BLASTX nr result
ID: Zingiber24_contig00027999
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00027999
(396 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006427235.1| hypothetical protein CICLE_v10026288mg [Citr... 66 4e-09
ref|XP_006465354.1| PREDICTED: peptide deformylase 1A, chloropla... 66 5e-09
ref|XP_004302968.1| PREDICTED: peptide deformylase 1A, chloropla... 62 1e-07
ref|XP_004156807.1| PREDICTED: peptide deformylase 1A, chloropla... 61 1e-07
ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloropla... 61 1e-07
ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide defo... 61 1e-07
ref|XP_002298107.2| PEPTIDE DEFORMYLASE 1A family protein [Popul... 60 2e-07
gb|EMJ18576.1| hypothetical protein PRUPE_ppa023556mg, partial [... 60 2e-07
ref|XP_002890102.1| hypothetical protein ARALYDRAFT_334826 [Arab... 60 2e-07
ref|XP_006305911.1| hypothetical protein CARUB_v10011124mg [Caps... 60 3e-07
gb|EPS65471.1| hypothetical protein M569_09306, partial [Genlise... 59 5e-07
gb|EXC41717.1| Peptide deformylase 1A [Morus notabilis] 59 7e-07
gb|EOY26497.1| Peptide deformylase 1A [Theobroma cacao] 59 7e-07
gb|ABK22950.1| unknown [Picea sitchensis] 59 7e-07
ref|NP_001234703.1| peptide deformylase 1A, chloroplastic [Solan... 59 9e-07
ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus c... 59 9e-07
gb|AAD39667.1|AC007591_32 Simalar to gi|4377403 Polypeptide Defo... 58 1e-06
ref|XP_006359723.1| PREDICTED: peptide deformylase 1A, chloropla... 58 1e-06
ref|NP_563974.1| peptide deformylase 1A [Arabidopsis thaliana] g... 58 1e-06
dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas] 57 3e-06
>ref|XP_006427235.1| hypothetical protein CICLE_v10026288mg [Citrus clementina]
gi|557529225|gb|ESR40475.1| hypothetical protein
CICLE_v10026288mg [Citrus clementina]
Length = 266
Score = 66.2 bits (160), Expect = 4e-09
Identities = 35/56 (62%), Positives = 39/56 (69%)
Frame = -1
Query: 168 PELKKRTFNRVSAASWLPGFGTKKEKAPLPEIVKAGDPVLHEPAGEVSVQEIGSEK 1
P K RT + +S A WL G G K KA LPEIV+AGDPVLHEPA EV EIGSE+
Sbjct: 48 PHRKARTTSAISKAGWLLGLGQNK-KAKLPEIVQAGDPVLHEPAREVDPGEIGSER 102
>ref|XP_006465354.1| PREDICTED: peptide deformylase 1A, chloroplastic-like [Citrus
sinensis]
Length = 266
Score = 65.9 bits (159), Expect = 5e-09
Identities = 35/56 (62%), Positives = 39/56 (69%)
Frame = -1
Query: 168 PELKKRTFNRVSAASWLPGFGTKKEKAPLPEIVKAGDPVLHEPAGEVSVQEIGSEK 1
P K RT + +S A WL G G K KA LPEIV+AGDPVLHEPA EV EIGSE+
Sbjct: 48 PHRKARTTSTISKAGWLLGLGQNK-KAMLPEIVQAGDPVLHEPAREVDPGEIGSER 102
>ref|XP_004302968.1| PREDICTED: peptide deformylase 1A, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 268
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = -1
Query: 138 VSAASWLPGFGTKKEKAPLPEIVKAGDPVLHEPAGEVSVQEIGSEK 1
V+ A W G G KK+ LP+IVKAGDPVLHEPA +V V++IGSE+
Sbjct: 61 VAKAGWFLGLGEKKKGLSLPDIVKAGDPVLHEPARDVEVEDIGSER 106
>ref|XP_004156807.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 2
[Cucumis sativus]
Length = 237
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -1
Query: 174 PLPELKKRTFNRVSAASWLPGFGTKKEKAPLPEIVKAGDPVLHEPAGEVSVQEIGSEK 1
P+P+ + ++ A W G G +K K LP IVKAGDPVLHEPA EV +EIGSEK
Sbjct: 49 PVPKTYSSSSTSIAKAGWFLGLGEQK-KMSLPSIVKAGDPVLHEPAREVDPKEIGSEK 105
>ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 1
[Cucumis sativus]
Length = 267
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -1
Query: 174 PLPELKKRTFNRVSAASWLPGFGTKKEKAPLPEIVKAGDPVLHEPAGEVSVQEIGSEK 1
P+P+ + ++ A W G G +K K LP IVKAGDPVLHEPA EV +EIGSEK
Sbjct: 49 PVPKTYSSSSTSIAKAGWFLGLGEQK-KMSLPSIVKAGDPVLHEPAREVDPKEIGSEK 105
>ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide deformylase 1A,
chloroplastic-like [Cucumis sativus]
Length = 267
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = -1
Query: 174 PLPELKKRTFNRVSAASWLPGFGTKKEKAPLPEIVKAGDPVLHEPAGEVSVQEIGSEK 1
P+P+ + ++ A W G G +K K LP IVKAGDPVLHEPA EV +EIGSEK
Sbjct: 49 PVPKTYSSSSTSIAKAGWFLGLGEQK-KMSLPSIVKAGDPVLHEPAREVDPKEIGSEK 105
>ref|XP_002298107.2| PEPTIDE DEFORMYLASE 1A family protein [Populus trichocarpa]
gi|550347526|gb|EEE82912.2| PEPTIDE DEFORMYLASE 1A
family protein [Populus trichocarpa]
Length = 299
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/53 (58%), Positives = 37/53 (69%)
Frame = -1
Query: 159 KKRTFNRVSAASWLPGFGTKKEKAPLPEIVKAGDPVLHEPAGEVSVQEIGSEK 1
K + + + A WL G G KK K LP+IVKAGDPVLHEPA EV +EIGSE+
Sbjct: 86 KSLSSSHTAKAGWLLGMGEKK-KTSLPDIVKAGDPVLHEPAREVDPKEIGSER 137
>gb|EMJ18576.1| hypothetical protein PRUPE_ppa023556mg, partial [Prunus persica]
Length = 249
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = -1
Query: 138 VSAASWLPGFGTKKEKAPLPEIVKAGDPVLHEPAGEVSVQEIGSEK 1
V+ A WL G G KK+ LP+IVKAGDPVLHEPA +V +IGSE+
Sbjct: 42 VAKAGWLLGLGEKKKSTSLPDIVKAGDPVLHEPARDVEPGDIGSER 87
>ref|XP_002890102.1| hypothetical protein ARALYDRAFT_334826 [Arabidopsis lyrata subsp.
lyrata] gi|297335944|gb|EFH66361.1| hypothetical protein
ARALYDRAFT_334826 [Arabidopsis lyrata subsp. lyrata]
Length = 270
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -1
Query: 129 ASWLPGFGTKKEKAPLPEIVKAGDPVLHEPAGEVSVQEIGSEK 1
A WL G G KK+K LPEIV AGDPVLHE A EV +EIGSE+
Sbjct: 66 AGWLLGLGEKKKKVDLPEIVAAGDPVLHEKAREVDPEEIGSER 108
>ref|XP_006305911.1| hypothetical protein CARUB_v10011124mg [Capsella rubella]
gi|482574622|gb|EOA38809.1| hypothetical protein
CARUB_v10011124mg [Capsella rubella]
Length = 270
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -1
Query: 129 ASWLPGFGTKKEKAPLPEIVKAGDPVLHEPAGEVSVQEIGSEK 1
A WL G G KK+K LPEIV AGDPVLHE A EV +EIGSE+
Sbjct: 66 AGWLLGLGEKKKKVELPEIVGAGDPVLHEKAREVDPEEIGSER 108
>gb|EPS65471.1| hypothetical protein M569_09306, partial [Genlisea aurea]
Length = 206
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/43 (60%), Positives = 31/43 (72%)
Frame = -1
Query: 129 ASWLPGFGTKKEKAPLPEIVKAGDPVLHEPAGEVSVQEIGSEK 1
A W G K+PLPEIVKAGDPVLHEPA +V +++GSEK
Sbjct: 2 AGWFLGLSRNNNKSPLPEIVKAGDPVLHEPAEDVPPEDVGSEK 44
>gb|EXC41717.1| Peptide deformylase 1A [Morus notabilis]
Length = 273
Score = 58.9 bits (141), Expect = 7e-07
Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Frame = -1
Query: 198 FGEVGTQSPLPEL--KKRTFN----RVSAASWLPGFGTKKEKAPLPEIVKAGDPVLHEPA 37
FG + + P + +RT++ ++ A WL G G KK K LP+IVKAGDPVLHEPA
Sbjct: 41 FGHLDPKQPPNAIFTTRRTYSPRSPSMARAGWLLGLGEKK-KTSLPDIVKAGDPVLHEPA 99
Query: 36 GEVSVQEIGSEK 1
EV EIGS+K
Sbjct: 100 REVEPGEIGSDK 111
>gb|EOY26497.1| Peptide deformylase 1A [Theobroma cacao]
Length = 269
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = -1
Query: 138 VSAASWLPGFGTKKEKAPLPEIVKAGDPVLHEPAGEVSVQEIGSE 4
V+ A W G G KK K LPEIVKAGDPVLHEPA E+ EIGSE
Sbjct: 63 VAKAGWFLGLGEKK-KTSLPEIVKAGDPVLHEPAREIDPDEIGSE 106
>gb|ABK22950.1| unknown [Picea sitchensis]
Length = 305
Score = 58.9 bits (141), Expect = 7e-07
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 10/106 (9%)
Frame = -1
Query: 288 LRCSSARTVVDA---LRFSSCAAGCYPLRRHG--GFGEVGTQSPLPELKKRTFNRVSAAS 124
L C++ T+V + + C+ L G +G +GT+ P+ +RT + V+ A
Sbjct: 40 LACNATTTLVSTSVGIHSRLLSTSCHLLNVDGCRKYGLLGTK-PMQRGHQRT-STVALAG 97
Query: 123 WLPGFGTKK-----EKAPLPEIVKAGDPVLHEPAGEVSVQEIGSEK 1
GFG KK +K LPEIV+AGDPVLHE A EV+V EIGSE+
Sbjct: 98 GFFGFGKKKTGFGKKKTVLPEIVQAGDPVLHECAAEVAVDEIGSER 143
>ref|NP_001234703.1| peptide deformylase 1A, chloroplastic [Solanum lycopersicum]
gi|17433049|sp|Q9FUZ0.1|DEF1A_SOLLC RecName:
Full=Peptide deformylase 1A, chloroplastic; Short=PDF
1A; AltName: Full=Polypeptide deformylase; Flags:
Precursor gi|11320968|gb|AAG33981.1|AF271258_1 peptide
deformylase-like protein [Solanum lycopersicum]
Length = 277
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/53 (50%), Positives = 39/53 (73%)
Frame = -1
Query: 159 KKRTFNRVSAASWLPGFGTKKEKAPLPEIVKAGDPVLHEPAGEVSVQEIGSEK 1
KK + + A W G G KK++A +P+IVKAGDPVLHEP+ ++ ++EIGSE+
Sbjct: 64 KKNYSSATARAGWFLGLGEKKKQA-MPDIVKAGDPVLHEPSQDIPLEEIGSER 115
>ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus communis]
gi|223543236|gb|EEF44768.1| polypeptide deformylase,
putative [Ricinus communis]
Length = 266
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/53 (56%), Positives = 36/53 (67%)
Frame = -1
Query: 159 KKRTFNRVSAASWLPGFGTKKEKAPLPEIVKAGDPVLHEPAGEVSVQEIGSEK 1
K + + ++ A WL G G K K LP+IVKAGDPVLHEPA EV EIGSE+
Sbjct: 53 KSLSSSSIAKAGWLLGLGENK-KMSLPDIVKAGDPVLHEPAREVDPDEIGSER 104
>gb|AAD39667.1|AC007591_32 Simalar to gi|4377403 Polypeptide Deformylase from Chlamydia
pneumoniae genome gb|AE001687 [Arabidopsis thaliana]
gi|13605760|gb|AAK32873.1|AF361861_1 At1g15390/F9L1_34
[Arabidopsis thaliana] gi|22136570|gb|AAM91071.1|
At1g15390/F9L1_34 [Arabidopsis thaliana]
Length = 259
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/43 (65%), Positives = 31/43 (72%)
Frame = -1
Query: 129 ASWLPGFGTKKEKAPLPEIVKAGDPVLHEPAGEVSVQEIGSEK 1
A WL G G KK+K LPEIV +GDPVLHE A EV EIGSE+
Sbjct: 55 AGWLLGLGEKKKKVDLPEIVASGDPVLHEKAREVDPGEIGSER 97
>ref|XP_006359723.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform X1
[Solanum tuberosum] gi|565387901|ref|XP_006359724.1|
PREDICTED: peptide deformylase 1A, chloroplastic-like
isoform X2 [Solanum tuberosum]
gi|565387903|ref|XP_006359725.1| PREDICTED: peptide
deformylase 1A, chloroplastic-like isoform X3 [Solanum
tuberosum] gi|565387905|ref|XP_006359726.1| PREDICTED:
peptide deformylase 1A, chloroplastic-like isoform X4
[Solanum tuberosum] gi|565387907|ref|XP_006359727.1|
PREDICTED: peptide deformylase 1A, chloroplastic-like
isoform X5 [Solanum tuberosum]
Length = 276
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/55 (50%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = -1
Query: 162 LKKRTFNRVSA-ASWLPGFGTKKEKAPLPEIVKAGDPVLHEPAGEVSVQEIGSEK 1
+ KR ++ +A A W G G KK++ +P+IVKAGDPVLHEP+ +V ++EIGSE+
Sbjct: 61 VSKRNYSSTTARAGWFLGLGEKKKQV-MPDIVKAGDPVLHEPSQDVPLEEIGSER 114
>ref|NP_563974.1| peptide deformylase 1A [Arabidopsis thaliana]
gi|334302914|sp|Q9FV53.3|DEF1A_ARATH RecName:
Full=Peptide deformylase 1A,
chloroplastic/mitochondrial; Short=AtDEF1;
Short=AtPDF1A; Short=PDF 1A; AltName: Full=Polypeptide
deformylase; Flags: Precursor
gi|11320952|gb|AAG33973.1|AF250959_1 peptide
deformylase-like protein [Arabidopsis thaliana]
gi|332191194|gb|AEE29315.1| peptide deformylase 1A
[Arabidopsis thaliana]
Length = 269
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/43 (65%), Positives = 31/43 (72%)
Frame = -1
Query: 129 ASWLPGFGTKKEKAPLPEIVKAGDPVLHEPAGEVSVQEIGSEK 1
A WL G G KK+K LPEIV +GDPVLHE A EV EIGSE+
Sbjct: 65 AGWLLGLGEKKKKVDLPEIVASGDPVLHEKAREVDPGEIGSER 107
>dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]
Length = 274
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/43 (65%), Positives = 31/43 (72%)
Frame = -1
Query: 129 ASWLPGFGTKKEKAPLPEIVKAGDPVLHEPAGEVSVQEIGSEK 1
A W G G KK K P+IVKAGDPVLHEPA EV +EIGSE+
Sbjct: 71 AGWFLGLGEKK-KTSFPDIVKAGDPVLHEPAREVDPEEIGSER 112