRLRAVRRRLSMGKRTPT 112
           L I+IP R            SS  +PLP SR AD+  R+P S RLR++RR LS GK+   
Sbjct: 234 LVIDIPSRSAAAAAADSVTSSSASTPLPASRMADD-MRSPVSARLRSLRRLLSRGKQAVV 292

Query: 111 PGSGSACSPM-GGDLEQGFGGFYGEGSAPPAT----PPAN 7
              G + SP  GGD+EQG  G      APP T    PPAN
Sbjct: 293 ---GPSFSPRGGGDIEQGLAG------APPKTPKTPPPAN 323


>gb|EAZ36114.1| hypothetical protein OsJ_20425 [Oryza sativa Japonica Group]
          Length = 312

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 44/100 (44%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
 Frame = -3

Query: 270 LAIEIPRRELEGF-------SSPVSPLPTSRNADEETRTPGSGRLRAVRRRLSMGKRTPT 112
           L I+IP R            SS  +PLP SR AD+  R+P S RLR++RR LS GK+   
Sbjct: 223 LVIDIPSRSAAAAAADSVTSSSASTPLPASRMADD-MRSPVSARLRSLRRLLSRGKQAVV 281

Query: 111 PGSGSACSPM-GGDLEQGFGGFYGEGSAPPAT----PPAN 7
              G + SP  GGD+EQG  G      APP T    PPAN
Sbjct: 282 ---GPSFSPRGGGDIEQGLAG------APPKTPKTPPPAN 312


>dbj|BAG91736.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 321

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 44/100 (44%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
 Frame = -3

Query: 270 LAIEIPRRELEGF-------SSPVSPLPTSRNADEETRTPGSGRLRAVRRRLSMGKRTPT 112
           L I+IP R            SS  +PLP SR AD+  R+P S RLR++RR LS GK+   
Sbjct: 232 LVIDIPSRSAAAAAADSVTSSSASTPLPASRMADD-MRSPVSARLRSLRRLLSRGKQAVV 290

Query: 111 PGSGSACSPM-GGDLEQGFGGFYGEGSAPPAT----PPAN 7
              G + SP  GGD+EQG  G      APP T    PPAN
Sbjct: 291 ---GPSFSPRGGGDIEQGLAG------APPKTPKTPPPAN 321


>ref|XP_004964598.1| PREDICTED: E3 ubiquitin-protein ligase EL5-like [Setaria italica]
          Length = 339

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
 Frame = -3

Query: 273 DLAIEIPRRELEGFSSPV-SPLPTSR--NADEETRTPGSGRLRAVRRRLSMGKRTPTPGS 103
           +L I+IP R +   + P+ SPLP SR     ++ R+P S RLR++RR LS+GK+     S
Sbjct: 245 NLVIDIPTRGVAINTPPMNSPLPASRMPGTADDMRSPVSARLRSIRRLLSLGKQAVVGTS 304

Query: 102 GS-ACSPMGGDLEQGFGGFYGEGSAPPATP 16
            S   +   GD+EQG  G   E + PP TP
Sbjct: 305 YSPRAAAAAGDIEQGVAG--AEAARPPKTP 332


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