BLASTX nr result
ID: Zingiber24_contig00028154
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00028154
(396 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270532.2| PREDICTED: small nuclear ribonucleoprotein S... 58 1e-06
ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein S... 57 2e-06
gb|EMT25476.1| hypothetical protein F775_29436 [Aegilops tauschii] 56 4e-06
gb|EMS50224.1| hypothetical protein TRIUR3_26641 [Triticum urartu] 56 4e-06
ref|NP_001045599.1| Os02g0102700 [Oryza sativa Japonica Group] g... 56 4e-06
tpg|DAA44322.1| TPA: hypothetical protein ZEAMMB73_746512 [Zea m... 56 4e-06
ref|XP_003573751.1| PREDICTED: small nuclear ribonucleoprotein S... 56 4e-06
ref|XP_003558388.1| PREDICTED: LOW QUALITY PROTEIN: small nuclea... 56 4e-06
ref|XP_002468194.1| hypothetical protein SORBIDRAFT_01g041430 [S... 56 4e-06
gb|ACG48529.1| small nuclear ribonucleoprotein Sm D3 [Zea mays] 56 4e-06
gb|ACG48317.1| small nuclear ribonucleoprotein Sm D3 [Zea mays] ... 56 4e-06
gb|ACG47545.1| small nuclear ribonucleoprotein Sm D3 [Zea mays] 56 4e-06
ref|NP_001150683.1| LOC100284316 [Zea mays] gi|194696928|gb|ACF8... 56 4e-06
gb|EAY89202.1| hypothetical protein OsI_10698 [Oryza sativa Indi... 56 4e-06
ref|NP_001049511.1| Os03g0240800 [Oryza sativa Japonica Group] g... 56 4e-06
ref|XP_004985050.1| PREDICTED: small nuclear ribonucleoprotein S... 56 6e-06
ref|XP_004951184.1| PREDICTED: small nuclear ribonucleoprotein S... 56 6e-06
gb|ACN32165.1| unknown [Zea mays] gi|413935154|gb|AFW69705.1| hy... 56 6e-06
ref|NP_001152085.1| LOC100285722 [Zea mays] gi|514820730|ref|XP_... 56 6e-06
gb|EXB56305.1| hypothetical protein L484_024844 [Morus notabilis] 55 7e-06
>ref|XP_002270532.2| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Vitis
vinifera] gi|297745546|emb|CBI40711.3| unnamed protein
product [Vitis vinifera]
Length = 132
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FMVIPDMLKNAPMFKRLDARI+GKGSAL
Sbjct: 72 FMVIPDMLKNAPMFKRLDARIKGKGSAL 99
>ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Vitis vinifera]
gi|297744494|emb|CBI37756.3| unnamed protein product
[Vitis vinifera]
Length = 132
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FMVIPDMLKNAPMFKRLDAR++GKGSAL
Sbjct: 72 FMVIPDMLKNAPMFKRLDARVKGKGSAL 99
>gb|EMT25476.1| hypothetical protein F775_29436 [Aegilops tauschii]
Length = 118
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FM+IPDMLKNAPMFKRL+ARIRGKGSA+
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAI 99
>gb|EMS50224.1| hypothetical protein TRIUR3_26641 [Triticum urartu]
Length = 130
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FM+IPDMLKNAPMFKRL+ARIRGKGSA+
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAI 99
>ref|NP_001045599.1| Os02g0102700 [Oryza sativa Japonica Group]
gi|573918238|ref|XP_006646761.1| PREDICTED: small
nuclear ribonucleoprotein Sm D3-like [Oryza brachyantha]
gi|573924290|ref|XP_006649711.1| PREDICTED: small
nuclear ribonucleoprotein Sm D3-like [Oryza brachyantha]
gi|41052905|dbj|BAD07817.1| putative small nuclear
ribonucleoprotein polypeptide D3 [Oryza sativa Japonica
Group] gi|41053239|dbj|BAD08200.1| putative small
nuclear ribonucleoprotein polypeptide D3 [Oryza sativa
Japonica Group] gi|113535130|dbj|BAF07513.1|
Os02g0102700 [Oryza sativa Japonica Group]
gi|215692366|dbj|BAG87786.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215692586|dbj|BAG88006.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737277|dbj|BAG96206.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218189864|gb|EEC72291.1| hypothetical protein
OsI_05466 [Oryza sativa Indica Group]
gi|222621997|gb|EEE56129.1| hypothetical protein
OsJ_05002 [Oryza sativa Japonica Group]
Length = 132
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FM+IPDMLKNAPMFKRL+ARIRGKGSA+
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAI 99
>tpg|DAA44322.1| TPA: hypothetical protein ZEAMMB73_746512 [Zea mays]
Length = 126
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FM+IPDMLKNAPMFKRL+ARIRGKGSA+
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAI 99
>ref|XP_003573751.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Brachypodium
distachyon]
Length = 134
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FM+IPDMLKNAPMFKRL+ARIRGKGSA+
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAI 99
>ref|XP_003558388.1| PREDICTED: LOW QUALITY PROTEIN: small nuclear ribonucleoprotein Sm
D3-like [Brachypodium distachyon]
Length = 132
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FM+IPDMLKNAPMFKRL+ARIRGKGSA+
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAI 99
>ref|XP_002468194.1| hypothetical protein SORBIDRAFT_01g041430 [Sorghum bicolor]
gi|241922048|gb|EER95192.1| hypothetical protein
SORBIDRAFT_01g041430 [Sorghum bicolor]
Length = 132
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FM+IPDMLKNAPMFKRL+ARIRGKGSA+
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAI 99
>gb|ACG48529.1| small nuclear ribonucleoprotein Sm D3 [Zea mays]
Length = 132
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FM+IPDMLKNAPMFKRL+ARIRGKGSA+
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAI 99
>gb|ACG48317.1| small nuclear ribonucleoprotein Sm D3 [Zea mays]
gi|414865766|tpg|DAA44323.1| TPA: small nuclear
ribonucleoprotein Sm D3 [Zea mays]
Length = 132
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FM+IPDMLKNAPMFKRL+ARIRGKGSA+
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAI 99
>gb|ACG47545.1| small nuclear ribonucleoprotein Sm D3 [Zea mays]
Length = 132
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FM+IPDMLKNAPMFKRL+ARIRGKGSA+
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAI 99
>ref|NP_001150683.1| LOC100284316 [Zea mays] gi|194696928|gb|ACF82548.1| unknown [Zea
mays] gi|195619600|gb|ACG31630.1| small nuclear
ribonucleoprotein Sm D3 [Zea mays]
gi|195641042|gb|ACG39989.1| small nuclear
ribonucleoprotein Sm D3 [Zea mays]
gi|413956400|gb|AFW89049.1| Small nuclear
ribonucleoprotein Sm D3 [Zea mays]
Length = 132
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FM+IPDMLKNAPMFKRL+ARIRGKGSA+
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAI 99
>gb|EAY89202.1| hypothetical protein OsI_10698 [Oryza sativa Indica Group]
gi|125585557|gb|EAZ26221.1| hypothetical protein
OsJ_10089 [Oryza sativa Japonica Group]
Length = 134
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FM+IPDMLKNAPMFKRL+ARIRGKGSA+
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAI 99
>ref|NP_001049511.1| Os03g0240800 [Oryza sativa Japonica Group]
gi|108707095|gb|ABF94890.1| Small nuclear
ribonucleoprotein Sm D3, putative, expressed [Oryza
sativa Japonica Group] gi|113547982|dbj|BAF11425.1|
Os03g0240800 [Oryza sativa Japonica Group]
gi|215686515|dbj|BAG87776.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215765251|dbj|BAG86948.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215768316|dbj|BAH00545.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 132
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FM+IPDMLKNAPMFKRL+ARIRGKGSA+
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAI 99
>ref|XP_004985050.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like isoform X1
[Setaria italica]
Length = 139
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FM+IPDMLKNAPMFKRL+ARIRGKGSA+
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAV 99
>ref|XP_004951184.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Setaria
italica]
Length = 132
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FM+IPDMLKNAPMFKRL+ARIRGKGSA+
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAV 99
>gb|ACN32165.1| unknown [Zea mays] gi|413935154|gb|AFW69705.1| hypothetical protein
ZEAMMB73_559735 [Zea mays]
Length = 125
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FM+IPDMLKNAPMFKRL+ARIRGKGSA+
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAV 99
>ref|NP_001152085.1| LOC100285722 [Zea mays] gi|514820730|ref|XP_004985051.1| PREDICTED:
small nuclear ribonucleoprotein Sm D3-like isoform X2
[Setaria italica] gi|194699166|gb|ACF83667.1| unknown
[Zea mays] gi|195652485|gb|ACG45710.1| small nuclear
ribonucleoprotein Sm D3 [Zea mays]
gi|413935155|gb|AFW69706.1| Small nuclear
ribonucleoprotein Sm D3 [Zea mays]
Length = 132
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FM+IPDMLKNAPMFKRL+ARIRGKGSA+
Sbjct: 72 FMIIPDMLKNAPMFKRLEARIRGKGSAV 99
>gb|EXB56305.1| hypothetical protein L484_024844 [Morus notabilis]
Length = 131
Score = 55.5 bits (132), Expect = 7e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -2
Query: 395 FMVIPDMLKNAPMFKRLDARIRGKGSAL 312
FMVIPDMLKNAPMFKRLDARI+GKG++L
Sbjct: 72 FMVIPDMLKNAPMFKRLDARIKGKGASL 99