BLASTX nr result
ID: Zingiber24_contig00027668
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00027668
(273 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006656845.1| PREDICTED: pentatricopeptide repeat-containi... 115 8e-24
ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
ref|XP_004965136.1| PREDICTED: pentatricopeptide repeat-containi... 112 5e-23
dbj|BAD45723.1| putative pentatricopeptide repeat-containing pro... 110 3e-22
ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group] g... 110 3e-22
gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japo... 110 3e-22
ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [S... 107 2e-21
gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays] 105 6e-21
gb|EOX95861.1| Pentatricopeptide repeat superfamily protein, put... 94 1e-17
gb|AGZ20103.1| pentatricopeptide repeat-containing protein [Came... 94 2e-17
ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi... 90 4e-16
gb|EMS48434.1| hypothetical protein TRIUR3_02205 [Triticum urartu] 88 1e-15
gb|ESW32485.1| hypothetical protein PHAVU_002G326200g [Phaseolus... 87 2e-15
ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containi... 87 3e-15
ref|XP_002320827.2| pentatricopeptide repeat-containing family p... 86 7e-15
ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containi... 83 3e-14
ref|XP_004308336.1| PREDICTED: pentatricopeptide repeat-containi... 83 4e-14
gb|EMT24346.1| hypothetical protein F775_12218 [Aegilops tauschii] 82 7e-14
ref|XP_004503311.1| PREDICTED: pentatricopeptide repeat-containi... 81 2e-13
ref|XP_004503310.1| PREDICTED: pentatricopeptide repeat-containi... 81 2e-13
>ref|XP_006656845.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Oryza brachyantha]
Length = 632
Score = 115 bits (287), Expect = 8e-24
Identities = 56/86 (65%), Positives = 66/86 (76%)
Frame = +2
Query: 14 AHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVTYSTL 193
A+EL+ RME + VA N+VTLNT V G+CR G G AL+FFR+K+ W E KGNAVTYSTL
Sbjct: 266 AYELVGRMENKGVAQNIVTLNTIVGGLCRAGRAGAALEFFREKRTVWTEAKGNAVTYSTL 325
Query: 194 IGAFLHSNNIGKATTLFDEMIKEGVS 271
+GAFLHSNNIG A LF EM+ EG S
Sbjct: 326 VGAFLHSNNIGMAMALFHEMMTEGHS 351
>ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 114 bits (286), Expect = 1e-23
Identities = 54/86 (62%), Positives = 66/86 (76%)
Frame = +2
Query: 14 AHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVTYSTL 193
A EL+ +MEKERV N VTLNT V G+C G +G AL+FFR+K+ WPE +GNAVTYSTL
Sbjct: 265 ACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTL 324
Query: 194 IGAFLHSNNIGKATTLFDEMIKEGVS 271
+GAFLH+NN+G A LF EM+ EG S
Sbjct: 325 VGAFLHTNNVGVAMELFHEMVDEGNS 350
>ref|XP_004965136.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Setaria italica]
Length = 602
Score = 112 bits (280), Expect = 5e-23
Identities = 52/88 (59%), Positives = 66/88 (75%)
Frame = +2
Query: 2 ELDKAHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVT 181
++ A E++ RMEKE VA NV+T+NT V G+CR G +G ALDFFR+K+ WPE +GNAVT
Sbjct: 262 DVGMACEVVGRMEKEGVAPNVITVNTIVGGLCRVGRVGAALDFFREKRAAWPETRGNAVT 321
Query: 182 YSTLIGAFLHSNNIGKATTLFDEMIKEG 265
YSTL+ AFLH NN+G A LF EM +G
Sbjct: 322 YSTLVSAFLHCNNVGMAMELFHEMADQG 349
>dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 110 bits (274), Expect = 3e-22
Identities = 52/89 (58%), Positives = 65/89 (73%)
Frame = +2
Query: 5 LDKAHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVTY 184
+ A+EL+ +ME E V N+VTLNT V G+CR G G AL+FFR+K+ WPE KGNAVTY
Sbjct: 262 ISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTY 321
Query: 185 STLIGAFLHSNNIGKATTLFDEMIKEGVS 271
STL+GA LH+NN+G A LF E + EG S
Sbjct: 322 STLVGALLHTNNVGMAMELFHEKMSEGHS 350
>ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa
Japonica Group]
Length = 690
Score = 110 bits (274), Expect = 3e-22
Identities = 52/89 (58%), Positives = 65/89 (73%)
Frame = +2
Query: 5 LDKAHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVTY 184
+ A+EL+ +ME E V N+VTLNT V G+CR G G AL+FFR+K+ WPE KGNAVTY
Sbjct: 262 ISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTY 321
Query: 185 STLIGAFLHSNNIGKATTLFDEMIKEGVS 271
STL+GA LH+NN+G A LF E + EG S
Sbjct: 322 STLVGALLHTNNVGMAMELFHEKMSEGHS 350
>gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 110 bits (274), Expect = 3e-22
Identities = 52/89 (58%), Positives = 65/89 (73%)
Frame = +2
Query: 5 LDKAHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVTY 184
+ A+EL+ +ME E V N+VTLNT V G+CR G G AL+FFR+K+ WPE KGNAVTY
Sbjct: 262 ISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTY 321
Query: 185 STLIGAFLHSNNIGKATTLFDEMIKEGVS 271
STL+GA LH+NN+G A LF E + EG S
Sbjct: 322 STLVGALLHTNNVGMAMELFHEKMSEGHS 350
>ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein
SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 107 bits (267), Expect = 2e-21
Identities = 49/88 (55%), Positives = 64/88 (72%)
Frame = +2
Query: 2 ELDKAHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVT 181
++D A +++ RMEKE V NV+T+NT V G+CR G +G ALDFFR+K+ W E +GNAVT
Sbjct: 255 DIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVT 314
Query: 182 YSTLIGAFLHSNNIGKATTLFDEMIKEG 265
YSTL+ AFLH NN+ A LF EM +G
Sbjct: 315 YSTLVSAFLHCNNVALAMELFHEMADQG 342
>gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 105 bits (262), Expect = 6e-21
Identities = 48/88 (54%), Positives = 63/88 (71%)
Frame = +2
Query: 2 ELDKAHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVT 181
++ A +++ RMEKE VA NV+T+NT + G+CR G +G AL+FFR+K+ WPE +GNAVT
Sbjct: 255 DIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVT 314
Query: 182 YSTLIGAFLHSNNIGKATTLFDEMIKEG 265
YSTL AFLH NN+ A LF EM G
Sbjct: 315 YSTLASAFLHCNNVDMAMELFHEMADHG 342
>gb|EOX95861.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 764
Score = 94.4 bits (233), Expect = 1e-17
Identities = 46/90 (51%), Positives = 65/90 (72%)
Frame = +2
Query: 2 ELDKAHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVT 181
E+++ EL RM++E V+ NV+TLNT V+GMCRHG +AL+FF ++ +KGNAVT
Sbjct: 430 EIERGKELYDRMKEEGVSPNVITLNTLVDGMCRHGRTSSALEFF--NDMQGKGLKGNAVT 487
Query: 182 YSTLIGAFLHSNNIGKATTLFDEMIKEGVS 271
Y+TLI AF + NNI KA LFD++++ G S
Sbjct: 488 YTTLISAFCNVNNIDKAVDLFDQLLRSGCS 517
>gb|AGZ20103.1| pentatricopeptide repeat-containing protein [Camellia sinensis]
Length = 771
Score = 93.6 bits (231), Expect = 2e-17
Identities = 46/86 (53%), Positives = 63/86 (73%)
Frame = +2
Query: 2 ELDKAHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVT 181
E+ +AHEL +M KE V NV+TLNT V+GMC+HG I +A++FF +++ +KGNAVT
Sbjct: 437 EIGRAHELFDQMNKEGVPPNVITLNTLVDGMCKHGRINSAMEFF--NEMQGKGLKGNAVT 494
Query: 182 YSTLIGAFLHSNNIGKATTLFDEMIK 259
Y+ LI AF ++NNI KA LF+EM K
Sbjct: 495 YTALINAFCNANNIDKAMQLFNEMSK 520
>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product
[Vitis vinifera]
Length = 765
Score = 89.7 bits (221), Expect = 4e-16
Identities = 46/89 (51%), Positives = 62/89 (69%)
Frame = +2
Query: 5 LDKAHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVTY 184
++ A EL +M K+ V NVVTLNT V+GMC+HG I A++FF +++ +KGNAVTY
Sbjct: 432 IEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFF--NEMQGKGLKGNAVTY 489
Query: 185 STLIGAFLHSNNIGKATTLFDEMIKEGVS 271
+ LI AF + NNI KA LFDEM++ G S
Sbjct: 490 TALIRAFCNVNNIEKAMELFDEMLEAGCS 518
Score = 55.5 bits (132), Expect = 7e-06
Identities = 28/89 (31%), Positives = 52/89 (58%)
Frame = +2
Query: 2 ELDKAHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVT 181
+LD+A +L++M++ + ++V+ N +NG CR + A + K++E +K + VT
Sbjct: 536 KLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEML--KEMENAGIKPDGVT 593
Query: 182 YSTLIGAFLHSNNIGKATTLFDEMIKEGV 268
Y+TLI F + + A L +M+KEG+
Sbjct: 594 YNTLISHFSKTGDFSTAHRLMKKMVKEGL 622
>gb|EMS48434.1| hypothetical protein TRIUR3_02205 [Triticum urartu]
Length = 444
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +2
Query: 14 AHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVTYSTL 193
A E++ RME+E ++ +V TLN V +CR G + AL+FFR+K+ WPE +GNAVTYSTL
Sbjct: 110 ACEVVGRMEREGLSPDVFTLNMIVAALCRAGRVWAALEFFREKRTTWPEARGNAVTYSTL 169
Query: 194 IGAFLHSNNIGKATTLFDEMIKEG 265
+ A L + N+ A LF EM +EG
Sbjct: 170 VQALLRTKNVDVAMKLFHEMTEEG 193
>gb|ESW32485.1| hypothetical protein PHAVU_002G326200g [Phaseolus vulgaris]
Length = 760
Score = 87.4 bits (215), Expect = 2e-15
Identities = 45/89 (50%), Positives = 61/89 (68%)
Frame = +2
Query: 5 LDKAHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVTY 184
+ KA EL ++M +E V +VVTLNT VNG+C+HG + NA++FF + K + +KGNAVTY
Sbjct: 419 IGKARELYSQMIEEGVQPSVVTLNTMVNGLCKHGKVHNAVEFFNEMKGK--GLKGNAVTY 476
Query: 185 STLIGAFLHSNNIGKATTLFDEMIKEGVS 271
+ LI AF NNI KA FD+M+ G S
Sbjct: 477 TALISAFCGVNNIDKAMQYFDDMLSSGCS 505
>ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 86.7 bits (213), Expect = 3e-15
Identities = 42/88 (47%), Positives = 59/88 (67%)
Frame = +2
Query: 8 DKAHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVTYS 187
D+AHEL +M +E V NV+TLNT V+G+C+HG + A++FF + K + +KGNA TY+
Sbjct: 410 DRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGK--GLKGNAATYT 467
Query: 188 TLIGAFLHSNNIGKATTLFDEMIKEGVS 271
LI AF NNI +A F+EM+ G S
Sbjct: 468 ALISAFCGVNNINRAMQCFEEMLSSGCS 495
>ref|XP_002320827.2| pentatricopeptide repeat-containing family protein, partial
[Populus trichocarpa] gi|550323783|gb|EEE99142.2|
pentatricopeptide repeat-containing family protein,
partial [Populus trichocarpa]
Length = 720
Score = 85.5 bits (210), Expect = 7e-15
Identities = 45/90 (50%), Positives = 60/90 (66%)
Frame = +2
Query: 2 ELDKAHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVT 181
E++K EL M KE VA NVVT+NT V GMCR G + +A++FF + + +KG+AVT
Sbjct: 391 EIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFF--VEAQRRGMKGDAVT 448
Query: 182 YSTLIGAFLHSNNIGKATTLFDEMIKEGVS 271
Y+ LI AF + NN KA LF+EM+K G S
Sbjct: 449 YTALINAFCNVNNFEKAMELFNEMLKSGCS 478
>ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/88 (45%), Positives = 57/88 (64%)
Frame = +2
Query: 2 ELDKAHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVT 181
E++ AH+L ME ++ NV+TLNT V+GMC+H I A++FFR ++ +KGN VT
Sbjct: 278 EIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFR--VMQQKGLKGNNVT 335
Query: 182 YSTLIGAFLHSNNIGKATTLFDEMIKEG 265
Y+ I AF + NN+ KA DEM K+G
Sbjct: 336 YTVFINAFCNVNNMNKAMEFLDEMSKDG 363
>ref|XP_004308336.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 883
Score = 82.8 bits (203), Expect = 4e-14
Identities = 39/85 (45%), Positives = 62/85 (72%)
Frame = +2
Query: 2 ELDKAHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVT 181
++D+ EL +M++E + +NVVTLNT ++G+CRHG + AL+FF K+++ +KGNAV+
Sbjct: 398 DIDRGLELFEKMKEEGIPLNVVTLNTLLDGLCRHGRLNAALEFF--KEMQRDGLKGNAVS 455
Query: 182 YSTLIGAFLHSNNIGKATTLFDEMI 256
Y+ LI +F NNI KA LF++M+
Sbjct: 456 YTLLISSFCDVNNISKAMELFNQML 480
>gb|EMT24346.1| hypothetical protein F775_12218 [Aegilops tauschii]
Length = 444
Score = 82.0 bits (201), Expect = 7e-14
Identities = 40/80 (50%), Positives = 55/80 (68%)
Frame = +2
Query: 14 AHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVTYSTL 193
A E++ RME+E ++ +V TLN V +CR G + AL+FFR+K+ WPE +GNAVTYSTL
Sbjct: 110 ACEVIGRMEREGLSPDVFTLNMIVVALCRVGRVWAALEFFREKRTIWPEARGNAVTYSTL 169
Query: 194 IGAFLHSNNIGKATTLFDEM 253
+ A L + N+ A LF EM
Sbjct: 170 VQALLSTKNVDVAMELFHEM 189
>ref|XP_004503311.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like isoform X2 [Cicer arietinum]
Length = 643
Score = 80.9 bits (198), Expect = 2e-13
Identities = 44/89 (49%), Positives = 57/89 (64%)
Frame = +2
Query: 5 LDKAHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVTY 184
+DKA EL M +E V NVVTLNT V GMC+ G + +A++F + K + +KGNAVTY
Sbjct: 298 IDKARELFGLMNEEGVQPNVVTLNTLVGGMCKIGRVYSAVEFLNEMKGK--GLKGNAVTY 355
Query: 185 STLIGAFLHSNNIGKATTLFDEMIKEGVS 271
+ LI AF NNI +A FDEM+ G S
Sbjct: 356 TALISAFCGVNNIDQAMQYFDEMLSSGCS 384
>ref|XP_004503310.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like isoform X1 [Cicer arietinum]
Length = 776
Score = 80.9 bits (198), Expect = 2e-13
Identities = 44/89 (49%), Positives = 57/89 (64%)
Frame = +2
Query: 5 LDKAHELLTRMEKERVAVNVVTLNTFVNGMCRHGMIGNALDFFRKKKVEWPEVKGNAVTY 184
+DKA EL M +E V NVVTLNT V GMC+ G + +A++F + K + +KGNAVTY
Sbjct: 431 IDKARELFGLMNEEGVQPNVVTLNTLVGGMCKIGRVYSAVEFLNEMKGK--GLKGNAVTY 488
Query: 185 STLIGAFLHSNNIGKATTLFDEMIKEGVS 271
+ LI AF NNI +A FDEM+ G S
Sbjct: 489 TALISAFCGVNNIDQAMQYFDEMLSSGCS 517