BLASTX nr result
ID: Zingiber24_contig00027585
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00027585
(812 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003567835.1| PREDICTED: zinc finger CCCH domain-containin... 193 5e-47
gb|EXC20328.1| Zinc finger CCCH domain-containing protein 41 [Mo... 193 7e-47
ref|XP_004975433.1| PREDICTED: zinc finger CCCH domain-containin... 192 9e-47
gb|EMJ18263.1| hypothetical protein PRUPE_ppa001047mg [Prunus pe... 192 2e-46
ref|XP_002447715.1| hypothetical protein SORBIDRAFT_06g014350 [S... 192 2e-46
sp|Q0JDM0.2|C3H27_ORYSJ RecName: Full=Zinc finger CCCH domain-co... 185 1e-44
emb|CAH66461.1| H0718E12.5 [Oryza sativa Indica Group] 185 1e-44
ref|NP_001052653.1| Os04g0394300 [Oryza sativa Japonica Group] g... 185 1e-44
emb|CAD40551.1| OSJNBa0072K14.6 [Oryza sativa Japonica Group] 185 1e-44
ref|XP_006652220.1| PREDICTED: zinc finger CCCH domain-containin... 183 7e-44
ref|XP_002300018.2| RNA recognition motif-containing family prot... 182 1e-43
ref|XP_003554702.1| PREDICTED: zinc finger CCCH domain-containin... 182 1e-43
ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containin... 181 3e-43
ref|XP_003524556.1| PREDICTED: zinc finger CCCH domain-containin... 180 6e-43
gb|EMT09223.1| Zinc finger CCCH domain-containing protein 27 [Ae... 179 1e-42
gb|EMS47346.1| Zinc finger CCCH domain-containing protein 27 [Tr... 179 1e-42
gb|EOY02483.1| Zinc finger family protein / RNA recognition moti... 176 7e-42
ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis] ... 174 3e-41
dbj|BAJ91502.1| predicted protein [Hordeum vulgare subsp. vulgare] 171 3e-40
ref|XP_002324006.1| hypothetical protein POPTR_0017s10830g [Popu... 170 5e-40
>ref|XP_003567835.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
[Brachypodium distachyon]
Length = 923
Score = 193 bits (491), Expect = 5e-47
Identities = 127/288 (44%), Positives = 159/288 (55%), Gaps = 18/288 (6%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
MP QRCRDF+E+G+CLRGDMCPMEHGV+RIVVED+QSLSQFNL VS N+ PG+ G +
Sbjct: 228 MPRQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDMQSLSQFNLPVSVPNA--PGL--GIQ 283
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLNVVSSSSGLVEADVYDPDQPLWNNG 453
SK VPAKD K + +D+LKLN ++S + +ADVYDPDQPLWNN
Sbjct: 284 NEAGTAHVNLTNLGGSKGVPAKDIKSGVTDDALKLN-GGTTSAVADADVYDPDQPLWNNE 342
Query: 452 CQGTSEPTLMLSLENNDEPVWNXXXXXXXXXXXQIGHSSRSEMGIISINNALPTNLLSNE 273
S + ++ VWN +E S+ + + S
Sbjct: 343 QPEASS----AGFAHTNDGVWNAETSSHEAGWKHANQGFAAENSKSSVWGRIASKRKSGP 398
Query: 272 MKVDKENSIVKASATVPEKQF-------TTEKSQKPTTNHHNSTSNS------GRM---- 144
K + + SAT +K +T + +T N SNS GR
Sbjct: 399 ---GKTANTISTSATENQKSDYYDDMAPSTVQVNPASTKDTNGQSNSRIFGDVGRQSNQA 455
Query: 143 -SQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFV 3
S KASRTLYV+GIPQ+ N DALLSHFQKFG V+DIYIP NSEKAF+
Sbjct: 456 SSNKASRTLYVNGIPQESNRWDALLSHFQKFGQVIDIYIPSNSEKAFI 503
>gb|EXC20328.1| Zinc finger CCCH domain-containing protein 41 [Morus notabilis]
Length = 930
Score = 193 bits (490), Expect = 7e-47
Identities = 125/295 (42%), Positives = 164/295 (55%), Gaps = 25/295 (8%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
+P QRCRDF+E+G+CLRGD+CPMEHGV+RIV+EDVQSLSQFNL VS ++H+ G +G
Sbjct: 222 IPRQRCRDFEERGFCLRGDICPMEHGVNRIVIEDVQSLSQFNLPVSLPSAHLLGTTSGPG 281
Query: 632 XXXXXXXXXXXXXXXS-KFVPAKDGKPLLPEDSLKLNVVSSSSGLVE-ADVYDPDQPLWN 459
+ K + +K KP +D L LN S SG V AD+YDPDQPLWN
Sbjct: 282 PGSLAAISSSSTTSLNNKGLHSKTSKPGFADDGLGLNGSYSGSGCVTGADLYDPDQPLWN 341
Query: 458 NGCQGTSEPTLML---------SLENND-------EPVWNXXXXXXXXXXXQIGHSSRSE 327
N C TS L L SL N D N +IG SS+S
Sbjct: 342 NNCPETSNALLALNPSKIDETESLMNGDPSDNFQLRSSGNAVGSHSTSVWGRIG-SSKSR 400
Query: 326 MGIISINNAL--PTNLLSNEMKVDKENSIVKASATVPEKQFTTEKSQKPTTNHHNSTS-- 159
+ + ++A ++ + N+ K DK S ++ KQ E + + T
Sbjct: 401 LDVKEKSDAAISSSDYIENDSKEDKVASAGIPISSRQGKQIVAEDAGPKPLDSSEKTQVD 460
Query: 158 ---NSGRMSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFV 3
N+ + SQKA RTL+V+GIP K N R+ALLSHFQKFG+V+DIYIP N+E+AFV
Sbjct: 461 TMRNNRKPSQKALRTLFVNGIPLKSNKREALLSHFQKFGEVIDIYIPMNTERAFV 515
>ref|XP_004975433.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
[Setaria italica]
Length = 900
Score = 192 bits (489), Expect = 9e-47
Identities = 126/299 (42%), Positives = 157/299 (52%), Gaps = 29/299 (9%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
+P QRCRDF+E+G+CLRGDMCPMEHGV+RIVV+D+QSLSQFNL VS N+ GIQ
Sbjct: 222 LPRQRCRDFEERGFCLRGDMCPMEHGVNRIVVDDMQSLSQFNLPVSVPNTQGLGIQ---- 277
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLNVVSSSSGLVEADVYDPDQPLWNNG 453
SK VPAK+ K + D++KLN S++S + +ADVYDPDQPLWNN
Sbjct: 278 -------NEGGTGSVSKSVPAKEVKSGVASDAVKLN-GSTTSAVADADVYDPDQPLWNNE 329
Query: 452 CQGTSEPTLMLSLENNDEPVWNXXXXXXXXXXXQIGHSSRSEMGIISINNALPT------ 291
S + D +WN SS EMG N T
Sbjct: 330 HPEAS----CAGFVHTDAGMWNP-------------ESSGYEMGQEHSNQVFATDGSQGL 372
Query: 290 -------------NLLSNEMKVDKENSIVKASATVPEKQFTTEKSQKPTTNHHNSTSN-- 156
+ SN K+ ++ + E +T +S+ N SN
Sbjct: 373 KSSVWGRIASKRKSGTSNTAKITSTSTTGNQKSDYDEMAPSTAQSKSAAAKDTNGQSNSR 432
Query: 155 --------SGRMSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFV 3
S R + KASRTLYVHGIPQ++N +ALLSHFQKFG V+DIYIP NSEKAFV
Sbjct: 433 IYGDVGRQSNRAAHKASRTLYVHGIPQENNRWEALLSHFQKFGQVIDIYIPSNSEKAFV 491
>gb|EMJ18263.1| hypothetical protein PRUPE_ppa001047mg [Prunus persica]
Length = 924
Score = 192 bits (487), Expect = 2e-46
Identities = 125/293 (42%), Positives = 158/293 (53%), Gaps = 23/293 (7%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
+P QRCRDF+E+G+CLRGDMCPMEHGV+RIVVEDVQSLSQFNL VS ++H+ G G
Sbjct: 224 IPRQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVS--SAHLLGKPTGP- 280
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLNVVSSSSG-LVEADVYDPDQPLWNN 456
SK + K K + +D L LN S G L AD+YDPDQPLWNN
Sbjct: 281 GSLPSVSASSAALMNSKGLHGKTSKSAVNDDGLGLNGPYSGPGYLGGADLYDPDQPLWNN 340
Query: 455 GCQGTSEPTLMLSLENNDEPVWNXXXXXXXXXXXQIGHSSRSEMGIISINNAL------- 297
TS L L NDE +G ++ S+ +S+ +
Sbjct: 341 NGPETSNALLGLQSPRNDETESLLDSADNECPIRSVGTAANSQSTSVSVWGRIGSSKSKL 400
Query: 296 -------PTN----LLSNEMKVDKENSIVKASATVPEKQFTTEKSQKPTTN----HHNST 162
PTN + +E K KE + + K+ E K + H + T
Sbjct: 401 DVKEKIDPTNNSSDCIESETKEGKEALVSIQNPPRQGKRIMAEDGPKAVDSSPKTHFDPT 460
Query: 161 SNSGRMSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFV 3
N + SQKA RTL+V+GIPQK N R+ALLSHFQKFG+V+DIYIP NSE+AFV
Sbjct: 461 RNIRKPSQKALRTLFVNGIPQKSNKREALLSHFQKFGEVIDIYIPLNSERAFV 513
>ref|XP_002447715.1| hypothetical protein SORBIDRAFT_06g014350 [Sorghum bicolor]
gi|241938898|gb|EES12043.1| hypothetical protein
SORBIDRAFT_06g014350 [Sorghum bicolor]
Length = 918
Score = 192 bits (487), Expect = 2e-46
Identities = 128/298 (42%), Positives = 156/298 (52%), Gaps = 28/298 (9%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
MP QRCRDF+E+G+CLRGDMCPMEHGV+RIVV+D+QSLSQFNL VS N+ GIQ
Sbjct: 224 MPRQRCRDFEERGFCLRGDMCPMEHGVNRIVVDDMQSLSQFNLPVSVPNAQGLGIQ---- 279
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLNVVSSSSGLVEADVYDPDQPLWNNG 453
SK VP KD K + D+LK N S+ S + +ADVYDPDQPLWNN
Sbjct: 280 NEGGASSVNLSSLGGSKSVPVKDVKSGVASDALKPN-GSAVSAVADADVYDPDQPLWNNE 338
Query: 452 CQGTSEPTLMLSLENNDEPVWNXXXXXXXXXXXQIGHSSRSEMGIISINNALPTN----- 288
S + D VWN SS EMG N ++
Sbjct: 339 HPEAS----CTGFVHKDVGVWN-------------AESSGYEMGQEHSNQVFASDGSQSL 381
Query: 287 ------LLSNEMKVDKENSIVKASATVPEKQFT-----------TEKSQKPTTNHHNST- 162
++++ K N+ S ++ Q + + + K T NS
Sbjct: 382 KSSVWGRIASKRKPGGSNTAKSTSTSITGNQKSDYDEMTLSMGQVKSAAKDTNGQPNSRI 441
Query: 161 -----SNSGRMSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFV 3
S R +QKASRTLYVHGIPQ+ N DALLSHFQKFG V+DIYIP NSEKAFV
Sbjct: 442 YGDVGRQSNRAAQKASRTLYVHGIPQESNRWDALLSHFQKFGQVIDIYIPSNSEKAFV 499
>sp|Q0JDM0.2|C3H27_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 27;
Short=OsC3H27 gi|215767208|dbj|BAG99436.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 903
Score = 185 bits (470), Expect = 1e-44
Identities = 124/296 (41%), Positives = 160/296 (54%), Gaps = 26/296 (8%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
MP QRCRDF+E+G+CLRGDMCPMEHG++RIVVED+QSLSQFNL V+ N+ GIQ
Sbjct: 226 MPRQRCRDFEERGFCLRGDMCPMEHGLNRIVVEDMQSLSQFNLPVTVPNTQGLGIQ---- 281
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLNVVSSSSGLVEADVYDPDQPLWNNG 453
SK VPAKD K + D LKLN +++ + +ADVYDPDQPLWNN
Sbjct: 282 NEPGTAPVNTSSLGGSKGVPAKDIKSAVTNDVLKLN-GTTALAVSDADVYDPDQPLWNN- 339
Query: 452 CQGTSEPTLMLSLENNDEPVWNXXXXXXXXXXXQIGHSSRSEMG--IISINNALPT---- 291
P + D VWN +G+ + E G +++ +++ +
Sbjct: 340 ----EHPDASAGFAHTD-GVWN---------AESLGYEAAREQGNQVLAADSSQNSKSSV 385
Query: 290 --NLLSNEMKVDKENSIVKASATVPEKQFTTEKSQKPTTNHHNSTS-------------- 159
+ S ++ K + SAT K+ + P+T H N S
Sbjct: 386 WGRIASKKLGHGKTANATSTSAT-GNKRNESYDEMAPSTVHVNPASAKDSNGQSNSRIFG 444
Query: 158 ----NSGRMSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFV 3
S R S KASRTLYV+GIP + N +ALLSHFQKFG V+DIYIP NSEKAFV
Sbjct: 445 DVGRQSNRASHKASRTLYVNGIPLESNRWEALLSHFQKFGQVIDIYIPSNSEKAFV 500
>emb|CAH66461.1| H0718E12.5 [Oryza sativa Indica Group]
Length = 904
Score = 185 bits (470), Expect = 1e-44
Identities = 124/296 (41%), Positives = 160/296 (54%), Gaps = 26/296 (8%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
MP QRCRDF+E+G+CLRGDMCPMEHG++RIVVED+QSLSQFNL V+ N+ GIQ
Sbjct: 226 MPRQRCRDFEERGFCLRGDMCPMEHGLNRIVVEDMQSLSQFNLPVTVPNTQGLGIQ---- 281
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLNVVSSSSGLVEADVYDPDQPLWNNG 453
SK VPAKD K + D LKLN +++ + +ADVYDPDQPLWNN
Sbjct: 282 NEPGTAPVNTSSLGGSKGVPAKDIKSAVTNDVLKLN-GTTALAVSDADVYDPDQPLWNN- 339
Query: 452 CQGTSEPTLMLSLENNDEPVWNXXXXXXXXXXXQIGHSSRSEMG--IISINNALPT---- 291
P + D VWN +G+ + E G +++ +++ +
Sbjct: 340 ----EHPDASAGFAHTD-GVWN---------AESLGYEAAREQGNQVLAADSSQNSKSSV 385
Query: 290 --NLLSNEMKVDKENSIVKASATVPEKQFTTEKSQKPTTNHHNSTS-------------- 159
+ S ++ K + SAT K+ + P+T H N S
Sbjct: 386 WGRIASKKLGHGKTANATSTSAT-GNKRNESYDEMAPSTVHVNPASAKDSNGQSNSRIFG 444
Query: 158 ----NSGRMSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFV 3
S R S KASRTLYV+GIP + N +ALLSHFQKFG V+DIYIP NSEKAFV
Sbjct: 445 DVGRQSNRASHKASRTLYVNGIPLESNRWEALLSHFQKFGQVIDIYIPSNSEKAFV 500
>ref|NP_001052653.1| Os04g0394300 [Oryza sativa Japonica Group]
gi|113564224|dbj|BAF14567.1| Os04g0394300, partial [Oryza
sativa Japonica Group]
Length = 917
Score = 185 bits (470), Expect = 1e-44
Identities = 124/296 (41%), Positives = 160/296 (54%), Gaps = 26/296 (8%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
MP QRCRDF+E+G+CLRGDMCPMEHG++RIVVED+QSLSQFNL V+ N+ GIQ
Sbjct: 240 MPRQRCRDFEERGFCLRGDMCPMEHGLNRIVVEDMQSLSQFNLPVTVPNTQGLGIQ---- 295
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLNVVSSSSGLVEADVYDPDQPLWNNG 453
SK VPAKD K + D LKLN +++ + +ADVYDPDQPLWNN
Sbjct: 296 NEPGTAPVNTSSLGGSKGVPAKDIKSAVTNDVLKLN-GTTALAVSDADVYDPDQPLWNN- 353
Query: 452 CQGTSEPTLMLSLENNDEPVWNXXXXXXXXXXXQIGHSSRSEMG--IISINNALPT---- 291
P + D VWN +G+ + E G +++ +++ +
Sbjct: 354 ----EHPDASAGFAHTD-GVWN---------AESLGYEAAREQGNQVLAADSSQNSKSSV 399
Query: 290 --NLLSNEMKVDKENSIVKASATVPEKQFTTEKSQKPTTNHHNSTS-------------- 159
+ S ++ K + SAT K+ + P+T H N S
Sbjct: 400 WGRIASKKLGHGKTANATSTSAT-GNKRNESYDEMAPSTVHVNPASAKDSNGQSNSRIFG 458
Query: 158 ----NSGRMSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFV 3
S R S KASRTLYV+GIP + N +ALLSHFQKFG V+DIYIP NSEKAFV
Sbjct: 459 DVGRQSNRASHKASRTLYVNGIPLESNRWEALLSHFQKFGQVIDIYIPSNSEKAFV 514
>emb|CAD40551.1| OSJNBa0072K14.6 [Oryza sativa Japonica Group]
Length = 915
Score = 185 bits (470), Expect = 1e-44
Identities = 124/296 (41%), Positives = 160/296 (54%), Gaps = 26/296 (8%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
MP QRCRDF+E+G+CLRGDMCPMEHG++RIVVED+QSLSQFNL V+ N+ GIQ
Sbjct: 238 MPRQRCRDFEERGFCLRGDMCPMEHGLNRIVVEDMQSLSQFNLPVTVPNTQGLGIQ---- 293
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLNVVSSSSGLVEADVYDPDQPLWNNG 453
SK VPAKD K + D LKLN +++ + +ADVYDPDQPLWNN
Sbjct: 294 NEPGTAPVNTSSLGGSKGVPAKDIKSAVTNDVLKLN-GTTALAVSDADVYDPDQPLWNN- 351
Query: 452 CQGTSEPTLMLSLENNDEPVWNXXXXXXXXXXXQIGHSSRSEMG--IISINNALPT---- 291
P + D VWN +G+ + E G +++ +++ +
Sbjct: 352 ----EHPDASAGFAHTD-GVWN---------AESLGYEAAREQGNQVLAADSSQNSKSSV 397
Query: 290 --NLLSNEMKVDKENSIVKASATVPEKQFTTEKSQKPTTNHHNSTS-------------- 159
+ S ++ K + SAT K+ + P+T H N S
Sbjct: 398 WGRIASKKLGHGKTANATSTSAT-GNKRNESYDEMAPSTVHVNPASAKDSNGQSNSRIFG 456
Query: 158 ----NSGRMSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFV 3
S R S KASRTLYV+GIP + N +ALLSHFQKFG V+DIYIP NSEKAFV
Sbjct: 457 DVGRQSNRASHKASRTLYVNGIPLESNRWEALLSHFQKFGQVIDIYIPSNSEKAFV 512
>ref|XP_006652220.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like [Oryza
brachyantha]
Length = 929
Score = 183 bits (464), Expect = 7e-44
Identities = 123/289 (42%), Positives = 149/289 (51%), Gaps = 19/289 (6%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
MP QRCRDF+E+G+CLRGDMCPMEHG++RIVVED+QSLSQFNL V+ N+ GIQ
Sbjct: 227 MPRQRCRDFEERGFCLRGDMCPMEHGLNRIVVEDMQSLSQFNLPVAVPNTQGLGIQ---- 282
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLN-VVSSSSGLVEADVYDPDQPLWNN 456
SK VPAKD K + D LKLN +S+ + +ADVYDPDQPLWN
Sbjct: 283 NEAGAAPVNTSSLGGSKGVPAKDIKSGVTNDVLKLNGTTTSAVSVSDADVYDPDQPLWN- 341
Query: 455 GCQGTSEPTLMLSLENNDEPVWN---------XXXXXXXXXXXQIGHSSRSEMGIISINN 303
+ P + +++ VWN +S S G I+
Sbjct: 342 ----SEHPDASCAGFAHNDGVWNAESSGYEAVREQGNQVFAADSSQNSKSSVWGRIASKK 397
Query: 302 ALP---TNLLSNEMKVDKENSIVKASATVPEKQFTTEKSQKPTTNHHNST------SNSG 150
P N S +K N P S K T NS S
Sbjct: 398 QGPGKTANATSTSATGNKRNE--SYDEMTPSTVHVNPASAKDTNGQSNSRIFGDMGRQSN 455
Query: 149 RMSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFV 3
R S KASRTLYV+GIP + N +ALLSHFQKFG V+DIYIP NSEKAF+
Sbjct: 456 RASHKASRTLYVNGIPLESNRWEALLSHFQKFGQVIDIYIPSNSEKAFI 504
>ref|XP_002300018.2| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|550348869|gb|EEE84823.2| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 981
Score = 182 bits (462), Expect = 1e-43
Identities = 120/308 (38%), Positives = 165/308 (53%), Gaps = 38/308 (12%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
+PHQRCRDF+E+G+CLRGDMCP+EHGV+RIVVEDVQSLSQFNL VS + +PG +G
Sbjct: 224 IPHQRCRDFEERGFCLRGDMCPLEHGVNRIVVEDVQSLSQFNLPVSLPRAQLPGTTSG-L 282
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLN-VVSSSSGLVEADVYDPDQPLWNN 456
SK + K KP + +D L LN + S + D+YDPDQPLWN+
Sbjct: 283 GAVPTVGAPPATLMNSKGMHGKSNKPGIVDDGLGLNGAYTGSVSVSGGDLYDPDQPLWND 342
Query: 455 GCQGTSEPTL------------MLSLENND-------EPVWNXXXXXXXXXXXQIGHSSR 333
TS L M+S++ +D + N +
Sbjct: 343 NGPETSSTLLAPHSPKFDETESMISVDPSDHNHARLRDGADNECPIRSTGIAVGFQGMNS 402
Query: 332 SEMGII-SINNALP-----------TNLLSNEMKVDKENSIVKASATVPEKQFT------ 207
S G I S+NN L ++ + +E K D + ++ T + + T
Sbjct: 403 SVWGRIGSLNNRLDVKEKIDSTVSMSSYMESESKED-QGALDNVHGTSHQGKCTNFDDCG 461
Query: 206 TEKSQKPTTNHHNSTSNSGRMSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIP 27
T+ P H ++ ++ ++SQKA RTL+V+GIP K N RDALLSHFQKFG+V+DIYIP
Sbjct: 462 TKTMDSPAKIHSDTMRHTRKLSQKALRTLFVNGIPHKSNKRDALLSHFQKFGEVIDIYIP 521
Query: 26 QNSEKAFV 3
NSE+AF+
Sbjct: 522 LNSERAFI 529
>ref|XP_003554702.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like isoform
X1 [Glycine max] gi|571553148|ref|XP_006603780.1|
PREDICTED: zinc finger CCCH domain-containing protein
41-like isoform X2 [Glycine max]
gi|571553154|ref|XP_006603781.1| PREDICTED: zinc finger
CCCH domain-containing protein 41-like isoform X3
[Glycine max] gi|571553158|ref|XP_006603782.1| PREDICTED:
zinc finger CCCH domain-containing protein 41-like
isoform X4 [Glycine max]
Length = 945
Score = 182 bits (462), Expect = 1e-43
Identities = 118/297 (39%), Positives = 160/297 (53%), Gaps = 27/297 (9%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
+P QRCRDF+E+G+CLRGDMCPMEHGV+RIV+EDVQSLSQFNL VS ++H+ G AG
Sbjct: 227 IPRQRCRDFEERGFCLRGDMCPMEHGVNRIVIEDVQSLSQFNLPVSLPSAHLIGAPAGS- 285
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLNVVSSSSGLVE-ADVYDPDQPLWNN 456
+K +P K K ++ +D L L+ V + G AD+YDPDQPLWN+
Sbjct: 286 -GPLHSVNASTTLMNNKCLPGKISKSVVNDDGLPLDGVYTGPGCTSGADLYDPDQPLWND 344
Query: 455 GCQGTSEPTLMLSLE----------NNDEPVWNXXXXXXXXXXXQIGHSSRSEMGIISIN 306
C G +L+L+ +ND P + G SS I S
Sbjct: 345 -C-GLESSNALLTLQSSKIDESEPISNDAPDSDCPVGTARTSVSSQGTSSSVWARIGSSK 402
Query: 305 NALPT-----------NLLSNEMKVDKENSIVKASATVPEKQFTTEKSQKPTTN-----H 174
N N N++K D + + +A+ KQ + +
Sbjct: 403 NRFDMKEKTNSTMSSFNYPENQLKEDNDELVSAHNASFQVKQSIADDADPKALEASLKAQ 462
Query: 173 HNSTSNSGRMSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFV 3
+S N + SQKA TL+V+GIPQK+N R+ALL+HF+KFG+V+DIYIP NSE+AFV
Sbjct: 463 TDSMRNIRKSSQKALCTLFVNGIPQKNNKREALLAHFKKFGEVIDIYIPLNSERAFV 519
>ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containing protein 41-like [Vitis
vinifera]
Length = 948
Score = 181 bits (459), Expect = 3e-43
Identities = 123/309 (39%), Positives = 161/309 (52%), Gaps = 39/309 (12%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
+P QRCRDF+E+G+CLRGDMCPMEHGV+RIVVEDVQSLSQFNL VS ++H+ G AG
Sbjct: 226 IPRQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSLPSAHLLGTPAGPG 285
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLNVVSSSSGL-VEADVYDPDQPLWNN 456
F K GKP + ED L LN S S + A++YDPDQPLWNN
Sbjct: 286 PLPSVNAPPSTLMNSKGF-QNKSGKPEVAEDELGLNGAFSGSAVGGGAELYDPDQPLWNN 344
Query: 455 GCQGTSEPTLMLSL---------------------------ENNDEPVWN-----XXXXX 372
C T P+ +L+L +N PV N
Sbjct: 345 DCPET--PSALLALHSPKIDETECLLDANSSDRYHARLCDGSDNGRPVKNTGTTVGSQST 402
Query: 371 XXXXXXQIGHSSRSEMGIISINNAL-PTNLLSNEMKVDKENSIVKASATVPEKQFTTEKS 195
+IG + I++ + ++ L NE K D+E + K+ E
Sbjct: 403 NVSVWGRIGGAKDRLEAKEKIDSVISSSDYLENEGKEDQEALTSVQGTSRQGKRIIVEDI 462
Query: 194 QKPTTNHHNSTS-----NSGRMSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYI 30
+ + T N + SQKA RTL+V+GIPQK+N ++ALLSHF+KFG+V+DIYI
Sbjct: 463 GSKNVDLSSRTQSDAMRNIRKPSQKALRTLFVNGIPQKNNRKEALLSHFRKFGEVIDIYI 522
Query: 29 PQNSEKAFV 3
P NSE+AFV
Sbjct: 523 PLNSERAFV 531
>ref|XP_003524556.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Glycine max]
Length = 922
Score = 180 bits (456), Expect = 6e-43
Identities = 117/295 (39%), Positives = 159/295 (53%), Gaps = 25/295 (8%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
+P QRCRDF+E+G+CLRGDMCPMEHGV+RIV+EDVQSLSQFNL VS ++H+ G AG
Sbjct: 227 IPRQRCRDFEERGFCLRGDMCPMEHGVNRIVIEDVQSLSQFNLPVSLPSAHLIGAPAGS- 285
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLNVVSSSSGLVE-ADVYDPDQPLWNN 456
+K +P K K ++ +D L L+ V + G AD+YDPDQPLWN+
Sbjct: 286 -GSLHSVNASTPSVNNKCLPGKISKSVVNDDGLPLDGVYTGPGCTSGADLYDPDQPLWND 344
Query: 455 GCQGTSEPTLMLSLENNDE--PVWNXXXXXXXXXXXQ----------------IGHS-SR 333
+S L L DE P+ N IG S +R
Sbjct: 345 CGLESSNALLTLQSSKIDESKPISNDAPDSDCPVGTARTSVSSQGASSSVWARIGSSKNR 404
Query: 332 SEMGIISINNALPTNLLSNEMKVDKENSIVKASATVPEKQFTTEKSQKPTTN-----HHN 168
+M + + N N++K D + + +A+ KQ + + +
Sbjct: 405 FDMKEKTNSTTSSFNYPENQLKEDNDELVGAHNASFQVKQNIADDADPKALEASLKAQTD 464
Query: 167 STSNSGRMSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFV 3
S N + SQKA TL+V+GIPQK N R+ALL+HF+KFG+V+DIYIP NSE+AFV
Sbjct: 465 SMRNIRKSSQKAFCTLFVNGIPQKYNKREALLAHFKKFGEVIDIYIPLNSERAFV 519
>gb|EMT09223.1| Zinc finger CCCH domain-containing protein 27 [Aegilops tauschii]
Length = 948
Score = 179 bits (454), Expect = 1e-42
Identities = 115/291 (39%), Positives = 157/291 (53%), Gaps = 21/291 (7%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
MP QRCRDF+E+G+CLRGDMCPMEHGV+RIVVED+QSLSQFNL VS N+ GIQ+
Sbjct: 228 MPRQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDMQSLSQFNLPVSVPNAPGLGIQS--- 284
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLNVVSSSSGLVEADVYDPDQPLWNNG 453
SK VPAKD K + ++ KLN S+ S + +ADVYDPDQPLWNN
Sbjct: 285 -EAGTAHVNLTNLGGSKGVPAKDMKSGVADNPSKLN-GSTVSAVADADVYDPDQPLWNNE 342
Query: 452 CQGTSEPTLMLSLENNDEPVWNXXXXXXXXXXXQIGH------------------SSRSE 327
S + + ++ +WN +S+ +
Sbjct: 343 RPEAS----IAGFAHTNDGIWNAETSSYEAGWEHANQGFAADDSQNPKSSVWGRIASKRK 398
Query: 326 MGIISINNALPTNLLSNEMKVDKENSIVKASATVPEKQFTTEKSQKPTTNHHNS---TSN 156
G N T+ N+ ++ +TV K +T+ + ++ ++ +
Sbjct: 399 SGPGKTANTTSTSATGNQRSDYNDD---MGPSTVQVKPASTKDTNGRPSSRMSADVGRQS 455
Query: 155 SGRMSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFV 3
+ R S KASRTLYV+GIP + N +ALLSHF+KFG V+DIY+P NSEKAF+
Sbjct: 456 NSRTSHKASRTLYVNGIPPESNRWEALLSHFEKFGQVIDIYVPANSEKAFI 506
>gb|EMS47346.1| Zinc finger CCCH domain-containing protein 27 [Triticum urartu]
Length = 926
Score = 179 bits (454), Expect = 1e-42
Identities = 113/288 (39%), Positives = 148/288 (51%), Gaps = 18/288 (6%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
MP QRCRDF+E+G+CLRGDMCPMEHGV+RIVVED+QSLSQFNL VS N+ GIQ+
Sbjct: 228 MPRQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDMQSLSQFNLPVSVPNAPGLGIQS--- 284
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLNVVSSSSGLVEADVYDPDQPLWNNG 453
SK VPAKD K + ++ KLN S++S + +ADVYDPDQPLWNN
Sbjct: 285 -ETGTAHVNLTNLGGSKGVPAKDIKSGVADNPSKLN-GSTASAVADADVYDPDQPLWNNE 342
Query: 452 CQGTSEPTLMLSLENNDEPVWNXXXXXXXXXXXQIGH------------------SSRSE 327
S + ++ +WN +S+ +
Sbjct: 343 RPEASS----AGFAHTNDGIWNAETSSYEAGWEHANQGFAADDSQNPKSSVWGRIASKRK 398
Query: 326 MGIISINNALPTNLLSNEMKVDKENSIVKASATVPEKQFTTEKSQKPTTNHHNSTSNSGR 147
G N T+ N+ ++ P T + ++ R
Sbjct: 399 PGPGKTANTTSTSATGNQRSDYNDDMAPSTVQVKPASIKDTNGRPSSRMSADVGRQSNSR 458
Query: 146 MSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFV 3
S KASRTLYV+GIP + N +ALLSHF+KFG V+DIY+P NSEKAF+
Sbjct: 459 TSHKASRTLYVNGIPPESNRWEALLSHFEKFGQVIDIYVPANSEKAFI 506
>gb|EOY02483.1| Zinc finger family protein / RNA recognition motif-containing
protein, putative [Theobroma cacao]
Length = 941
Score = 176 bits (447), Expect = 7e-42
Identities = 121/304 (39%), Positives = 163/304 (53%), Gaps = 34/304 (11%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
+P QRCRDF+E+G+CLRGDMCPMEHGV+RIVVEDVQSLSQFNL V+ N+ + AG
Sbjct: 227 IPRQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVTVPNAQLLATPAGP- 285
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLN-VVSSSSGLVEADVYDPDQPLWN- 459
SK + +K K + +D L LN + + S+ AD+YDPDQPLWN
Sbjct: 286 GPLTSGVPPSTTLMNSKGIHSKSSKTGMADDVLGLNGIYTGSTSASGADLYDPDQPLWNK 345
Query: 458 NGCQGT-------------SEPTL-----------MLSLENNDEPVWNXXXXXXXXXXXQ 351
NG + + +EP L + +N+ P+
Sbjct: 346 NGPEASAALSGIHSPKLDEAEPLLNDDMSDRHHGRLRDSVDNELPIRGTGSQGTSLSVWG 405
Query: 350 IGHSSRSEMGIISINNALPTNLLSNEMKVDKE--------NSIVKASATVPEKQFTTEKS 195
SRS + + ++ L NE K ++E + VK +T + + S
Sbjct: 406 RIGGSRSRIDTKEKIDLTSSDYLENETKEEQEAFPSSQGTSRHVKHISTEDDGSKVMDSS 465
Query: 194 QKPTTNHHNSTSNSGRMSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSE 15
K T +S NS + +QKA RTL+V+GIPQK N R+ALLSHF+KFG+VVDIYIP NSE
Sbjct: 466 FKSQT---DSMRNSRKPTQKALRTLFVNGIPQKSNKREALLSHFRKFGEVVDIYIPLNSE 522
Query: 14 KAFV 3
+AFV
Sbjct: 523 RAFV 526
>ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis]
gi|223536016|gb|EEF37674.1| rrm/rnp domain, putative
[Ricinus communis]
Length = 972
Score = 174 bits (442), Expect = 3e-41
Identities = 118/307 (38%), Positives = 158/307 (51%), Gaps = 37/307 (12%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
+P QRCRDF+E+G+CLRGDMCPMEHG++RIVVEDVQSLSQFNL VS ++ + G AG
Sbjct: 226 IPRQRCRDFEERGFCLRGDMCPMEHGINRIVVEDVQSLSQFNLPVSLPSAPLVGTPAGP- 284
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLN-VVSSSSGLVEADVYDPDQPLWNN 456
SK + +++ K + +D + N S S+ AD+YDPDQPLWN
Sbjct: 285 GALQSVGASSTTLMNSKGLHSRNSKSGMVDDGMGFNGAYSVSAAGSGADLYDPDQPLWNT 344
Query: 455 GCQGTSEPTLMLSLENNDEPVWNXXXXXXXXXXXQIGHSSRSEMG--------------- 321
TS L L NDE ++ ++ +E G
Sbjct: 345 NGPETSSGLLALHSSKNDETESFMSVGTSDHHHGRLRDNADNECGMRNTAIPDGSQTTSS 404
Query: 320 -----IISINNAL-----------PTNLLSNEMKVDKENSIVKASATVPEKQFTTEKSQK 189
+ S+ N L ++ L NE K D++ + K+ +E S
Sbjct: 405 SVWGRVGSVKNRLDMKEKTDLTVSTSDYLENETKEDQDALANIQGTSRQGKRMISEDSGP 464
Query: 188 PTTNHHNSTS-----NSGRMSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQ 24
T + T N+ + SQKA TL+V GIPQK+N RD+LLSHFQKFG V+DIYIP
Sbjct: 465 KTLDFSTKTQGDSMRNTRKSSQKALCTLFVSGIPQKNNKRDSLLSHFQKFGLVIDIYIPS 524
Query: 23 NSEKAFV 3
NSE+AFV
Sbjct: 525 NSERAFV 531
>dbj|BAJ91502.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 500
Score = 171 bits (433), Expect = 3e-40
Identities = 108/282 (38%), Positives = 143/282 (50%), Gaps = 18/282 (6%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
MP QRCRDF+E+G+CLRGDMCPMEHGV+RIVVED+QSLSQFNL VS N+ PG+ G +
Sbjct: 228 MPRQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDMQSLSQFNLPVSVPNA--PGV--GNQ 283
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLNVVSSSSGLVEADVYDPDQPLWNNG 453
SK VPAKD K + ++ KLN S++S + +ADVYDPDQPLWNN
Sbjct: 284 SEAGTAHVNFTNLGGSKGVPAKDIKSGVADNPSKLN-GSTASAVADADVYDPDQPLWNNE 342
Query: 452 CQGTSEPTLMLSLENNDEPVWNXXXXXXXXXXXQIGHS------------------SRSE 327
S + ++ +WN S S+ +
Sbjct: 343 RPEASS----AGFAHTNDGIWNAETSSYEAGWEHANQSFAADDSQNPKSSVWGRIASKRK 398
Query: 326 MGIISINNALPTNLLSNEMKVDKENSIVKASATVPEKQFTTEKSQKPTTNHHNSTSNSGR 147
G N T+ N+ ++ P T + ++ R
Sbjct: 399 SGPGKTANTTSTSATGNQRSDYNDDMTPSTVQVKPASTKDTNGRPSSRISADVGRQSNNR 458
Query: 146 MSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQN 21
S KASRTLYV+GIP + N ++LLSHF+KFG V+DIY+P N
Sbjct: 459 TSHKASRTLYVNGIPPESNRWESLLSHFEKFGQVIDIYVPAN 500
>ref|XP_002324006.1| hypothetical protein POPTR_0017s10830g [Populus trichocarpa]
gi|222867008|gb|EEF04139.1| hypothetical protein
POPTR_0017s10830g [Populus trichocarpa]
Length = 964
Score = 170 bits (431), Expect = 5e-40
Identities = 118/307 (38%), Positives = 156/307 (50%), Gaps = 37/307 (12%)
Frame = -1
Query: 812 MPHQRCRDFDEQGYCLRGDMCPMEHGVHRIVVEDVQSLSQFNLSVSDRNSHVPGIQAGKR 633
+P QRCRDF+E+G+CLRGDMCPMEHGV+RIVVEDVQSLSQFNL VS + + G A +
Sbjct: 215 IPQQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSLPRAQLVGTTA-RP 273
Query: 632 XXXXXXXXXXXXXXXSKFVPAKDGKPLLPEDSLKLNVVSSSSGLVE-ADVYDPDQPLWNN 456
SK + +K KP + L N + S V D+YDPDQPLWN+
Sbjct: 274 GALPTVGAPSATLINSKGMHSKCNKPGIVNAGLGFNGAHTGSASVSGGDLYDPDQPLWND 333
Query: 455 GCQGTSEPTL------------MLSLENNDE-------PVWNXXXXXXXXXXXQIGHSSR 333
TS + M+S+++ D N +
Sbjct: 334 SVPETSSALIAPHSPKIDEIESMISIDSFDHNHVSLRGGADNECPIRSTGIAVHSESLNS 393
Query: 332 SEMGIISINN---------ALPTNLLSNEMKVDKENSIVKAS---ATVPEKQFTTEKS-- 195
S G + +N L ++L+N KEN A+ + KQ E S
Sbjct: 394 SVWGKVRASNNRLHVKEKTDLTVSMLNNMESESKENQGALANVRGTSRQGKQINFEDSSA 453
Query: 194 ---QKPTTNHHNSTSNSGRMSQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQ 24
P N+ ++ + SQKA RTL+V+GIPQK N R+ALLSHFQKFG+V+DIYIP
Sbjct: 454 KTIDSPAKTQSNTMRHTPKPSQKALRTLFVNGIPQKSNKREALLSHFQKFGEVIDIYIPL 513
Query: 23 NSEKAFV 3
N+E+AFV
Sbjct: 514 NTERAFV 520