BLASTX nr result
ID: Zingiber24_contig00028115
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00028115
(980 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006477302.1| PREDICTED: general transcription factor IIH ... 99 2e-18
ref|XP_006440427.1| hypothetical protein CICLE_v10024015mg, part... 99 2e-18
gb|EMJ12143.1| hypothetical protein PRUPE_ppa024121mg [Prunus pe... 96 3e-17
ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like ... 96 3e-17
ref|XP_002266482.1| PREDICTED: general transcription factor IIH ... 94 6e-17
ref|XP_004960540.1| PREDICTED: uncharacterized protein LOC101780... 94 8e-17
ref|XP_004298704.1| PREDICTED: general transcription factor IIH ... 94 1e-16
gb|EOY24508.1| Nucleotide excision repair, TFIIH, subunit TTDA i... 93 1e-16
gb|EMT14713.1| General transcription factor IIH subunit 5 [Aegil... 92 2e-16
gb|EMS64975.1| hypothetical protein TRIUR3_05051 [Triticum urartu] 92 2e-16
ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group] g... 92 2e-16
dbj|BAK07005.1| predicted protein [Hordeum vulgare subsp. vulgare] 92 4e-16
ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|5... 91 7e-16
gb|EEC78671.1| hypothetical protein OsI_18797 [Oryza sativa Indi... 91 7e-16
ref|XP_006417239.1| hypothetical protein EUTSA_v10009271mg [Eutr... 91 9e-16
gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana] 90 1e-15
ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arab... 90 1e-15
ref|NP_172702.1| nucleotide excision repair, TFIIH, subunit TTDA... 90 1e-15
gb|EXC17844.1| hypothetical protein L484_023200 [Morus notabilis] 90 2e-15
ref|XP_006363721.1| PREDICTED: general transcription factor IIH ... 90 2e-15
>ref|XP_006477302.1| PREDICTED: general transcription factor IIH subunit 5-like isoform
X1 [Citrus sinensis] gi|568846947|ref|XP_006477303.1|
PREDICTED: general transcription factor IIH subunit
5-like isoform X2 [Citrus sinensis]
gi|568846949|ref|XP_006477304.1| PREDICTED: general
transcription factor IIH subunit 5-like isoform X3
[Citrus sinensis]
Length = 70
Score = 99.0 bits (245), Expect = 2e-18
Identities = 45/56 (80%), Positives = 52/56 (92%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKPA 733
PMAQFIIN NAS+P SQKFI+H+LD+TH+FVQP+M EMIRS IAEFRDQN+YEKPA
Sbjct: 15 PMAQFIINMNASMPQSQKFIIHILDSTHLFVQPNMAEMIRSAIAEFRDQNSYEKPA 70
>ref|XP_006440427.1| hypothetical protein CICLE_v10024015mg, partial [Citrus clementina]
gi|557542689|gb|ESR53667.1| hypothetical protein
CICLE_v10024015mg, partial [Citrus clementina]
Length = 130
Score = 99.0 bits (245), Expect = 2e-18
Identities = 45/56 (80%), Positives = 52/56 (92%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKPA 733
PMAQFIIN NAS+P SQKFI+H+LD+TH+FVQP+M EMIRS IAEFRDQN+YEKPA
Sbjct: 75 PMAQFIINMNASMPQSQKFIIHILDSTHLFVQPNMAEMIRSAIAEFRDQNSYEKPA 130
>gb|EMJ12143.1| hypothetical protein PRUPE_ppa024121mg [Prunus persica]
gi|462406895|gb|EMJ12359.1| hypothetical protein
PRUPE_ppb011951mg [Prunus persica]
Length = 70
Score = 95.5 bits (236), Expect = 3e-17
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKP 730
PMAQFIINYN +LPPSQ+FI+HVLD+TH+FVQP EMIRS I+EFRDQN+YEKP
Sbjct: 15 PMAQFIINYNNTLPPSQQFIIHVLDSTHLFVQPHAAEMIRSAISEFRDQNSYEKP 69
>ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like [Brachypodium
distachyon]
Length = 457
Score = 95.5 bits (236), Expect = 3e-17
Identities = 43/55 (78%), Positives = 51/55 (92%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKP 730
PMAQFI+N NAS+P S+KFI+H+LD TH+FVQP +GEMIRSKIAEFRDQN+YEKP
Sbjct: 15 PMAQFIVNLNASMPASEKFIVHMLDPTHMFVQPHVGEMIRSKIAEFRDQNSYEKP 69
>ref|XP_002266482.1| PREDICTED: general transcription factor IIH subunit 5 [Vitis
vinifera] gi|297742669|emb|CBI34818.3| unnamed protein
product [Vitis vinifera]
Length = 70
Score = 94.4 bits (233), Expect = 6e-17
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKPA 733
PMAQFIIN NAS+P SQKFI+HVLD+TH+FVQP + EMIRS I+EFR+QN+YEKPA
Sbjct: 15 PMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEFREQNSYEKPA 70
>ref|XP_004960540.1| PREDICTED: uncharacterized protein LOC101780092 [Setaria italica]
Length = 70
Score = 94.0 bits (232), Expect = 8e-17
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKP 730
PMAQFIIN NAS+PPS++FI+H+LD TH+FVQP + EMIRSKI EFRDQN+YEKP
Sbjct: 15 PMAQFIINLNASMPPSERFIVHMLDPTHMFVQPHVAEMIRSKIGEFRDQNSYEKP 69
>ref|XP_004298704.1| PREDICTED: general transcription factor IIH subunit 5-like isoform
1 [Fragaria vesca subsp. vesca]
gi|470125430|ref|XP_004298705.1| PREDICTED: general
transcription factor IIH subunit 5-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 70
Score = 93.6 bits (231), Expect = 1e-16
Identities = 43/55 (78%), Positives = 48/55 (87%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKP 730
PMAQFIINYN SLP SQKFI+HVLD TH+FVQP EMI+S I+EFRDQN+YEKP
Sbjct: 15 PMAQFIINYNNSLPQSQKFIIHVLDGTHLFVQPHAAEMIKSAISEFRDQNSYEKP 69
>gb|EOY24508.1| Nucleotide excision repair, TFIIH, subunit TTDA isoform 1
[Theobroma cacao] gi|508777253|gb|EOY24509.1| Nucleotide
excision repair, TFIIH, subunit TTDA isoform 1
[Theobroma cacao]
Length = 70
Score = 93.2 bits (230), Expect = 1e-16
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKP 730
PMAQFI+N NAS+P SQKFI+HVLDNTH FVQP EMIRS I+EFRDQN+Y+KP
Sbjct: 15 PMAQFIVNLNASMPASQKFIIHVLDNTHFFVQPHAAEMIRSAISEFRDQNSYDKP 69
>gb|EMT14713.1| General transcription factor IIH subunit 5 [Aegilops tauschii]
Length = 70
Score = 92.4 bits (228), Expect = 2e-16
Identities = 39/55 (70%), Positives = 51/55 (92%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKP 730
PMAQFI+N NAS+P S+KFI+H+LD TH+F+QP+MG+ I+SK+AEFRDQN+YEKP
Sbjct: 15 PMAQFIVNMNASMPASEKFIVHILDPTHMFIQPNMGDYIKSKMAEFRDQNSYEKP 69
>gb|EMS64975.1| hypothetical protein TRIUR3_05051 [Triticum urartu]
Length = 94
Score = 92.4 bits (228), Expect = 2e-16
Identities = 39/55 (70%), Positives = 51/55 (92%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKP 730
PMAQFI+N NAS+P S+KFI+H+LD TH+F+QP+MG+ I+SK+AEFRDQN+YEKP
Sbjct: 39 PMAQFIVNMNASMPASEKFIVHILDPTHMFIQPNMGDYIKSKMAEFRDQNSYEKP 93
>ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group]
gi|34393555|dbj|BAC83153.1| unknown protein [Oryza
sativa Japonica Group] gi|113611604|dbj|BAF21982.1|
Os07g0573600 [Oryza sativa Japonica Group]
gi|215707252|dbj|BAG93712.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218199880|gb|EEC82307.1| hypothetical protein
OsI_26568 [Oryza sativa Indica Group]
gi|222637319|gb|EEE67451.1| hypothetical protein
OsJ_24828 [Oryza sativa Japonica Group]
Length = 131
Score = 92.4 bits (228), Expect = 2e-16
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKP 730
PMAQFI+N NAS+P S KFILH+LD TH+FVQP + EMIRSKI+EFRDQN+YEKP
Sbjct: 76 PMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEMIRSKISEFRDQNSYEKP 130
>dbj|BAK07005.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 71
Score = 91.7 bits (226), Expect = 4e-16
Identities = 39/55 (70%), Positives = 50/55 (90%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKP 730
PMAQFI+N NAS+P S KFI+H+LD TH+F+QP+MG+ I+SK+AEFRDQN+YEKP
Sbjct: 16 PMAQFIVNMNASMPASDKFIVHILDPTHMFIQPNMGDYIKSKMAEFRDQNSYEKP 70
>ref|XP_002329886.1| predicted protein [Populus trichocarpa]
gi|566147873|ref|XP_006368720.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|566147875|ref|XP_006368721.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|566147877|ref|XP_006368722.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|550346807|gb|ERP65289.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|550346808|gb|ERP65290.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|550346809|gb|ERP65291.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
Length = 70
Score = 90.9 bits (224), Expect = 7e-16
Identities = 40/56 (71%), Positives = 51/56 (91%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKPA 733
PMAQFIIN NASLP SQKFI+H+LD+TH+FVQP + +MIRS I++FR+QN+YEKP+
Sbjct: 15 PMAQFIINLNASLPASQKFIIHILDSTHMFVQPHVSDMIRSAISDFREQNSYEKPS 70
>gb|EEC78671.1| hypothetical protein OsI_18797 [Oryza sativa Indica Group]
gi|222630525|gb|EEE62657.1| hypothetical protein
OsJ_17460 [Oryza sativa Japonica Group]
Length = 81
Score = 90.9 bits (224), Expect = 7e-16
Identities = 41/55 (74%), Positives = 48/55 (87%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKP 730
PMAQFI+N NAS+P S KFILH+LD TH+FVQP + EMIR KI+EFRDQN+YEKP
Sbjct: 26 PMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEMIRGKISEFRDQNSYEKP 80
>ref|XP_006417239.1| hypothetical protein EUTSA_v10009271mg [Eutrema salsugineum]
gi|557095010|gb|ESQ35592.1| hypothetical protein
EUTSA_v10009271mg [Eutrema salsugineum]
Length = 70
Score = 90.5 bits (223), Expect = 9e-16
Identities = 40/55 (72%), Positives = 49/55 (89%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKP 730
PMAQFI+N N+S+P SQKFI+HVLD TH+FVQP + +MIRS I+EFRDQN+YEKP
Sbjct: 15 PMAQFIVNMNSSMPSSQKFIIHVLDGTHLFVQPHVEQMIRSTISEFRDQNSYEKP 69
>gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]
Length = 113
Score = 90.1 bits (222), Expect = 1e-15
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKP 730
PM QFI+N N S+PPSQKFI+HVLD+TH+FVQP + +MIRS I++FRDQN+YEKP
Sbjct: 57 PMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDFRDQNSYEKP 111
>ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arabidopsis lyrata subsp.
lyrata] gi|297335775|gb|EFH66192.1| hypothetical protein
ARALYDRAFT_471390 [Arabidopsis lyrata subsp. lyrata]
Length = 71
Score = 90.1 bits (222), Expect = 1e-15
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKP 730
PM QFI+N N S+PPSQKFI+HVLD+TH+FVQP + +MIRS I++FRDQN+YEKP
Sbjct: 15 PMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDFRDQNSYEKP 69
>ref|NP_172702.1| nucleotide excision repair, TFIIH, subunit TTDA [Arabidopsis
thaliana] gi|38566546|gb|AAR24163.1| At1g12400
[Arabidopsis thaliana] gi|40823747|gb|AAR92302.1|
At1g12400 [Arabidopsis thaliana]
gi|332190754|gb|AEE28875.1| nucleotide excision repair,
TFIIH, subunit TTDA [Arabidopsis thaliana]
Length = 71
Score = 90.1 bits (222), Expect = 1e-15
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKP 730
PM QFI+N N S+PPSQKFI+HVLD+TH+FVQP + +MIRS I++FRDQN+YEKP
Sbjct: 15 PMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDFRDQNSYEKP 69
>gb|EXC17844.1| hypothetical protein L484_023200 [Morus notabilis]
Length = 55
Score = 89.7 bits (221), Expect = 2e-15
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = +2
Query: 569 MAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKPA 733
MAQFIIN N SLP SQKFI+HVLD+TH+FVQP+ EMIR IAEFRD+N+YEKPA
Sbjct: 1 MAQFIINMNNSLPASQKFIIHVLDSTHLFVQPNAAEMIRGAIAEFRDRNSYEKPA 55
>ref|XP_006363721.1| PREDICTED: general transcription factor IIH subunit 5-like [Solanum
tuberosum]
Length = 70
Score = 89.7 bits (221), Expect = 2e-15
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = +2
Query: 566 PMAQFIINYNASLPPSQKFILHVLDNTHIFVQPSMGEMIRSKIAEFRDQNTYEKPA 733
PM QFIIN NASLP SQKFI+HVLDNTH+FV+ M MIRS I++FRD NTYEKPA
Sbjct: 15 PMTQFIINMNASLPQSQKFIIHVLDNTHLFVRSDMAGMIRSAISDFRDANTYEKPA 70