BLASTX nr result
ID: Zingiber24_contig00027358
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00027358
(798 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006574608.1| PREDICTED: RNA-binding protein 25-like isofo... 76 1e-11
ref|XP_003517728.1| PREDICTED: RNA-binding protein 25-like isofo... 76 2e-11
ref|XP_006844223.1| hypothetical protein AMTR_s00006p00267030 [A... 74 6e-11
gb|EMJ26546.1| hypothetical protein PRUPE_ppa000960mg [Prunus pe... 73 1e-10
gb|EXB82610.1| RNA-binding protein 25 [Morus notabilis] 71 4e-10
emb|CBI32140.3| unnamed protein product [Vitis vinifera] 69 1e-09
ref|XP_002264457.1| PREDICTED: uncharacterized protein LOC100263... 69 1e-09
ref|XP_002315807.1| splicing factor PWI domain-containing family... 68 3e-09
ref|XP_006379815.1| hypothetical protein POPTR_0008s14630g [Popu... 67 6e-09
ref|XP_006574615.1| PREDICTED: RNA-binding protein 25-like isofo... 67 9e-09
ref|XP_006574609.1| PREDICTED: RNA-binding protein 25-like isofo... 67 9e-09
ref|XP_006573039.1| PREDICTED: RNA-binding protein 25-like isofo... 67 9e-09
gb|ESW29460.1| hypothetical protein PHAVU_002G071900g [Phaseolus... 67 9e-09
ref|XP_006574617.1| PREDICTED: RNA-binding protein 25-like isofo... 67 9e-09
ref|XP_003613243.1| RNA-binding protein [Medicago truncatula] gi... 66 2e-08
ref|XP_004489851.1| PREDICTED: RNA-binding protein 25-like isofo... 65 3e-08
ref|XP_004489850.1| PREDICTED: RNA-binding protein 25-like isofo... 65 3e-08
ref|XP_004489849.1| PREDICTED: RNA-binding protein 25-like isofo... 65 3e-08
ref|XP_004297637.1| PREDICTED: uncharacterized protein LOC101309... 65 3e-08
gb|AGV54524.1| splicing factor PWI domain-containing protein [Ph... 65 4e-08
>ref|XP_006574608.1| PREDICTED: RNA-binding protein 25-like isoform X1 [Glycine max]
Length = 921
Score = 76.3 bits (186), Expect = 1e-11
Identities = 58/181 (32%), Positives = 76/181 (41%), Gaps = 1/181 (0%)
Frame = -2
Query: 542 PPVPQYSGANSPMAQNPAFLASMGQPPSIHPPGVSTXXXXXXXXXXXXAVLPLRSGIPYQ 363
P PQ+S SP NPAF Q P++ PPGV+ ++ + YQ
Sbjct: 74 PLAPQFSPVPSP---NPAF-----QSPAVPPPGVTGAAVAVPPPQ-------MQQMLSYQ 118
Query: 362 VAPGQPSAPMPYAQVGNGYMSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183
+ PG P A P+A + NGY +
Sbjct: 119 IQPGNP-ALRPFAPIPNGYAAAPTITPAGIPRYPPPYGTMVRPVFPARPPGAVNIPTISR 177
Query: 182 XXXXXXXXXXXXGLPPVATPIVRPIV-PVSTPMEKPQTTVYVGKIATTVENEFLLSILTL 6
+ P+ P+VRP+V P TP EKPQ TVY+GKIA TVENEF+LS+L L
Sbjct: 178 PPVAGIPA-----VRPIIPPVVRPVVAPSVTPAEKPQNTVYIGKIAPTVENEFMLSLLQL 232
Query: 5 C 3
C
Sbjct: 233 C 233
>ref|XP_003517728.1| PREDICTED: RNA-binding protein 25-like isoform X1 [Glycine max]
Length = 927
Score = 75.9 bits (185), Expect = 2e-11
Identities = 58/181 (32%), Positives = 77/181 (42%), Gaps = 1/181 (0%)
Frame = -2
Query: 542 PPVPQYSGANSPMAQNPAFLASMGQPPSIHPPGVSTXXXXXXXXXXXXAVLPLRSGIPYQ 363
P VPQ+S +P NPA+ Q P++ PPGV +++ + YQ
Sbjct: 77 PQVPQFSPVPAP---NPAY-----QNPAVPPPGVPGATVAVPPPQ-------MQAMMSYQ 121
Query: 362 VAPGQPSAPMPYAQVGNGYMSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183
V PG P A P+A + NGY +
Sbjct: 122 VQPGNP-AMRPFAPIPNGYAAAPNVTPAGIPRYPPPYGTMVRPVFPARPPGAVNIPTISR 180
Query: 182 XXXXXXXXXXXXGLPPVATPIVRPIV-PVSTPMEKPQTTVYVGKIATTVENEFLLSILTL 6
+ P+ P+VRP+V P TP EKPQ TVY+GKIA TVENEF+LS+L L
Sbjct: 181 PPVAGIPA-----VRPIIPPVVRPVVAPSVTPAEKPQNTVYIGKIAPTVENEFMLSLLQL 235
Query: 5 C 3
C
Sbjct: 236 C 236
>ref|XP_006844223.1| hypothetical protein AMTR_s00006p00267030 [Amborella trichopoda]
gi|548846622|gb|ERN05898.1| hypothetical protein
AMTR_s00006p00267030 [Amborella trichopoda]
Length = 930
Score = 73.9 bits (180), Expect = 6e-11
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = -2
Query: 143 LPPVATPIVRPIVPVSTPMEKPQTTVYVGKIATTVENEFLLSILTLC 3
+PP+ +P VRP VP+ MEKPQTTVYVGKIATTVEN+FLLS+L LC
Sbjct: 195 VPPIMSPPVRPAVPIIPMMEKPQTTVYVGKIATTVENDFLLSLLRLC 241
>gb|EMJ26546.1| hypothetical protein PRUPE_ppa000960mg [Prunus persica]
Length = 950
Score = 73.2 bits (178), Expect = 1e-10
Identities = 57/181 (31%), Positives = 73/181 (40%), Gaps = 2/181 (1%)
Frame = -2
Query: 539 PVPQYSGANSPMAQNPAFLASMGQPPSIHPPGVSTXXXXXXXXXXXXAVLPLRSGIPYQV 360
PVPQ+S SP NP + P + PPGVS+ +V P + YQ+
Sbjct: 87 PVPQFSPIPSPGVPNPNY-----HNPGVQPPGVSSGSPMAPGVPPPSSVPPHM--MHYQM 139
Query: 359 APGQPSAPMPYAQVGNGY--MSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
P + APMP NGY M
Sbjct: 140 QPMRAYAPMP-----NGYAAMPTGAPQGSMPLPGLARYPSPYHAMLRPAFTPRPPGSIGS 194
Query: 185 XXXXXXXXXXXXXGLPPVATPIVRPIVPVSTPMEKPQTTVYVGKIATTVENEFLLSILTL 6
G+ P+ P+VRP +P TP EKPQTTVYVGKI TV+N+F+L +L L
Sbjct: 195 LPGLPRGPVPGIPGVRPIMPPVVRPTLPSVTPAEKPQTTVYVGKIPPTVDNDFMLYLLQL 254
Query: 5 C 3
C
Sbjct: 255 C 255
>gb|EXB82610.1| RNA-binding protein 25 [Morus notabilis]
Length = 1006
Score = 71.2 bits (173), Expect = 4e-10
Identities = 31/45 (68%), Positives = 37/45 (82%)
Frame = -2
Query: 137 PVATPIVRPIVPVSTPMEKPQTTVYVGKIATTVENEFLLSILTLC 3
P+ PIVRP++P TP EKPQTTVYVGKIA TVEN+F+LS+L C
Sbjct: 251 PIIPPIVRPVIPSVTPAEKPQTTVYVGKIAPTVENDFMLSVLQFC 295
>emb|CBI32140.3| unnamed protein product [Vitis vinifera]
Length = 828
Score = 69.3 bits (168), Expect = 1e-09
Identities = 32/46 (69%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
Frame = -2
Query: 137 PVATPIVRP-IVPVSTPMEKPQTTVYVGKIATTVENEFLLSILTLC 3
P+ P+VRP IVPV+ P EKPQTTVYVGKIA+TVEN+F+LS+L +C
Sbjct: 85 PIMPPVVRPAIVPVAAPTEKPQTTVYVGKIASTVENDFILSLLQVC 130
>ref|XP_002264457.1| PREDICTED: uncharacterized protein LOC100263874 [Vitis vinifera]
Length = 958
Score = 69.3 bits (168), Expect = 1e-09
Identities = 32/46 (69%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
Frame = -2
Query: 137 PVATPIVRP-IVPVSTPMEKPQTTVYVGKIATTVENEFLLSILTLC 3
P+ P+VRP IVPV+ P EKPQTTVYVGKIA+TVEN+F+LS+L +C
Sbjct: 215 PIMPPVVRPAIVPVAAPTEKPQTTVYVGKIASTVENDFILSLLQVC 260
>ref|XP_002315807.1| splicing factor PWI domain-containing family protein [Populus
trichocarpa] gi|222864847|gb|EEF01978.1| splicing factor
PWI domain-containing family protein [Populus
trichocarpa]
Length = 894
Score = 68.2 bits (165), Expect = 3e-09
Identities = 53/181 (29%), Positives = 72/181 (39%)
Frame = -2
Query: 545 APPVPQYSGANSPMAQNPAFLASMGQPPSIHPPGVSTXXXXXXXXXXXXAVLPLRSGIPY 366
APP PQ + + P++ P A Q PS+ P ++P PY
Sbjct: 50 APP-PQLAPSFRPVSAPPPAAAQFYQNPSVGVP----------------PMMP-----PY 87
Query: 365 QVAPGQPSAPMPYAQVGNGYMSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
QV PG + YA + NGY
Sbjct: 88 QVQPGVQAPRPHYAPIPNGYQG-----NIAPPPGIMRYPSPYPAMVRPLFPPRPPGALSV 142
Query: 185 XXXXXXXXXXXXXGLPPVATPIVRPIVPVSTPMEKPQTTVYVGKIATTVENEFLLSILTL 6
G+ PV PI+RP++P TP EKPQTTVY+GKIA +VEN+F++S+L
Sbjct: 143 VPAVPRPLVPGIPGVRPVMYPIIRPVIPSVTPAEKPQTTVYIGKIAPSVENDFMMSLLQF 202
Query: 5 C 3
C
Sbjct: 203 C 203
>ref|XP_006379815.1| hypothetical protein POPTR_0008s14630g [Populus trichocarpa]
gi|566184001|ref|XP_006379816.1| hypothetical protein
POPTR_0008s14630g [Populus trichocarpa]
gi|550333083|gb|ERP57612.1| hypothetical protein
POPTR_0008s14630g [Populus trichocarpa]
gi|550333084|gb|ERP57613.1| hypothetical protein
POPTR_0008s14630g [Populus trichocarpa]
Length = 698
Score = 67.4 bits (163), Expect = 6e-09
Identities = 31/45 (68%), Positives = 37/45 (82%)
Frame = -2
Query: 137 PVATPIVRPIVPVSTPMEKPQTTVYVGKIATTVENEFLLSILTLC 3
PV + I+RP+VP TP EKPQTTVYVGKIA +VEN+FL S+L LC
Sbjct: 75 PVISQIIRPVVPSVTPAEKPQTTVYVGKIAPSVENDFLSSLLQLC 119
>ref|XP_006574615.1| PREDICTED: RNA-binding protein 25-like isoform X8 [Glycine max]
gi|571438589|ref|XP_006574616.1| PREDICTED: RNA-binding
protein 25-like isoform X9 [Glycine max]
Length = 778
Score = 66.6 bits (161), Expect = 9e-09
Identities = 31/46 (67%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -2
Query: 137 PVATPIVRPIV-PVSTPMEKPQTTVYVGKIATTVENEFLLSILTLC 3
P+ P+VRP+V P TP EKPQ TVY+GKIA TVENEF+LS+L LC
Sbjct: 45 PIIPPVVRPVVAPSVTPAEKPQNTVYIGKIAPTVENEFMLSLLQLC 90
>ref|XP_006574609.1| PREDICTED: RNA-binding protein 25-like isoform X2 [Glycine max]
gi|571438577|ref|XP_006574610.1| PREDICTED: RNA-binding
protein 25-like isoform X3 [Glycine max]
gi|571438579|ref|XP_006574611.1| PREDICTED: RNA-binding
protein 25-like isoform X4 [Glycine max]
gi|571438581|ref|XP_006574612.1| PREDICTED: RNA-binding
protein 25-like isoform X5 [Glycine max]
gi|571438583|ref|XP_006574613.1| PREDICTED: RNA-binding
protein 25-like isoform X6 [Glycine max]
gi|571438585|ref|XP_006574614.1| PREDICTED: RNA-binding
protein 25-like isoform X7 [Glycine max]
Length = 818
Score = 66.6 bits (161), Expect = 9e-09
Identities = 31/46 (67%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -2
Query: 137 PVATPIVRPIV-PVSTPMEKPQTTVYVGKIATTVENEFLLSILTLC 3
P+ P+VRP+V P TP EKPQ TVY+GKIA TVENEF+LS+L LC
Sbjct: 85 PIIPPVVRPVVAPSVTPAEKPQNTVYIGKIAPTVENEFMLSLLQLC 130
>ref|XP_006573039.1| PREDICTED: RNA-binding protein 25-like isoform X2 [Glycine max]
gi|571433907|ref|XP_006573040.1| PREDICTED: RNA-binding
protein 25-like isoform X3 [Glycine max]
gi|571433909|ref|XP_006573041.1| PREDICTED: RNA-binding
protein 25-like isoform X4 [Glycine max]
gi|571433911|ref|XP_006573042.1| PREDICTED: RNA-binding
protein 25-like isoform X5 [Glycine max]
gi|571433913|ref|XP_006573043.1| PREDICTED: RNA-binding
protein 25-like isoform X6 [Glycine max]
gi|571433915|ref|XP_006573044.1| PREDICTED: RNA-binding
protein 25-like isoform X7 [Glycine max]
gi|571433917|ref|XP_006573045.1| PREDICTED: RNA-binding
protein 25-like isoform X8 [Glycine max]
gi|571433919|ref|XP_006573046.1| PREDICTED: RNA-binding
protein 25-like isoform X9 [Glycine max]
Length = 768
Score = 66.6 bits (161), Expect = 9e-09
Identities = 31/46 (67%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -2
Query: 137 PVATPIVRPIV-PVSTPMEKPQTTVYVGKIATTVENEFLLSILTLC 3
P+ P+VRP+V P TP EKPQ TVY+GKIA TVENEF+LS+L LC
Sbjct: 32 PIIPPVVRPVVAPSVTPAEKPQNTVYIGKIAPTVENEFMLSLLQLC 77
>gb|ESW29460.1| hypothetical protein PHAVU_002G071900g [Phaseolus vulgaris]
Length = 924
Score = 66.6 bits (161), Expect = 9e-09
Identities = 31/46 (67%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
Frame = -2
Query: 137 PVATPIVRPIV-PVSTPMEKPQTTVYVGKIATTVENEFLLSILTLC 3
P+ P+VRP+V P TP EKPQ TVY+GKIA+TVENEF+LS+L LC
Sbjct: 192 PIIPPVVRPMVAPSVTPAEKPQNTVYIGKIASTVENEFMLSLLQLC 237
>ref|XP_006574617.1| PREDICTED: RNA-binding protein 25-like isoform X10 [Glycine max]
Length = 765
Score = 66.6 bits (161), Expect = 9e-09
Identities = 31/46 (67%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -2
Query: 137 PVATPIVRPIV-PVSTPMEKPQTTVYVGKIATTVENEFLLSILTLC 3
P+ P+VRP+V P TP EKPQ TVY+GKIA TVENEF+LS+L LC
Sbjct: 32 PIIPPVVRPVVAPSVTPAEKPQNTVYIGKIAPTVENEFMLSLLQLC 77
>ref|XP_003613243.1| RNA-binding protein [Medicago truncatula]
gi|355514578|gb|AES96201.1| RNA-binding protein
[Medicago truncatula]
Length = 771
Score = 65.9 bits (159), Expect = 2e-08
Identities = 31/46 (67%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -2
Query: 137 PVATPIVRPIVPVS-TPMEKPQTTVYVGKIATTVENEFLLSILTLC 3
P+ P+VRP+VP S TP EK TTVY+GKIA TVENEF+LS+L LC
Sbjct: 32 PIIPPVVRPVVPPSVTPAEKQHTTVYIGKIAPTVENEFMLSLLKLC 77
>ref|XP_004489851.1| PREDICTED: RNA-binding protein 25-like isoform X3 [Cicer arietinum]
gi|502092999|ref|XP_004489852.1| PREDICTED: RNA-binding
protein 25-like isoform X4 [Cicer arietinum]
gi|502093001|ref|XP_004489853.1| PREDICTED: RNA-binding
protein 25-like isoform X5 [Cicer arietinum]
gi|502093003|ref|XP_004489854.1| PREDICTED: RNA-binding
protein 25-like isoform X6 [Cicer arietinum]
Length = 775
Score = 65.1 bits (157), Expect = 3e-08
Identities = 29/46 (63%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -2
Query: 137 PVATPIVRPIVP-VSTPMEKPQTTVYVGKIATTVENEFLLSILTLC 3
P+ P++RP+VP + TP EK TTVY+GKIA TVENEF+LS+L LC
Sbjct: 32 PIIPPVIRPVVPPIVTPSEKQHTTVYIGKIAPTVENEFMLSLLKLC 77
>ref|XP_004489850.1| PREDICTED: RNA-binding protein 25-like isoform X2 [Cicer arietinum]
Length = 957
Score = 65.1 bits (157), Expect = 3e-08
Identities = 29/46 (63%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -2
Query: 137 PVATPIVRPIVP-VSTPMEKPQTTVYVGKIATTVENEFLLSILTLC 3
P+ P++RP+VP + TP EK TTVY+GKIA TVENEF+LS+L LC
Sbjct: 217 PIIPPVIRPVVPPIVTPSEKQHTTVYIGKIAPTVENEFMLSLLKLC 262
>ref|XP_004489849.1| PREDICTED: RNA-binding protein 25-like isoform X1 [Cicer arietinum]
Length = 960
Score = 65.1 bits (157), Expect = 3e-08
Identities = 29/46 (63%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -2
Query: 137 PVATPIVRPIVP-VSTPMEKPQTTVYVGKIATTVENEFLLSILTLC 3
P+ P++RP+VP + TP EK TTVY+GKIA TVENEF+LS+L LC
Sbjct: 217 PIIPPVIRPVVPPIVTPSEKQHTTVYIGKIAPTVENEFMLSLLKLC 262
>ref|XP_004297637.1| PREDICTED: uncharacterized protein LOC101309725 [Fragaria vesca
subsp. vesca]
Length = 764
Score = 65.1 bits (157), Expect = 3e-08
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = -2
Query: 137 PVATPIVRPIVPVSTPMEKPQTTVYVGKIATTVENEFLLSILTLC 3
P+ P+VRP VP TP EKPQTTV+VGKIA TV N+F+L +L LC
Sbjct: 33 PIMPPVVRPAVPSVTPAEKPQTTVFVGKIAPTVNNDFILYLLQLC 77
>gb|AGV54524.1| splicing factor PWI domain-containing protein [Phaseolus vulgaris]
Length = 887
Score = 64.7 bits (156), Expect = 4e-08
Identities = 30/46 (65%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -2
Query: 137 PVATPIVRPIV-PVSTPMEKPQTTVYVGKIATTVENEFLLSILTLC 3
P+ P+VRP+V P TP EKPQ TVY+GKIA+TVENEF+L +L LC
Sbjct: 155 PIIPPVVRPMVAPSVTPAEKPQNTVYIGKIASTVENEFMLPLLKLC 200