BLASTX nr result

ID: Zingiber24_contig00027424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00027424
         (648 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006844824.1| hypothetical protein AMTR_s00058p00057440 [A...    64   4e-08
ref|XP_004155384.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    63   6e-08
ref|XP_004135172.1| PREDICTED: uncharacterized protein LOC101218...    63   6e-08
ref|XP_004298423.1| PREDICTED: uncharacterized protein LOC101302...    59   1e-06
gb|AFK37413.1| unknown [Medicago truncatula]                           39   3e-06

>ref|XP_006844824.1| hypothetical protein AMTR_s00058p00057440 [Amborella trichopoda]
           gi|548847315|gb|ERN06499.1| hypothetical protein
           AMTR_s00058p00057440 [Amborella trichopoda]
          Length = 334

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 43/124 (34%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
 Frame = -3

Query: 364 SLRLTHVDASLVFSMYPSLLTSDPSADLVSVFGFLLGPAEIPFPDLRKTNGRCXXXXXXX 185
           S+ LT  D   +FSM P LLT DP  DL  VF FLL   +IP+ D+RKT  RC       
Sbjct: 123 SMGLTKNDIGRIFSMLPQLLTCDPDKDLYPVFEFLLNEVKIPYEDIRKTIVRCPRLLVSS 182

Query: 184 XXXXXXXXXXXXXXXXXXXXXXXXXPRS---SSPASRTLIPEIECFCSLGISHRGTSSVV 14
                                      +    S    TLIP+++   SLG S+R +  +V
Sbjct: 183 VRDQLRPAFYFLQRLGFVGPHAVNCQTTLLLVSNVENTLIPKLDYLQSLGFSYRESVKMV 242

Query: 13  LRSP 2
           LRSP
Sbjct: 243 LRSP 246


>ref|XP_004155384.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101227489 [Cucumis sativus]
          Length = 278

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 41/124 (33%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
 Frame = -3

Query: 364 SLRLTHVDASLVFSMYPSLLTSDPSADLVSVFGFLLGPAEIPFPDLRKTNGRCXXXXXXX 185
           S+ L     S V  M+P LLTS+P  D+  +F FLL   EIPFPD+RK+  RC       
Sbjct: 68  SMGLDRSAVSRVLDMHPKLLTSNPDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSD 127

Query: 184 XXXXXXXXXXXXXXXXXXXXXXXXXPRS---SSPASRTLIPEIECFCSLGISHRGTSSVV 14
                                      +    S    TL+P+I+   SLG+SH    ++V
Sbjct: 128 LDHQLRPALKFLRDLGFVGLKAITCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMV 187

Query: 13  LRSP 2
           LRSP
Sbjct: 188 LRSP 191


>ref|XP_004135172.1| PREDICTED: uncharacterized protein LOC101218193 [Cucumis sativus]
          Length = 308

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 41/124 (33%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
 Frame = -3

Query: 364 SLRLTHVDASLVFSMYPSLLTSDPSADLVSVFGFLLGPAEIPFPDLRKTNGRCXXXXXXX 185
           S+ L     S V  M+P LLTS+P  D+  +F FLL   EIPFPD+RK+  RC       
Sbjct: 98  SMGLDRSAVSRVLDMHPKLLTSNPDYDIYPIFDFLLNEVEIPFPDIRKSIIRCPRILVSD 157

Query: 184 XXXXXXXXXXXXXXXXXXXXXXXXXPRS---SSPASRTLIPEIECFCSLGISHRGTSSVV 14
                                      +    S    TL+P+I+   SLG+SH    ++V
Sbjct: 158 LDHQLRPALKFLRDLGFVGLKAITCQTTLLLVSSVEHTLLPKIQYLESLGLSHEDVVNMV 217

Query: 13  LRSP 2
           LRSP
Sbjct: 218 LRSP 221


>ref|XP_004298423.1| PREDICTED: uncharacterized protein LOC101302749 [Fragaria vesca
           subsp. vesca]
          Length = 302

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 38/110 (34%), Positives = 49/110 (44%)
 Frame = -3

Query: 331 VFSMYPSLLTSDPSADLVSVFGFLLGPAEIPFPDLRKTNGRCXXXXXXXXXXXXXXXXXX 152
           +  M+P LLT+DP   L  VF FLL  A IPFPD+RK+  RC                  
Sbjct: 109 ILDMHPELLTADPHLRLYPVFDFLLHDARIPFPDIRKSVVRCPRLLVCDVTTQLRPALLF 168

Query: 151 XXXXXXXXXXXXXXPRSSSPASRTLIPEIECFCSLGISHRGTSSVVLRSP 2
                            SS    TL+P+IE   SLG+ H    ++V+RSP
Sbjct: 169 LTQLGLRVTCQTTVLLVSS-VKGTLVPKIEYLESLGLGHADVVNMVIRSP 217


>gb|AFK37413.1| unknown [Medicago truncatula]
          Length = 217

 Score = 39.3 bits (90), Expect(2) = 3e-06
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = -3

Query: 331 VFSMYPSLLTSDPSADLVSVFGFLLGPAEIPFPDLRKTNGRC 206
           +  M P LLT +P +D+  +  FLL   EIP+ D+ K+  RC
Sbjct: 109 ILDMLPELLTCEPYSDIYPLLDFLLNEVEIPYHDVHKSILRC 150



 Score = 38.1 bits (87), Expect(2) = 3e-06
 Identities = 21/36 (58%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
 Frame = -2

Query: 182 DQLLTALNFLRLLGFVGRNRITCRTT-VLVSSFKDT 78
           ++L  AL FLR LGFVG + +TC+TT +LVSS +DT
Sbjct: 160 NRLRPALCFLRELGFVGPHSLTCQTTLLLVSSVEDT 195


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