BLASTX nr result
ID: Zingiber24_contig00027352
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00027352
(595 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 145 1e-32
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 145 1e-32
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 145 1e-32
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 145 1e-32
tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family... 143 4e-32
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 142 5e-32
gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 142 7e-32
gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Tri... 142 7e-32
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 140 2e-31
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 140 2e-31
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 135 1e-29
gb|EMT10482.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 134 2e-29
gb|EMS65535.1| DNA-directed RNA polymerase III subunit RPC1 [Tri... 134 2e-29
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 129 5e-28
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 129 6e-28
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 129 8e-28
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 129 8e-28
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 128 1e-27
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 128 1e-27
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] 128 1e-27
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 145 bits (365), Expect = 1e-32
Identities = 69/84 (82%), Positives = 79/84 (94%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
KGE+LGITR+GI+KMK SVLMLASFEKTAEHLFNASY+GR+D+IEGVSECIIMGIPMQLG
Sbjct: 1305 KGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLG 1364
Query: 415 TGILKLRQRVEKLPELKYASDPII 344
TGILK+RQR++ LPE KY DPI+
Sbjct: 1365 TGILKVRQRLDHLPEFKYQPDPIL 1388
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 145 bits (365), Expect = 1e-32
Identities = 70/84 (83%), Positives = 79/84 (94%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
KGEVLGITR+GI+KMK SVLMLASFEKT+EHLFNASY+GR+D IEGVSECIIMGIPMQLG
Sbjct: 1313 KGEVLGITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIEGVSECIIMGIPMQLG 1372
Query: 415 TGILKLRQRVEKLPELKYASDPII 344
TGILK+RQR++ LPELKY DPI+
Sbjct: 1373 TGILKVRQRLDHLPELKYQPDPIL 1396
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 145 bits (365), Expect = 1e-32
Identities = 69/84 (82%), Positives = 79/84 (94%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
KGE+LGITR+GI+KMK SVLMLASFEKTAEHLFNASY+GR+D+IEGVSECIIMGIPMQLG
Sbjct: 1237 KGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLG 1296
Query: 415 TGILKLRQRVEKLPELKYASDPII 344
TGILK+RQR++ LPE KY DPI+
Sbjct: 1297 TGILKVRQRLDHLPEFKYQPDPIL 1320
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 145 bits (365), Expect = 1e-32
Identities = 69/84 (82%), Positives = 79/84 (94%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
KGE+LGITR+GI+KMK SVLMLASFEKTAEHLFNASY+GR+D+IEGVSECIIMGIPMQLG
Sbjct: 1299 KGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLG 1358
Query: 415 TGILKLRQRVEKLPELKYASDPII 344
TGILK+RQR++ LPE KY DPI+
Sbjct: 1359 TGILKVRQRLDHLPEFKYQPDPIL 1382
>tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 336
Score = 143 bits (360), Expect = 4e-32
Identities = 68/84 (80%), Positives = 78/84 (92%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
KGE+LGITR+GI+KMK SVLMLASFEKTAEHLFNASY+GR D+IEGVSECIIMGIPMQLG
Sbjct: 252 KGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGRQDQIEGVSECIIMGIPMQLG 311
Query: 415 TGILKLRQRVEKLPELKYASDPII 344
TGILK+RQR++ +PE KY DPI+
Sbjct: 312 TGILKVRQRLDHVPEFKYQPDPIL 335
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 142 bits (359), Expect = 5e-32
Identities = 67/84 (79%), Positives = 79/84 (94%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
KGE+LGITR+GI+KMK SVLMLASFEKT+EHLFNASY+GR+D+IEGVSECIIMGIPMQLG
Sbjct: 1307 KGEILGITRYGIAKMKSSVLMLASFEKTSEHLFNASYSGREDQIEGVSECIIMGIPMQLG 1366
Query: 415 TGILKLRQRVEKLPELKYASDPII 344
TGILK+RQR++ +PE KY DPI+
Sbjct: 1367 TGILKVRQRLDHVPEFKYQPDPIL 1390
>gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
Length = 1117
Score = 142 bits (358), Expect = 7e-32
Identities = 69/84 (82%), Positives = 78/84 (92%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
KGEVLGITR+GI+KMK SVLMLASFEKT+EHLFNASYAGR+D+I+GVSECIIMGIPMQLG
Sbjct: 1032 KGEVLGITRYGIAKMKSSVLMLASFEKTSEHLFNASYAGREDQIDGVSECIIMGIPMQLG 1091
Query: 415 TGILKLRQRVEKLPELKYASDPII 344
TGILK+RQR+E LPE KY PI+
Sbjct: 1092 TGILKVRQRLESLPEFKYQPAPIM 1115
>gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Triticum urartu]
Length = 1248
Score = 142 bits (358), Expect = 7e-32
Identities = 69/84 (82%), Positives = 78/84 (92%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
KGEVLGITR+GI+KMK SVLMLASFEKT+EHLFNASYAGR+D+I+GVSECIIMGIPMQLG
Sbjct: 1163 KGEVLGITRYGIAKMKSSVLMLASFEKTSEHLFNASYAGREDQIDGVSECIIMGIPMQLG 1222
Query: 415 TGILKLRQRVEKLPELKYASDPII 344
TGILK+RQR+E LPE KY PI+
Sbjct: 1223 TGILKVRQRLESLPEFKYQPAPIM 1246
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 140 bits (354), Expect = 2e-31
Identities = 68/84 (80%), Positives = 78/84 (92%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
+GEVLGITRFGI KM +SVLMLASFEKTA+HLFNAS +GRDD+IEGVSECIIMGIPMQLG
Sbjct: 1735 RGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLG 1794
Query: 415 TGILKLRQRVEKLPELKYASDPII 344
TGILK+RQR++++PEL Y DPII
Sbjct: 1795 TGILKVRQRLQQVPELSYGLDPII 1818
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 140 bits (354), Expect = 2e-31
Identities = 68/84 (80%), Positives = 78/84 (92%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
+GEVLGITRFGI KM +SVLMLASFEKTA+HLFNAS +GRDD+IEGVSECIIMGIPMQLG
Sbjct: 1299 RGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLG 1358
Query: 415 TGILKLRQRVEKLPELKYASDPII 344
TGILK+RQR++++PEL Y DPII
Sbjct: 1359 TGILKVRQRLQQVPELSYGLDPII 1382
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 135 bits (339), Expect = 1e-29
Identities = 67/84 (79%), Positives = 73/84 (86%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
KGEVLGITRFGI KMK SVLMLASFEKT EHLFNASY+GR+D IEGVSECIIMGIPM LG
Sbjct: 1308 KGEVLGITRFGIVKMKSSVLMLASFEKTLEHLFNASYSGREDEIEGVSECIIMGIPMTLG 1367
Query: 415 TGILKLRQRVEKLPELKYASDPII 344
+GILK+RQR++ LPE Y D II
Sbjct: 1368 SGILKVRQRLDHLPEFNYQPDAII 1391
>gb|EMT10482.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
Length = 832
Score = 134 bits (336), Expect = 2e-29
Identities = 64/84 (76%), Positives = 75/84 (89%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
KGE+LGIT GI+KMK SVLML+SFE+ +EHLFNASYAGR+D+IEGVSECIIMGIP QLG
Sbjct: 748 KGEILGITAGGIAKMKSSVLMLSSFERASEHLFNASYAGREDQIEGVSECIIMGIPKQLG 807
Query: 415 TGILKLRQRVEKLPELKYASDPII 344
TGILK+RQR++ LPE KY DPI+
Sbjct: 808 TGILKVRQRLQDLPEFKYQPDPIL 831
>gb|EMS65535.1| DNA-directed RNA polymerase III subunit RPC1 [Triticum urartu]
Length = 689
Score = 134 bits (336), Expect = 2e-29
Identities = 64/84 (76%), Positives = 75/84 (89%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
KGE+LGIT GI+KMK SVLML+SFE+ +EHLFNA YAGR+D+IEGVSECIIMGIPMQLG
Sbjct: 605 KGEILGITAGGIAKMKSSVLMLSSFERASEHLFNALYAGREDQIEGVSECIIMGIPMQLG 664
Query: 415 TGILKLRQRVEKLPELKYASDPII 344
TGILK+RQR++ LPE KY DPI+
Sbjct: 665 TGILKVRQRLQDLPEFKYQPDPIL 688
>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
polymerase III largest subunit, putative [Ricinus
communis]
Length = 1383
Score = 129 bits (325), Expect = 5e-28
Identities = 64/84 (76%), Positives = 74/84 (88%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
KGEVLGITRFGI KM +SVLMLASFEKTA+HL++A+ GRDD+IEGVSECIIMGIPMQ+G
Sbjct: 1299 KGEVLGITRFGIQKMDKSVLMLASFEKTADHLYHAAVFGRDDKIEGVSECIIMGIPMQIG 1358
Query: 415 TGILKLRQRVEKLPELKYASDPII 344
TGILK++QRV+ P L Y SD II
Sbjct: 1359 TGILKVQQRVDPPPVLNYGSDSII 1382
>ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1|
predicted protein [Physcomitrella patens]
Length = 1397
Score = 129 bits (324), Expect = 6e-28
Identities = 61/84 (72%), Positives = 74/84 (88%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
KGEVLGITRFGI+KMK+SVLMLASFEKT +HLF+A+ GR D+IEGVSECIIMGIPM +G
Sbjct: 1313 KGEVLGITRFGIAKMKDSVLMLASFEKTTDHLFDAAIHGRVDKIEGVSECIIMGIPMPIG 1372
Query: 415 TGILKLRQRVEKLPELKYASDPII 344
TG+ K+RQ+VEKLP+L Y P++
Sbjct: 1373 TGLFKIRQKVEKLPKLSYGPTPLL 1396
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 129 bits (323), Expect = 8e-28
Identities = 68/85 (80%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
+GEVLGITRFGI KM +SVLMLASFEKTA+HLFNAS GRDDRIEGVSECIIMGIPM LG
Sbjct: 1319 RGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLG 1378
Query: 415 TGILKLRQRVEKLPELKY-ASDPII 344
TGILK+RQR P LKY A DPI+
Sbjct: 1379 TGILKIRQRDAVPPMLKYGAPDPIM 1403
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 129 bits (323), Expect = 8e-28
Identities = 68/85 (80%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
+GEVLGITRFGI KM +SVLMLASFEKTA+HLFNAS GRDDRIEGVSECIIMGIPM LG
Sbjct: 1312 RGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLG 1371
Query: 415 TGILKLRQRVEKLPELKY-ASDPII 344
TGILK+RQR P LKY A DPI+
Sbjct: 1372 TGILKIRQRDAVPPMLKYGAPDPIM 1396
>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 1179
Score = 128 bits (321), Expect = 1e-27
Identities = 62/84 (73%), Positives = 73/84 (86%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
+GEVLGITRFGI KM +SVLMLASFEKTA+HLFNAS GR+D+IEGVSECIIMGIPMQ+G
Sbjct: 1094 RGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGREDKIEGVSECIIMGIPMQIG 1153
Query: 415 TGILKLRQRVEKLPELKYASDPII 344
TG++K+RQRV+ P L Y PI+
Sbjct: 1154 TGMIKVRQRVDVPPMLSYGPKPIL 1177
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 128 bits (321), Expect = 1e-27
Identities = 64/84 (76%), Positives = 73/84 (86%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
KGEVLGITR G+ KMK+SVLMLASFEKT +HLFNAS GRDD+IEGV+ECIIMGIPM +G
Sbjct: 1306 KGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIG 1365
Query: 415 TGILKLRQRVEKLPELKYASDPII 344
TG+ KLRQRVE++ EL Y DPII
Sbjct: 1366 TGMFKLRQRVEQV-ELNYQPDPII 1388
>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
Length = 1395
Score = 128 bits (321), Expect = 1e-27
Identities = 60/84 (71%), Positives = 74/84 (88%)
Frame = -1
Query: 595 KGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLG 416
+GEVLGITRFGI KM +S+LMLASFE+TA+HLFNA+ GRDD+IEGV+ECIIMGIPMQ+G
Sbjct: 1311 RGEVLGITRFGIQKMDKSILMLASFERTADHLFNAAVNGRDDKIEGVTECIIMGIPMQIG 1370
Query: 415 TGILKLRQRVEKLPELKYASDPII 344
TGILK+ QRV+ P L+Y DP++
Sbjct: 1371 TGILKVIQRVDPPPMLRYGPDPVL 1394