BLASTX nr result
ID: Zingiber24_contig00028064
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00028064
(211 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006345153.1| PREDICTED: putative pre-mRNA-splicing factor... 130 2e-28
ref|XP_006345152.1| PREDICTED: putative pre-mRNA-splicing factor... 130 2e-28
ref|XP_004138188.1| PREDICTED: putative pre-mRNA-splicing factor... 130 2e-28
ref|XP_006837062.1| hypothetical protein AMTR_s00110p00073830 [A... 129 4e-28
ref|XP_006374093.1| RNA helicase family protein [Populus trichoc... 128 7e-28
ref|XP_004236490.1| PREDICTED: putative pre-mRNA-splicing factor... 127 1e-27
gb|EXC33541.1| Putative pre-mRNA-splicing factor ATP-dependent R... 127 2e-27
ref|XP_004155050.1| PREDICTED: LOW QUALITY PROTEIN: putative pre... 126 3e-27
ref|XP_006477633.1| PREDICTED: putative pre-mRNA-splicing factor... 125 4e-27
emb|CBI15151.3| unnamed protein product [Vitis vinifera] 125 4e-27
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor... 125 4e-27
ref|XP_004299319.1| PREDICTED: putative pre-mRNA-splicing factor... 125 6e-27
ref|XP_006582003.1| PREDICTED: putative pre-mRNA-splicing factor... 124 1e-26
gb|EOY22009.1| RNA helicase family protein isoform 3 [Theobroma ... 123 2e-26
gb|EOY22008.1| RNA helicase family protein isoform 2 [Theobroma ... 123 2e-26
gb|EOY22007.1| RNA helicase family protein isoform 1 [Theobroma ... 123 2e-26
ref|XP_004499486.1| PREDICTED: putative pre-mRNA-splicing factor... 123 2e-26
ref|XP_004499485.1| PREDICTED: putative pre-mRNA-splicing factor... 123 2e-26
gb|EPS61353.1| hypothetical protein M569_13444, partial [Genlise... 122 4e-26
gb|EMJ09774.1| hypothetical protein PRUPE_ppa023487mg [Prunus pe... 122 4e-26
>ref|XP_006345153.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like isoform X2 [Solanum tuberosum]
Length = 909
Score = 130 bits (326), Expect = 2e-28
Identities = 59/70 (84%), Positives = 68/70 (97%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
AK+A +KLQE+R+TLP+YPYRD+LLQAI+DHQV+VIVGETGSGKTTQIPQYLHEAGYTKR
Sbjct: 254 AKSAFEKLQEDRKTLPMYPYRDDLLQAINDHQVLVIVGETGSGKTTQIPQYLHEAGYTKR 313
Query: 181 GLVGCTQPRR 210
G +GCTQPRR
Sbjct: 314 GKIGCTQPRR 323
>ref|XP_006345152.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like isoform X1 [Solanum tuberosum]
Length = 1050
Score = 130 bits (326), Expect = 2e-28
Identities = 59/70 (84%), Positives = 68/70 (97%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
AK+A +KLQE+R+TLP+YPYRD+LLQAI+DHQV+VIVGETGSGKTTQIPQYLHEAGYTKR
Sbjct: 395 AKSAFEKLQEDRKTLPMYPYRDDLLQAINDHQVLVIVGETGSGKTTQIPQYLHEAGYTKR 454
Query: 181 GLVGCTQPRR 210
G +GCTQPRR
Sbjct: 455 GKIGCTQPRR 464
>ref|XP_004138188.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Cucumis sativus]
Length = 1055
Score = 130 bits (326), Expect = 2e-28
Identities = 60/70 (85%), Positives = 69/70 (98%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
A++AL+KLQEER+TLPIYPYRD+LLQA++D+QV+VIVGETGSGKTTQIPQYLHEAGYTKR
Sbjct: 395 AQSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKR 454
Query: 181 GLVGCTQPRR 210
G VGCTQPRR
Sbjct: 455 GKVGCTQPRR 464
>ref|XP_006837062.1| hypothetical protein AMTR_s00110p00073830 [Amborella trichopoda]
gi|548839655|gb|ERM99915.1| hypothetical protein
AMTR_s00110p00073830 [Amborella trichopoda]
Length = 1044
Score = 129 bits (324), Expect = 4e-28
Identities = 59/70 (84%), Positives = 66/70 (94%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
AK L+KLQ+ER+TLPIYPYR+ELLQA+ DHQV+VIVGETGSGKTTQIPQYLHEAGYTKR
Sbjct: 389 AKTMLEKLQDERKTLPIYPYREELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKR 448
Query: 181 GLVGCTQPRR 210
G +GCTQPRR
Sbjct: 449 GKIGCTQPRR 458
>ref|XP_006374093.1| RNA helicase family protein [Populus trichocarpa]
gi|550321716|gb|ERP51890.1| RNA helicase family protein
[Populus trichocarpa]
Length = 1057
Score = 128 bits (322), Expect = 7e-28
Identities = 59/70 (84%), Positives = 68/70 (97%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
AK+AL+KLQE+R+TLPIYPYR+ELL+AI+DHQV++IVGETGSGKTTQIPQYLHEAGYTK
Sbjct: 398 AKSALEKLQEDRKTLPIYPYREELLKAINDHQVIIIVGETGSGKTTQIPQYLHEAGYTKH 457
Query: 181 GLVGCTQPRR 210
G VGCTQPRR
Sbjct: 458 GKVGCTQPRR 467
>ref|XP_004236490.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Solanum lycopersicum]
Length = 1050
Score = 127 bits (320), Expect = 1e-27
Identities = 57/70 (81%), Positives = 67/70 (95%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
A +A +KLQE+R+TLP+YPYRD+LLQA++DHQV+VIVGETGSGKTTQIPQYLHEAGYTKR
Sbjct: 395 ANSAFEKLQEDRKTLPMYPYRDDLLQAVNDHQVLVIVGETGSGKTTQIPQYLHEAGYTKR 454
Query: 181 GLVGCTQPRR 210
G +GCTQPRR
Sbjct: 455 GKIGCTQPRR 464
>gb|EXC33541.1| Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
[Morus notabilis]
Length = 1043
Score = 127 bits (319), Expect = 2e-27
Identities = 59/70 (84%), Positives = 66/70 (94%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
A++AL+KLQ ER+TLPIY YRDELL+A+HDHQV+VIVGETGSGKTTQIPQYLHEAGYTK
Sbjct: 411 AQSALEKLQAERKTLPIYQYRDELLKAVHDHQVLVIVGETGSGKTTQIPQYLHEAGYTKH 470
Query: 181 GLVGCTQPRR 210
G VGCTQPRR
Sbjct: 471 GKVGCTQPRR 480
>ref|XP_004155050.1| PREDICTED: LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16-like, partial [Cucumis
sativus]
Length = 1049
Score = 126 bits (317), Expect = 3e-27
Identities = 58/70 (82%), Positives = 68/70 (97%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
A++AL+KLQEER+TLPIYPYRD+LLQA++D+QV+VIVGE GSGKTTQIPQYLHEAGYTK+
Sbjct: 389 AQSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGEAGSGKTTQIPQYLHEAGYTKQ 448
Query: 181 GLVGCTQPRR 210
G VGCTQPRR
Sbjct: 449 GKVGCTQPRR 458
>ref|XP_006477633.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Citrus sinensis]
Length = 1051
Score = 125 bits (315), Expect = 4e-27
Identities = 58/69 (84%), Positives = 67/69 (97%)
Frame = +1
Query: 4 KNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKRG 183
K+AL+ LQEER+TLPIYPYRDELLQA++++QV+VIVGETGSGKTTQIPQYLHEAGYTK+G
Sbjct: 398 KSALEMLQEERKTLPIYPYRDELLQAVNEYQVLVIVGETGSGKTTQIPQYLHEAGYTKQG 457
Query: 184 LVGCTQPRR 210
VGCTQPRR
Sbjct: 458 KVGCTQPRR 466
>emb|CBI15151.3| unnamed protein product [Vitis vinifera]
Length = 954
Score = 125 bits (315), Expect = 4e-27
Identities = 57/70 (81%), Positives = 66/70 (94%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
AK+ L+KLQE+R+ LPIYPYRDELL+A+ DHQ++VIVGETGSGKTTQIPQYLHE+GYTKR
Sbjct: 401 AKSELEKLQEDRKMLPIYPYRDELLKAVDDHQILVIVGETGSGKTTQIPQYLHESGYTKR 460
Query: 181 GLVGCTQPRR 210
G VGCTQPRR
Sbjct: 461 GKVGCTQPRR 470
>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Vitis vinifera]
Length = 1056
Score = 125 bits (315), Expect = 4e-27
Identities = 57/70 (81%), Positives = 66/70 (94%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
AK+ L+KLQE+R+ LPIYPYRDELL+A+ DHQ++VIVGETGSGKTTQIPQYLHE+GYTKR
Sbjct: 401 AKSELEKLQEDRKMLPIYPYRDELLKAVDDHQILVIVGETGSGKTTQIPQYLHESGYTKR 460
Query: 181 GLVGCTQPRR 210
G VGCTQPRR
Sbjct: 461 GKVGCTQPRR 470
>ref|XP_004299319.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Fragaria vesca subsp. vesca]
Length = 1042
Score = 125 bits (314), Expect = 6e-27
Identities = 58/70 (82%), Positives = 66/70 (94%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
AK+ L+KLQE+R+TLPIY YRDELL+A+ DHQV+VIVGETGSGKTTQIPQYLHEAGYTKR
Sbjct: 390 AKSELEKLQEDRKTLPIYLYRDELLKAVDDHQVLVIVGETGSGKTTQIPQYLHEAGYTKR 449
Query: 181 GLVGCTQPRR 210
G +GCTQPRR
Sbjct: 450 GKIGCTQPRR 459
>ref|XP_006582003.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16 [Glycine max]
Length = 1046
Score = 124 bits (312), Expect = 1e-26
Identities = 55/70 (78%), Positives = 66/70 (94%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
AK+A + LQEER+ LP++PYRDELL+A+H+HQV+VIVGETGSGKTTQIPQYLHEAGYTKR
Sbjct: 393 AKSAFEALQEERKKLPMFPYRDELLEAVHNHQVLVIVGETGSGKTTQIPQYLHEAGYTKR 452
Query: 181 GLVGCTQPRR 210
G++ CTQPRR
Sbjct: 453 GMIACTQPRR 462
>gb|EOY22009.1| RNA helicase family protein isoform 3 [Theobroma cacao]
Length = 924
Score = 123 bits (309), Expect = 2e-26
Identities = 57/70 (81%), Positives = 65/70 (92%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
AK+ L+KLQE+R+TLPIYPYRD+LL+A+ D QV+VIVGETGSGKTTQIPQYLHEAGYTK
Sbjct: 269 AKSELEKLQEDRKTLPIYPYRDDLLKAVEDFQVLVIVGETGSGKTTQIPQYLHEAGYTKH 328
Query: 181 GLVGCTQPRR 210
G VGCTQPRR
Sbjct: 329 GKVGCTQPRR 338
>gb|EOY22008.1| RNA helicase family protein isoform 2 [Theobroma cacao]
Length = 1055
Score = 123 bits (309), Expect = 2e-26
Identities = 57/70 (81%), Positives = 65/70 (92%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
AK+ L+KLQE+R+TLPIYPYRD+LL+A+ D QV+VIVGETGSGKTTQIPQYLHEAGYTK
Sbjct: 400 AKSELEKLQEDRKTLPIYPYRDDLLKAVEDFQVLVIVGETGSGKTTQIPQYLHEAGYTKH 459
Query: 181 GLVGCTQPRR 210
G VGCTQPRR
Sbjct: 460 GKVGCTQPRR 469
>gb|EOY22007.1| RNA helicase family protein isoform 1 [Theobroma cacao]
Length = 1054
Score = 123 bits (309), Expect = 2e-26
Identities = 57/70 (81%), Positives = 65/70 (92%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
AK+ L+KLQE+R+TLPIYPYRD+LL+A+ D QV+VIVGETGSGKTTQIPQYLHEAGYTK
Sbjct: 400 AKSELEKLQEDRKTLPIYPYRDDLLKAVEDFQVLVIVGETGSGKTTQIPQYLHEAGYTKH 459
Query: 181 GLVGCTQPRR 210
G VGCTQPRR
Sbjct: 460 GKVGCTQPRR 469
>ref|XP_004499486.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like isoform X2 [Cicer arietinum]
Length = 904
Score = 123 bits (309), Expect = 2e-26
Identities = 57/70 (81%), Positives = 64/70 (91%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
AK+AL+ LQEER+ LPIY YRDELLQA+ DHQV+VIVGETGSGKTTQIPQYLHEAGYTK
Sbjct: 252 AKSALEALQEERKKLPIYHYRDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKH 311
Query: 181 GLVGCTQPRR 210
G++ CTQPRR
Sbjct: 312 GMIACTQPRR 321
>ref|XP_004499485.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like isoform X1 [Cicer arietinum]
Length = 905
Score = 123 bits (309), Expect = 2e-26
Identities = 57/70 (81%), Positives = 64/70 (91%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
AK+AL+ LQEER+ LPIY YRDELLQA+ DHQV+VIVGETGSGKTTQIPQYLHEAGYTK
Sbjct: 253 AKSALEALQEERKKLPIYHYRDELLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKH 312
Query: 181 GLVGCTQPRR 210
G++ CTQPRR
Sbjct: 313 GMIACTQPRR 322
>gb|EPS61353.1| hypothetical protein M569_13444, partial [Genlisea aurea]
Length = 456
Score = 122 bits (307), Expect = 4e-26
Identities = 56/70 (80%), Positives = 64/70 (91%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
+K A KLQ ER+ LPIYPYRD+LLQA++D+QV+VIVGETGSGKTTQIPQYLHEAGYTKR
Sbjct: 123 SKTAFDKLQAERKLLPIYPYRDDLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKR 182
Query: 181 GLVGCTQPRR 210
G +GCTQPRR
Sbjct: 183 GKIGCTQPRR 192
>gb|EMJ09774.1| hypothetical protein PRUPE_ppa023487mg [Prunus persica]
Length = 1052
Score = 122 bits (307), Expect = 4e-26
Identities = 55/70 (78%), Positives = 66/70 (94%)
Frame = +1
Query: 1 AKNALQKLQEERQTLPIYPYRDELLQAIHDHQVMVIVGETGSGKTTQIPQYLHEAGYTKR 180
AK+ L+KLQ++R+TLPIY YRD+LL+A+ +HQV+VIVGETGSGKTTQIPQYLHEAGYTKR
Sbjct: 397 AKSGLEKLQDDRKTLPIYTYRDKLLEAVENHQVLVIVGETGSGKTTQIPQYLHEAGYTKR 456
Query: 181 GLVGCTQPRR 210
G +GCTQPRR
Sbjct: 457 GKIGCTQPRR 466